KEGG   Penicillium oxalicum: POX_d05297
Entry
POX_d05297        CDS       T09521                                 
Name
(RefSeq) Pre-mRNA-splicing factor syf1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
pou  Penicillium oxalicum
Pathway
pou03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pou00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    POX_d05297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pou03019]
    POX_d05297
   03041 Spliceosome [BR:pou03041]
    POX_d05297
Messenger RNA biogenesis [BR:pou03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     POX_d05297
Spliceosome [BR:pou03041]
 Complex B
  Other components
   Prp19-related factors
    POX_d05297
 Complex C
    POX_d05297
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_8 Mad3_BUB1_I TPR_15 SNAP ARM_TT21_C
Other DBs
NCBI-GeneID: 74437550
NCBI-ProteinID: XP_049969096
LinkDB
Position
IV:complement(1492221..1495006)
AA seq 845 aa
MPGTLLPPRSHRQHAEMDRPSASQPDFYLITDQDTVYEQDLLRDAGSVKPWLAYIEFKQQ
NGTLYEQAFVMERACRKLPRSYKLWKMYLEFRTKHLKGRNPVVYRAEYVKVNALFEQALV
LLNKMPRIWEMYLSFLLLQPLVTHTRRTFDRALRALPVTQHNRIWRLFKGFARSVSGPTA
VKIWARYMQIHPENAEDYIDVLVEMGQYTDAIKVYMEILDNQRFQSKNGKSNFQLWTEMV
DLLVSKAKKIETGPHIGIDVDAILRSGIEKFADQRGKLWAGLATYWITKGSFEKARDVFE
EGITTVMTVRDFTLIFDTYVEFEESIIGNLMDAAAVRSEKGKVDEEADFDLDLRMLRFEQ
LMDRRPFLVNDVLLRQNPHNVIEWEKRVALWGDNKQEAVNTYTAAIAAINPKKAHGKFSE
LWVNYAKLYEEGKDLDTARVIFEKAVKVPFKSVAELAETWCEWAEMELRAENFDRAVDIM
AKATQAPKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLEETRKVYERIFELRI
ATPQTVVNYANLLEENNYFEDSFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLR
DLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATREVSDEDRFEMFEFYIT
KSASNFGLTSTRPIYERAVAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQRTQPDA
GGHGDEDTERADAMAALEREARAPVGFVAASTGPEGGNRPPASGKEQPAPPANPDAIDLD
DDMDD
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgccagggacgcttttgcccccgagatcgcaccggcagcacgcagagatggatcggcca
tctgcgtcccagcctgacttctacctgattacagaccaggacacggtctatgaacaggat
ttgctgcgtgatgcaggcagtgtcaagccatggcttgcgtacattgaattcaagcaacaa
aatggcacactttacgaacaagcttttgtcatggagcgagcatgccgcaagctgccacga
tcatacaagttgtggaaaatgtatctagaattccggacgaagcacctaaaaggtcgaaac
ccagttgtctaccgtgccgagtacgtcaaagttaatgctttgttcgaacaagcgttggtc
cttttgaataagatgcctcgcatctgggagatgtacttgtcattcctacttctccagcct
ttggttacacacactcgacgaacatttgatcgcgctctccgcgcattgcctgtcacccag
cacaaccgaatttggcgactcttcaagggattcgcacgatctgtatctggccctactgca
gtcaagatctgggctcgatacatgcaaatccaccctgaaaacgcagaagattacatcgat
gtgctggtcgagatgggacaatacacggatgccattaaggtgtacatggaaattttggac
aatcaacgattccagtccaagaatggcaaaagcaatttccagttgtggacggagatggtc
gatcttctggtgtccaaggccaaaaagattgaaactgggcctcatattggcattgacgtg
gatgcgattctccgcagcggaatcgaaaaatttgcggaccagcgaggaaaattatgggct
ggtcttgccacttactggatcaccaagggtagctttgaaaaggcccgtgacgtgttcgaa
gaagggatcactactgtgatgacagtccgtgacttcactttgatattcgatacctacgtc
gagtttgaggagtcaattatcggtaatctcatggatgctgctgctgtgcgttcagaaaaa
ggcaaggtcgacgaggaagccgattttgacctcgatcttcgcatgttgaggtttgagcag
ctgatggaccgacgtccattccttgtcaacgatgtcctcttgcgacagaatccacacaac
gtgatcgagtgggagaagcgagtggctctgtggggtgacaataagcaagaagccgtcaac
acctacacagccgctatcgcggcaatcaacccgaagaaggcgcatggcaagttctcggag
ctctgggtcaattatgccaaactttatgaagaagggaaagacctggatactgcaagggtc
atctttgagaaagctgtcaaggttcccttcaaatccgtcgctgaactggcagagacctgg
tgtgagtgggcggagatggaacttcgcgctgagaactttgacagagccgttgatattatg
gccaaggcaactcaagcaccgaaaaaatctactgtggattactttgacgagactctctca
ccacaacaacgggtccacaagagctggaagctatggagtttctatgttgaccttgtcgaa
agtgtttcctcgttggaagagacccggaaggtctacgagcgcatttttgaactgcgcatt
gctactccccagaccgtggtgaattacgccaatctgttggaggagaataactacttcgaa
gactcattcaagatctacgagcggggactggatcttttcagctatccggtcgccttcgaa
ttatggaatctgtacctcacaaaagccgtggaccgcaagattggcattgaacgccttcgt
gatctcttcgagcaagccctggatggatgcccgccaaaatttgccaaacctctctacctg
atgtatggtaacctggaggaggagcgaggacttgctcgacacgcgatgcgcatctatgag
cgagcgacgcgagaggtgtctgatgaggaccggtttgagatgtttgaattttacatcacc
aaatctgcctctaactttggtctcacttccactcgaccaatctacgagcgagctgtcgcc
gccttgcccgaccaggaggccaaagaaatgtgcctcaaatttgccgagatggagcgccga
cttggtgaaattgatcgggcgcgagccatctatggccatgcatctcagttctgtgatcct
cgaaccaatgcgcccttctggcagaaatgggaagctttcgaagtgcagcatggtaatgag
gacactttcaaggagatgctccgtatcaagagaagtgtccaggctcaatacaacaccgat
gtcaactttatcgcttcgcaggccatcgctcgcagccagcagcgtacccagccagatgcg
ggtgggcatggcgatgaggacacagagcgtgccgacgcgatggctgcgcttgagcgtgag
gctcgtgctcctgtgggctttgtcgctgctagcaccggacctgaagggggtaatcgccct
ccagcttcaggcaaagaacaacctgccccgccggcgaatccagacgccattgatcttgac
gatgatatggatgattag

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