Penicillium oxalicum: POX_d05297
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Entry
POX_d05297 CDS
T09521
Name
(RefSeq) Pre-mRNA-splicing factor syf1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pou
Penicillium oxalicum
Pathway
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_d05297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pou03019
]
POX_d05297
03041 Spliceosome [BR:
pou03041
]
POX_d05297
Messenger RNA biogenesis [BR:
pou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
POX_d05297
Spliceosome [BR:
pou03041
]
Complex B
Other components
Prp19-related factors
POX_d05297
Complex C
POX_d05297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
Mad3_BUB1_I
TPR_15
SNAP
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
74437550
NCBI-ProteinID:
XP_049969096
LinkDB
All DBs
Position
IV:complement(1492221..1495006)
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AA seq
845 aa
AA seq
DB search
MPGTLLPPRSHRQHAEMDRPSASQPDFYLITDQDTVYEQDLLRDAGSVKPWLAYIEFKQQ
NGTLYEQAFVMERACRKLPRSYKLWKMYLEFRTKHLKGRNPVVYRAEYVKVNALFEQALV
LLNKMPRIWEMYLSFLLLQPLVTHTRRTFDRALRALPVTQHNRIWRLFKGFARSVSGPTA
VKIWARYMQIHPENAEDYIDVLVEMGQYTDAIKVYMEILDNQRFQSKNGKSNFQLWTEMV
DLLVSKAKKIETGPHIGIDVDAILRSGIEKFADQRGKLWAGLATYWITKGSFEKARDVFE
EGITTVMTVRDFTLIFDTYVEFEESIIGNLMDAAAVRSEKGKVDEEADFDLDLRMLRFEQ
LMDRRPFLVNDVLLRQNPHNVIEWEKRVALWGDNKQEAVNTYTAAIAAINPKKAHGKFSE
LWVNYAKLYEEGKDLDTARVIFEKAVKVPFKSVAELAETWCEWAEMELRAENFDRAVDIM
AKATQAPKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLEETRKVYERIFELRI
ATPQTVVNYANLLEENNYFEDSFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLR
DLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATREVSDEDRFEMFEFYIT
KSASNFGLTSTRPIYERAVAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQRTQPDA
GGHGDEDTERADAMAALEREARAPVGFVAASTGPEGGNRPPASGKEQPAPPANPDAIDLD
DDMDD
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgccagggacgcttttgcccccgagatcgcaccggcagcacgcagagatggatcggcca
tctgcgtcccagcctgacttctacctgattacagaccaggacacggtctatgaacaggat
ttgctgcgtgatgcaggcagtgtcaagccatggcttgcgtacattgaattcaagcaacaa
aatggcacactttacgaacaagcttttgtcatggagcgagcatgccgcaagctgccacga
tcatacaagttgtggaaaatgtatctagaattccggacgaagcacctaaaaggtcgaaac
ccagttgtctaccgtgccgagtacgtcaaagttaatgctttgttcgaacaagcgttggtc
cttttgaataagatgcctcgcatctgggagatgtacttgtcattcctacttctccagcct
ttggttacacacactcgacgaacatttgatcgcgctctccgcgcattgcctgtcacccag
cacaaccgaatttggcgactcttcaagggattcgcacgatctgtatctggccctactgca
gtcaagatctgggctcgatacatgcaaatccaccctgaaaacgcagaagattacatcgat
gtgctggtcgagatgggacaatacacggatgccattaaggtgtacatggaaattttggac
aatcaacgattccagtccaagaatggcaaaagcaatttccagttgtggacggagatggtc
gatcttctggtgtccaaggccaaaaagattgaaactgggcctcatattggcattgacgtg
gatgcgattctccgcagcggaatcgaaaaatttgcggaccagcgaggaaaattatgggct
ggtcttgccacttactggatcaccaagggtagctttgaaaaggcccgtgacgtgttcgaa
gaagggatcactactgtgatgacagtccgtgacttcactttgatattcgatacctacgtc
gagtttgaggagtcaattatcggtaatctcatggatgctgctgctgtgcgttcagaaaaa
ggcaaggtcgacgaggaagccgattttgacctcgatcttcgcatgttgaggtttgagcag
ctgatggaccgacgtccattccttgtcaacgatgtcctcttgcgacagaatccacacaac
gtgatcgagtgggagaagcgagtggctctgtggggtgacaataagcaagaagccgtcaac
acctacacagccgctatcgcggcaatcaacccgaagaaggcgcatggcaagttctcggag
ctctgggtcaattatgccaaactttatgaagaagggaaagacctggatactgcaagggtc
atctttgagaaagctgtcaaggttcccttcaaatccgtcgctgaactggcagagacctgg
tgtgagtgggcggagatggaacttcgcgctgagaactttgacagagccgttgatattatg
gccaaggcaactcaagcaccgaaaaaatctactgtggattactttgacgagactctctca
ccacaacaacgggtccacaagagctggaagctatggagtttctatgttgaccttgtcgaa
agtgtttcctcgttggaagagacccggaaggtctacgagcgcatttttgaactgcgcatt
gctactccccagaccgtggtgaattacgccaatctgttggaggagaataactacttcgaa
gactcattcaagatctacgagcggggactggatcttttcagctatccggtcgccttcgaa
ttatggaatctgtacctcacaaaagccgtggaccgcaagattggcattgaacgccttcgt
gatctcttcgagcaagccctggatggatgcccgccaaaatttgccaaacctctctacctg
atgtatggtaacctggaggaggagcgaggacttgctcgacacgcgatgcgcatctatgag
cgagcgacgcgagaggtgtctgatgaggaccggtttgagatgtttgaattttacatcacc
aaatctgcctctaactttggtctcacttccactcgaccaatctacgagcgagctgtcgcc
gccttgcccgaccaggaggccaaagaaatgtgcctcaaatttgccgagatggagcgccga
cttggtgaaattgatcgggcgcgagccatctatggccatgcatctcagttctgtgatcct
cgaaccaatgcgcccttctggcagaaatgggaagctttcgaagtgcagcatggtaatgag
gacactttcaaggagatgctccgtatcaagagaagtgtccaggctcaatacaacaccgat
gtcaactttatcgcttcgcaggccatcgctcgcagccagcagcgtacccagccagatgcg
ggtgggcatggcgatgaggacacagagcgtgccgacgcgatggctgcgcttgagcgtgag
gctcgtgctcctgtgggctttgtcgctgctagcaccggacctgaagggggtaatcgccct
ccagcttcaggcaaagaacaacctgccccgccggcgaatccagacgccattgatcttgac
gatgatatggatgattag
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