Penicillium oxalicum: POX_e07194
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Entry
POX_e07194 CDS
T09521
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pou
Penicillium oxalicum
Pathway
pou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POX_e07194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pou03019
]
POX_e07194
Messenger RNA biogenesis [BR:
pou03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
POX_e07194
mRNA degradation factors
5'-3' decay
Lsm complex
POX_e07194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
74439408
NCBI-ProteinID:
XP_049968463
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All DBs
Position
V:3410993..3411833
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AA seq
197 aa
AA seq
DB search
MERLSLNETAGNAQQQQQQPQSQQQQQRPGQQNALGSAVPQVPPGPPQLPPQMFTTAAQL
LDLTDKKLVLVLRDGRKLIGVLRSWDQFGPRPDGHKRLPSLANLVLQDTIERIYAGNLYA
DVPRGIFLVRGENVLLLGEVDLDREDDIPSSVTKAPFEEVFELKKKEDSRRKATDKKRHG
ELQALGFEPEHSGEILF
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggagcgattatcactcaacgagacggctggcaacgcgcagcagcagcaacagcagcca
caatcgcaacagcaacaacagaggcccggacaacagaatgcgcttggttctgcggttcct
caagttccgccaggccctccacaacttcccccgcagatgtttacgaccgccgctcagtta
ctcgatttgactgataaaaaacttgtactggttctgcgcgacggaaggaaattgataggt
gtgctccgaagctgggatcaatttggaccgcgtcccgatgggcacaaacgcctcccttct
ctagcaaacctcgttcttcaagatacgattgagagaatctatgctggcaatctatatgcg
gatgttccccgcgggatcttcctcgtgcgaggcgagaacgtgctgctgctgggcgaagtg
gatctggaccgtgaagatgacatcccttcctccgtgaccaaggctccatttgaggaagtt
ttcgaattgaagaaaaaggaagatagccggcgcaaggcaactgataagaagcgacatggg
gagctgcaggcactgggctttgagcctgagcacagtggcgagattttgttctaa
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