Penicillium oxalicum: POX_c03710
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Entry
POX_c03710 CDS
T09521
Name
(RefSeq) General transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pou
Penicillium oxalicum
Pathway
pou03022
Basal transcription factors
pou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
POX_c03710
09124 Replication and repair
03420 Nucleotide excision repair
POX_c03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pou03021
]
POX_c03710
03036 Chromosome and associated proteins [BR:
pou03036
]
POX_c03710
03400 DNA repair and recombination proteins [BR:
pou03400
]
POX_c03710
Enzymes [BR:
pou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
POX_c03710
Transcription machinery [BR:
pou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
POX_c03710
Chromosome and associated proteins [BR:
pou03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
POX_c03710
DNA repair and recombination proteins [BR:
pou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
POX_c03710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
Motif
Other DBs
NCBI-GeneID:
74436005
NCBI-ProteinID:
XP_049970156
LinkDB
All DBs
Position
III:complement(652077..654654)
Genome browser
AA seq
794 aa
AA seq
DB search
MKFFIDDLPVLFPYPRVYPEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTISLLSLIVAYQ
QHYPEHRKLIYCSRTMSEIEKALAELKGLMKYRTKELGQAEEFRALGLTSRKNLCLHPSV
KREKSGTVVDARCRSLTAGFVKEKKERGEEVDLCIYHENLDLLEPHNLVPPGVFTLDGLT
RYGEEHKQCPYFSARRMMPWCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDN
VCIESLSIDLSEDSLRKATRGATNLERKIEEMKSTDAEKLQNEYSKLVEGLQQAEQAREE
DQFIANPVLPDDLLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVTHTISETPPSFLTHL
KDLTYIERKPLRFCAERLTSLVRTLELVNIEDYQPLQEVATFATLVATYDKGFVLILEPF
ESEAATVPNPILHFTCLDAAIAIKPVLDRFSSVIITSGTLSPLEMYPKMLGFTTVMQESY
SMTLARRSFLPMIVTRGSDQAQISSSFGIRNDPGVVRNYGTLVTEFARITPDGVVVFFPS
YLYMESIISMWQGMGILDQIWNYKLILVETPDAQESSLALETYRTACCNGRGAILFCVAR
GKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEFLRENYRIRENDFLSFDAMRHAA
QCLGRVLRGKDDYGVMVLADRRFERKRPQLPKWINQAMLDSETNLSTDMAVANAKSFLRT
MAQPFKSKDQEGISTWSLADIERHEAKRKVEEARMMHGDIDPAYQTNQIPSTLAIIEDEY
DDDIDEDLLMLDAQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttcatcgatgaccttccggtgctgtttccgtaccctcgcgtctatcctgag
caatatgcatacatgtgcgatctcaaaaagaccctcgatgccgggggtcattgcgtgctg
gagatgccctctggaactggaaagacaatctcactgttgtcattgattgttgcctatcag
cagcattacccagagcaccgaaagctgatctattgctcacgtactatgtccgagattgag
aaggcactagcggagttgaagggactgatgaagtatcggacgaaggagctcggccaggcg
gaagaattccgtgcgcttggacttaccagtcggaagaatctttgcctgcatccctcggtc
aaacgagagaaaagtggcactgtggtcgacgcaaggtgccgaagcttgacagcgggtttt
gtgaaggagaagaaagaaagaggagaggaggttgatctgtgcatctatcacgagaatctc
gacctccttgaaccgcataacctagtcccccccggtgtgttcactctagacggcttgacc
cgttatggagaggaacacaagcaatgcccctacttctctgctcgccgtatgatgccatgg
tgcaacgtcattatttactcatatcactacctgctcgacccgaagattgccgagcgtgtc
tcacgggagctgtccaaggattgcatcgtagtctttgacgaggctcataacattgacaac
gtctgcattgaatcgctgagtatcgacctgagtgaggattctctccgcaaggccaccaga
ggtgccacgaatctggagcggaaaatcgaggagatgaagagcacagacgccgaaaagctc
cagaacgaatactcgaaactcgtggagggcttacagcaagcggaacaggcgagagaagag
gatcaattcatcgcgaacccagtactaccagacgaccttttaaaagaggccgtgccaggc
aacattcgacgtgcagagcactttgtgtcgttcttgaaacgattcatcgaatatctgaaa
actcgaatgaaagtgacccacacgatttccgaaacaccaccatcgtttctcacccatctg
aaggacctgacctatattgagcgaaagccactgagattttgcgcagagcggctcacttcg
cttgttcgaaccctcgaacttgtcaatatcgaagattaccaaccactccaggaagtggct
acttttgcgaccttggtcgcgacttatgacaaaggttttgtcctcattctggaacctttt
gagtccgaagcagctacggtccccaacccgattttgcatttcacttgcttggatgccgct
attgccatcaagccagtgcttgaccggttcagctccgtcatcatcacttctggtacccta
tcgccgttggagatgtaccccaaaatgctcggatttacgactgtgatgcaggagtcatat
agtatgacacttgcccgtcggtccttcttgcctatgattgtcacccggggctccgaccaa
gcccaaatctcctcatcgtttggtattcgcaatgaccctggcgtggttcgaaattacggc
actcttgtcaccgaattcgcacgcattacgccggatggcgtcgttgtattcttcccctcg
tatctttacatggaatcgatcatcagcatgtggcagggcatgggtatcttggatcagatc
tggaattacaagctaattctcgtcgaaacacctgatgcgcaagaatcttcactcgctttg
gagacctatcgaactgcgtgttgcaacggacgtggggcgatattgttctgtgtcgctcga
gggaaagtttctgagggtattgattttgaccatcattacggacgcgctgtgctttgtata
ggcgtccccttccagtacaccgagtcccgcatcttgaaggcgcggcttgaattcctacga
gaaaattatcgcattcgagagaacgacttcctctccttcgacgccatgcgacacgctgcg
cagtgtttgggtcgtgtgcttcgaggaaaagatgattacggggtcatggtgctagctgat
cgccgattcgagagaaaacgaccccagcttccaaaatggatcaaccaggccatgttggac
agtgaaaccaatctcagtacggacatggccgtggccaacgccaaaagcttcttacgtacg
atggcacagccgttcaaatccaaggatcaagaagggatctctacctggagcctggctgat
attgagcgccatgaagcgaagcgcaaggtcgaggaagcccgtatgatgcatggagatatt
gatcctgcctatcaaacgaatcaaattccctcgactttggcgatcatcgaagacgaatat
gacgacgacatcgatgaagatcttctgatgctggatgcccaatga
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