Penicillium oxalicum: POX_b02205
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Entry
POX_b02205 CDS
T09521
Name
(RefSeq) General transcription and DNA repair factor IIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pou
Penicillium oxalicum
Pathway
pou03022
Basal transcription factors
pou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
POX_b02205
09124 Replication and repair
03420 Nucleotide excision repair
POX_b02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pou03021
]
POX_b02205
03400 DNA repair and recombination proteins [BR:
pou03400
]
POX_b02205
Transcription machinery [BR:
pou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
POX_b02205
DNA repair and recombination proteins [BR:
pou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
POX_b02205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
74434524
NCBI-ProteinID:
XP_049971465
LinkDB
All DBs
Position
II:complement(896145..897721)
Genome browser
AA seq
479 aa
AA seq
DB search
MAASTSRPLEYLESLPGMTFNKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPTHD
LELWVKAESKKQRDNALSILGRLHILSKTLTSENVSAYMVTNPFASSLRKALMGSEDAQS
FGVFSVVQNEHRVSIPELDEYARRQWEGVLGYMVGTSALSGQRDVSLSKGVKQLLQAGHL
VEIRDRRVDITKDGFGFVLQDVNTQVWHILILYVESAEAIGMDSVEVLSFLFLLSSLELG
QSYEKKYLSSVQLRTLADLADFGIIYQESPEATRFYPTRLATTLTSDSSALSSTVGSSLN
GPASQPGASGAGSGFIVIETNYRLYAYTSSPLQISLISLFTTLKYRFPNLVTGKVTRQSV
RRAIDMGITADQIISYLHTHAHPQLRKHNAGHSTSNTAGIPPSILPPTVTDQIRLWQLER
DRLRATAGFLFKDFTTLQEYQAPCQYAAEIGVLVWKSDRKRMFFVTRHEQVAAFLRSKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatctacgtctcggcccctcgagtacctggaaagcctgcctggtatgaccttt
aacaagctgtatcaacagccgtctactgcgcttgcgatttttcggcgaatgttgcctgac
ctggcaaaatgctttgtgatggcacttttgtacctgaaagatcccctaccgacccacgac
ctggaactctgggtgaaagcagagagcaagaagcaacgcgataatgccctctctattttg
ggtcgccttcatattctttccaagactttgacttccgagaatgtcagcgcatacatggtc
accaatccgttcgcatcctcccttcgaaaagctctcatgggctccgaagacgctcagtcc
tttggtgtcttttctgttgtccagaatgagcaccgtgtgtcgatacccgaattagatgaa
tatgcgcgtcgtcaatgggaaggtgtattgggctacatggttgggaccagtgctctcagc
ggccagcgcgacgtgagcctcagcaagggtgtcaagcaacttcttcaggctggtcacctc
gtcgagattcgcgatcgacgagtcgacatcaccaaggacggctttggcttcgtcctgcag
gatgtcaatacgcaagtctggcatatcttgatcctctacgttgagagtgccgaggctatt
ggcatggacagtgttgaagttctctcgttcttgttcctgctcagtagtttggagctgggt
caatcttacgagaagaaatatctgtcatctgttcagcttcggacgctagctgacctcgcc
gattttggaattatctaccaagagtcgcctgaagcaacgcgattctaccccacgcgactg
gcgaccacactgacctcggattcaagcgctctgagcagtacggtgggtagctccttgaac
ggccctgccagccagcccggcgcatccggtgctggctccggattcatcgtcatcgaaacc
aactatcgcctctacgcatacacctcgtcgcccctgcaaatttcgctcatctccctcttc
actaccctcaagtatcgctttccgaatctcgtcacgggtaaagtcacccgccagtccgta
cgccgcgccatcgatatgggcattactgcggatcaaatcatctcctatctccatacacat
gcacatcctcaactgcgtaagcataatgccggccattcgacctcgaacaccgcaggtatc
ccaccgtctattctaccaccaacagtcacggatcagatccgactgtggcagctggaacgc
gaccggctccgcgctactgcgggctttctcttcaaggatttcacgacattgcaagaatac
caagctccctgtcaatatgcggcggaaatcggtgtcttggtatggaaatccgatcgcaag
cgcatgttctttgtgacccgacacgaacaggttgctgcattcctccgcagcaagaagtag
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