KEGG   Penicillium oxalicum: POX_b02102
Entry
POX_b02102        CDS       T09521                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
pou  Penicillium oxalicum
Pathway
pou03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pou00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    POX_b02102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pou03041]
    POX_b02102
Spliceosome [BR:pou03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    POX_b02102
 Complex C
   U5 SnRNP specific factors
    POX_b02102
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_NOL10_N Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 74434424
NCBI-ProteinID: XP_049971365
LinkDB
Position
II:509717..511075
AA seq 359 aa
MSGEKRPAPEGFAHSSQLVVKRKKSDADLHPGNAVVKSSSQNGALIQSIPRTSGLEAPII
ELTGHSGEVFTVRFDPTAQHIASGSMDRSILLWNTYGQCDNYGQLSGHKGAVLDLQWARD
SRALFSASADMTLGSWDVETGTRVRRHMGHEEIINCLDISKRGQELLVSGSDDGCIGIWD
PRQKDALEYLETELPITAVALSEAGNEIYSGGIDNTIHVWDLRKKAIVYSMAGHTDTITS
LEISPDSQSLLSNSHDSTVRTWDIRPFAPTNRMIRTFDGAPVGIEKNLIRASWDPKGGKI
AAGSGDRSVVVWDANSGKLLYKLPGHKGTVNDVRFSPNEEPIIVSCSSDRNLMLGELGK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtcaggagaaaaacgtcccgctccggagggctttgcgcactcgagccagcttgtcgtc
aagcgaaagaagtccgatgccgaccttcaccccgggaacgcggtcgtaaagagctcgtcg
caaaatggcgcactcattcaatcgattcctcgaacgagtggacttgaggcgccgattata
gaactaacagggcattctggtgaagttttcactgtacgattcgatccgacagctcagcat
attgcgtccggctccatggaccgatctattttactttggaacacatacggacaatgcgac
aactacggtcaactgtcaggccacaaaggagctgttctcgatctccaatgggcccgcgat
tcccgagcacttttctccgcctccgccgatatgaccttggggagttgggatgtggaaact
ggaacccgtgttcgccgccacatgggtcatgaagagatcatcaattgcttagacatcagc
aagcgtggtcaagaactactcgtcagtggtagcgatgatggttgcattggaatttgggac
ccgcgacaaaaggacgcactggaataccttgagaccgagttgcctattaccgcagttgcg
ttgtccgaggccggcaacgaaatttacagtggcggcattgacaacaccattcacgtttgg
gatttgcgcaagaaagcaattgtatactccatggctggacacaccgacaccattacctcc
ctcgaaatctcgccagactcccaatctctcttatctaattctcacgactctacggtgcga
acatgggatatccgtcctttcgcacctacgaaccgcatgattaggacgttcgacggtgct
cctgttggtattgagaagaatttgatccgcgccagctgggatcctaaaggcgggaagatc
gccgcgggcagtggtgaccggagtgtggtggtttgggatgccaactcgggcaagttgcta
tacaaattgcctggtcacaagggcacagtcaacgatgttcgcttctcgcccaacgaagag
ccgatcattgtgtcatgttcctctgatcggaacctcatgctgggcgaattggggaaatga

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