Penicillium oxalicum: POX_d05271
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Entry
POX_d05271 CDS
T09521
Name
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pou
Penicillium oxalicum
Pathway
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_d05271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pou03041
]
POX_d05271
03009 Ribosome biogenesis [BR:
pou03009
]
POX_d05271
Enzymes [BR:
pou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
POX_d05271
Spliceosome [BR:
pou03041
]
Complex A
U2 snRNP components
U2 related factors
POX_d05271
Complex B
POX_d05271
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
POX_d05271
Ribosome biogenesis [BR:
pou03009
]
Eukaryotic type
90S particles
Helicases
POX_d05271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
AAA_7
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
74437524
NCBI-ProteinID:
XP_049969070
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All DBs
Position
IV:1392095..1394501
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AA seq
757 aa
AA seq
DB search
MVDRRSDSDDGARAKRQKMDAGDPRENPYLAHMYEDSNGADASSVLAKFKRHQTTASLAM
KAEDGNINPFSGQPFSTKYFSILKSRRDLPVHQQRDEFLQLYQQSQILVFVGETGSGKTT
QIPQFVLFDDLPQNQRKMVACTQPRRVAAMSVAQRVAEEMDVRLGEEVGYSIRFEDKTGP
KTILKYMTDGMLLREAMHDHNLSRYSTIMLDEAHERTMATDVLMGLLKEVVQRRPDLKII
IMSATLDAQKFQRYFMDAPLLAVPGRTHPVEVFYTPEPEQDYVEAAIRTVLQIHATEDEG
DILVFLTGEEEIEDAARKISMEAEEMVREADAGPLKVYPLYGSLPPHMQQRIFDPAPAPL
RKGGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQ
QRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDL
MDPPAPETLMRALEELNYLACLDDDGNLTELGRLASDFPLDPALAVMLISSPEFYCSNEI
LSITALLSVPQLFVRPNSQRKRADEMKNLFAHQDGDHLTMLNVYHAFKSPEAQANPKQWC
HDHFLSLRSLQSADNVRMQLLRIMERSELEMISTPFEDKKYYENIRRALCAGFFMQVARK
ESQGKSVYTTIKDNQNVLLHPSTVLAHDAEWVLYNEFVLTTKNYIRTVTAVKPEWLLDIA
PTYYDPSSFPKGETQTALLRARDRLARKEKMRAEKRR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaccgccgatcagactcagacgatggtgcgcgcgccaagcgtcagaaaatggat
gccggcgatcccagggagaatccctacctggctcatatgtacgaggattccaatggcgca
gacgcaagctctgtcctggccaaattcaaacgccaccagacgacggcgtctctagccatg
aaggccgaggatggcaatatcaatccgttcagcggtcagcccttctcgaccaagtatttt
tctattttgaagtctcggcgcgatttgccagtccatcagcagcgtgatgaattccttcag
ctataccaacaatcccagatcttggtctttgttggtgaaaccggttccggaaagacaacg
cagattcctcaatttgttctgttcgatgacctgccgcagaaccaacgcaaaatggtcgct
tgtacacagccgcgtcgtgtcgcagccatgtcggtggctcagcgtgtcgcagaggaaatg
gatgttaggcttggagaagaagtcggttacagcattcgtttcgaggacaagacaggcccc
aagacgatcctcaagtacatgaccgatggtatgctcctgcgagaggcgatgcacgatcac
aatctgtctcggtacagcacaatcatgctcgacgaagcccacgaaagaacaatggccaca
gatgtcctgatgggtctgttgaaggaggttgtgcagcgtcgaccggatttgaagatcatc
atcatgtccgctaccttggatgcacaaaagttccaacggtatttcatggatgcgcccctt
ctcgccgtccctggacgtacccaccccgtcgaggttttctacactccggagcctgaacaa
gactacgtcgaggcagccattcggacagtcttgcagattcatgccacggaagacgagggt
gatattcttgtgtttttgactggtgaagaagaaatcgaagatgctgcccggaaaatcagt
atggaggctgaggaaatggtgcgcgaggccgatgccggtccactgaaggtttatccgctt
tacggcagtctgccacctcacatgcagcagcgcattttcgaccctgcgccagctcctctc
cgtaagggtgggcgacctggtcgaaaggtcatcatctctacaaacattgccgaaacctcc
ctgaccatcgacggtatcgtgtatgtggtggatcctggattttccaagcagaagatttac
aaccctcgcattcgtgttgaatcccttctcgtctctcctatttccaaggcctctgctcag
cagcgtgctggtcgtgccggtcgtacacgaccaggaaaatgcttccgtctgtacacggag
gaagccttcaagaaggaactgattgagcagacttacccggaaattcttcggtccaatttg
tcgtcaactgttctcgagttgaagaagctgggaattgacgaccttgtccacttcgacttg
atggacccgccagctcctgaaactctgatgcgagcccttgaagagctcaactaccttgcc
tgtctggacgacgatggaaatttgaccgagcttggccgactggcttccgatttccctctc
gacccggctcttgctgtaatgctgatcagctcaccagagttctattgctccaacgagatc
ctctctattaccgcccttctctctgttccccagctctttgttcgtcctaattcgcagcgc
aagcgcgcggacgagatgaagaacttgtttgcgcatcaagatggtgaccatctcactatg
ctgaacgtctatcacgccttcaagagccccgaggcccaggcaaatcccaaacaatggtgc
catgaccacttcctttcccttcgttcccttcaatcggccgataacgtgcggatgcaattg
cttcgcatcatggagcgatcggagcttgagatgatttcgacaccttttgaagacaagaag
tattacgagaatatccgccgcgctctttgcgccggtttctttatgcaagtggccagaaag
gagtcccagggcaagagcgtgtacacaacaatcaaggacaaccagaatgtcctgttacac
ccttcgacagtactagctcacgacgccgagtgggtcctgtacaatgagttcgttctgaca
acgaagaactacattcgcacagttactgcagtcaagcctgagtggttgctggacattgca
cccacttactatgatccttcctccttcccgaagggtgagacgcagactgctctccttcgc
gctagagacagacttgcgcgcaaggagaagatgcgtgccgaaaagcgacgatag
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