Penicillium oxalicum: POX_c03753
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Entry
POX_c03753 CDS
T09521
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pou
Penicillium oxalicum
Pathway
pou03018
RNA degradation
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_c03753
09123 Folding, sorting and degradation
03018 RNA degradation
POX_c03753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pou03019
]
POX_c03753
03041 Spliceosome [BR:
pou03041
]
POX_c03753
Messenger RNA biogenesis [BR:
pou03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
POX_c03753
mRNA degradation factors
5'-3' decay
Lsm complex
POX_c03753
Spliceosome [BR:
pou03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
POX_c03753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
DUF6897
Motif
Other DBs
NCBI-GeneID:
74436048
NCBI-ProteinID:
XP_049970199
LinkDB
All DBs
Position
III:complement(775380..775989)
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AA seq
126 aa
AA seq
DB search
MSERGSFRGGRGGGGGGRGGRQQQKTGGAAQQEKPKKENILDLGKYMDKEVQVKFNGGRE
VTGTLKGYDQLMNLVLDDVKETMRDDAGNQTTRALGLIVARGTLIVLISPADGSEEIANP
FVQPEE
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcgaggctcgttccgcggcggtcgcggtggaggtggtggtggccgcggcggt
cgccagcagcagaaaaccggcggtgccgcgcaacaagagaagcccaagaaggagaatatc
ctcgatttggggaaatatatggacaaggaggtccaggtgaaattcaatggtggccgtgaa
gtcaccggtaccctcaagggatatgatcaattgatgaacctagtcctggatgacgtcaag
gagacgatgcgcgatgacgcgggcaaccagaccacccgtgcattgggtctgattgtggct
cgtggtactctaatcgtcctcatttcaccagcagatgggagtgaggagattgccaaccct
ttcgtccagcctgaggagtaa
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