Penicillium oxalicum: POX_e06862
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Entry
POX_e06862 CDS
T09521
Name
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pou
Penicillium oxalicum
Pathway
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_e06862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pou03041
]
POX_e06862
Enzymes [BR:
pou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
POX_e06862
Spliceosome [BR:
pou03041
]
Complex C
Other components
Step II factors
POX_e06862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
Flavi_DEAD
T2SSE
SRP54
ResIII
nSTAND3
AAA_30
AAA_23
ATPase
AAA_16
SLFN-g3_helicase
cobW
ABC_tran
AAA_7
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
74439082
NCBI-ProteinID:
XP_049968137
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All DBs
Position
V:complement(2406275..2409223)
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AA seq
925 aa
AA seq
DB search
MDRNGPGHGIPPAKRQRTGNSSYDHDQMWHREQLVKSGLAQQTGVQHAHYLAEDQEDTRV
HLSVHELRPPFLDGRTIFTTQLEPISAIRDPQSDMAVFSRKGSKVVRERRQQRERQKQAQ
DATTMAGTTLGNIMGVKEEEEGDSAMAAPVEEVYKRGGNKFAQHLKKEGGGSSAFSNSKT
LREQREYLPAFAVREDLLRVIRDNQVTIVVGETGSGKTTQLTQFLHEDGYSKFGMIGCTQ
PRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTSDKTVIKYMTDGVLLRESLAQADLE
KYSCIIMDEAHERGLNTDVLMGLLKKVLARRRDLKLIVTSATMNAERFSRFFGGAPEFII
PGRTFPVDVHFSRSPCEDYVDSAVKQVLTIHVSQGPGDILVFMTGQEDIEATCELVEERL
QLLNDPPKLSILPIYSQLPAEQQAKVFEKADKGVRKVIVATNIAETSLTIDGIMYVVDPG
YSKLKTYNPKMGMDSLQITPISQANANQRSGRAGRTGPGKAYRLYTEAAYKNELYIQTIP
EIQRTSLANTVLLLKSLGVKDLLEFDFMDPPSQEVMSTSLFELWALGALDNLGELTQLGR
RMTPFPADPALAKLIIMAAEVYGCSEEMLTIVSMLTVPHVFYRPREREEEADSAHEKFYV
HESDHLTLLHVFTQWKANGCSDRWCTRHFLHSKNLRQAREVRDQFQDIMTQQRMPLVSCG
TDWDVIRKCICSGFYHQAARRGGGSGSEKEYLNLRTSVSMYLSRSSALSGLADAPPFVVY
HELRLTAREYMSVVTAVDPEWLADLGGVFYSMKEKGYSQRDRRTKEREINKSMQIQQEMA
DARAMAARAKEAEKTLDTARRRNEVEVGGARSAVRRPVVIPGGKRQLPGSVSASSSASSR
PGAGTGGSTSSVVKKPIGRRRPGQF
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaacggacctggccatggcattccgccggccaagcgacaaaggacgggcaac
tcttcatatgaccatgatcaaatgtggcaccgcgagcagctggtcaagtctggtcttgcc
cagcagaccggagtccaacatgcgcactatcttgctgaagatcaagaagatactcgagtc
catttgagtgttcatgagctgcgacctccttttctcgatggccgcacaatctttactacg
caactggagccaatctctgcgattcgcgatccccagagtgacatggccgtgttcagtcgc
aagggaagcaaggttgtacgagaacgtcggcagcagagggaacgtcagaagcaggcacag
gatgcaacgacaatggcgggtacgactttgggcaatataatgggggtcaaggaagaggaa
gagggtgacagtgcgatggcagctcccgtcgaggaggtctacaagcgcggagggaacaaa
ttcgcccaacatctcaagaaggagggaggcggctctagtgcattcagcaatagtaagact
ttgcgcgagcagagagagtacctgcctgcctttgccgtgcgtgaagacctcctgcgagtg
atccgggacaatcaagtcacgatagttgtgggcgagactggctcgggcaagacgacgcaa
ttgacccaatttctccatgaagacggatactccaaatttggcatgataggttgcacgcaa
ccccgtcgtgtggcagccatgagtgtcgcgaagcgggtcagtgaagaaatggaggttgat
ctcggtgatctggtcggatatgccattcgatttgaagattgcaccagtgacaaaacggtt
attaagtatatgacggatggagtcctacttcgagaatccctggctcaagccgacctggag
aagtactcgtgcatcatcatggacgaagcgcacgagagaggtttgaacacggatgtgctc
atgggacttttgaagaaggtccttgctcgacgcagagacttgaaactgatcgtcacgtcg
gccacgatgaatgcagagcgtttctcccgctttttcggcggagcgccagagttcatcatt
cccggcagaacatttcccgtcgacgttcacttctctcgatcaccttgtgaagattatgtc
gacagcgcggtcaagcaggttttgactattcatgtctcacaggggccaggcgatatcctt
gttttcatgaccggacaagaggacattgaggcaacatgcgaactcgtcgaggaacgactg
cagctcctgaatgatcctcccaaactcagcattctaccgatttatagtcaattgccggca
gagcaacaggccaaggtttttgaaaaagcagacaaaggagtccgcaaagttatcgtggcg
accaatattgccgagacaagtttaaccattgacggaatcatgtacgttgtggatccgggc
tactcgaagctcaagacatacaaccccaaaatgggcatggacagccttcaaatcaccccg
atatctcaagcgaacgccaaccagcgatctggccgcgccggacgcacgggtcctggaaaa
gcttaccgcttgtataccgaggccgcgtacaagaacgagctctatattcagactattccg
gagatccagcgcaccagcttggccaatacagtcctcctgctcaaatcactcggcgtcaag
gatcttttggaatttgatttcatggaccctccatcacaagaagtgatgtctacttcgcta
ttcgaactgtgggctctcggagcactggacaacctgggagaactaacacaactcgggcgt
cgcatgacgccattccccgccgacccagctctagctaaacttatcatcatggccgcagag
gtctacggctgtagcgaggagatgctcaccatcgtatccatgctgaccgtaccgcacgtg
ttctatcgtcctcgggagcgcgaagaggaggccgattctgcccatgagaaattctacgtt
catgagtctgaccatctgacgctcctccacgtcttcacccaatggaaggcgaacggctgc
tccgatcgctggtgcacccgtcacttccttcattccaaaaatttgcggcaggccagggaa
gtccgtgatcaattccaggatatcatgacccaacagagaatgccgcttgtcagctgcggg
accgactgggacgtgatccgcaaatgcatttgctccggcttctaccatcaagctgcgcgc
cgtggcggtggtagcggttctgaaaaggaatatctcaatctgcgtaccagtgtctcaatg
tatctatcaagatcgagcgctttatccggactggccgatgccccaccctttgtcgtctac
catgagttgaggttgaccgcacgagagtacatgtccgttgtgacagccgtcgatcccgag
tggctcgccgatctcggtggtgtgttctactccatgaaagaaaaggggtattcgcagcgc
gatcgtcgcaccaaagagcgcgagatcaataaaagcatgcagattcagcaagagatggca
gatgctcgggccatggctgccagggccaaagaggccgagaagaccctcgatactgcccga
cgcaggaatgaagtcgaggttggcggagcacgatctgccgtgcgtcggccggtggtcatc
cccgggggaaagagacagcttccaggtagtgtgagtgcctcgtcatctgcgtcttcccga
cctggagctggcacgggcggttccacaagcagtgtggtgaagaagcccattgggaggagg
cggccaggacagttctga
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