Penicillium oxalicum: POX_f07821
Help
Entry
POX_f07821 CDS
T09521
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pou
Penicillium oxalicum
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pou03019
]
POX_f07821
03041 Spliceosome [BR:
pou03041
]
POX_f07821
03036 Chromosome and associated proteins [BR:
pou03036
]
POX_f07821
Enzymes [BR:
pou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
POX_f07821
Messenger RNA biogenesis [BR:
pou03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
POX_f07821
mRNA cycle factors
Common to processing body (P body) and stress granule
POX_f07821
Spliceosome [BR:
pou03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
POX_f07821
Chromosome and associated proteins [BR:
pou03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
POX_f07821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
74440020
NCBI-ProteinID:
XP_049966754
LinkDB
All DBs
Position
VI:1504134..1506220
Genome browser
AA seq
669 aa
AA seq
DB search
MADGLQMGNLSLQDSQHAPQGGPPGRAAYIPPHLRGRNAGASVGGPAPPPGPAAGFSGPR
DARGRVGNWANANAPNFSPRGPANGKPSWNPNAQDVPLRPFDPYAYGHPGHGGSYGGGGN
FASGGGGGAARGSGDGQWRDGKHIPGPANPRLERELFGLGQDDPSKQHTGINFANYDDIP
VEASGQDVPEPVNAFTNPPLDDHLISNIKLASYVTPTPVQKYSIPIVMGGRDLMACAQTG
SGKTGGFLFPILSQAFQTGPSAAPQQAGGGQFYGRQRKAYPTSLILAPTRELVSQIFDEA
RKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLVL
DEADRMLDMGFEPQIRRIVEGEDMPRVEDRQTLMFSATFPRDIQMLARDFLKDYIFLSVG
RVGSTSENITQKIEYVEDADKRSVLLDILHTHGTTGLTLIFVETKRMADSLSDFLINQRF
PATAIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYV
HRIGRTGRAGNTGIATAFFNRGNRGVVRELIDLLKEAHQEVPSFLESIAREGSGYGGRGG
RSGRGRGSSNATRDVRRFGGGMGGQSSFGGNAYGGAPSFGGSGGYGGCSFVRWPRRCWLR
WWCRWLRWR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggacttcagatgggcaacctgtccctccaggactctcaacacgctccccag
ggcggaccccccggtcgtgctgcttacattcctcctcacctccgcggacgcaacgccggc
gccagcgtgggtggccctgcccctcctcctggacctgctgctggtttctctggccctagg
gacgcccgtggccgcgtcggtaactgggctaacgctaatgctcccaactttagtccccga
ggtcctgcaaatggtaagcccagctggaacccaaatgcacaagacgtgccactccggcca
ttcgatccatatgcttacggacatccaggacacggcggctcatacggcggtggtggtaac
tttgccagtggtggtggcggcggtgctgctcgcggctctggcgatggtcagtggcgcgat
ggcaagcacattcccggacctgcgaaccctcgtttggaacgtgagcttttcggtctgggt
caggacgacccctccaagcaacacaccggtatcaactttgccaactacgacgatatcccc
gttgaggcatcaggccaagatgtgcctgagcctgtcaacgccttcactaaccctcccctt
gacgaccacctgatctctaacatcaagcttgcaagctacgttactcccactcccgtccaa
aagtactctattcccattgtcatgggtggccgcgatttgatggcctgtgcccagaccggt
tccggaaagactggtggtttcttgttccccattctgtctcaggctttccagactggcccc
tctgccgctccccagcaggctggcggcggtcagttctatggccgtcaacgcaaggcctat
cccacctccctcattctcgcccctacccgtgagttggtttcccagattttcgacgaggct
cgcaagttcgcctatcgctcttgggttcgcccttgcgtcgtgtatggtggtgccgacatt
ggttcccaactgcgccagatcgagcgtggctgcgatcttctggttgccactcctggtcgt
ctcgtcgatttgattgagcgcggtcgtatctcgcttgtcaacatcaagtaccttgttctc
gacgaggctgatcgcatgctggacatgggtttcgaacctcaaattcgccgaattgttgag
ggtgaggatatgcctcgcgttgaggaccgtcagaccctcatgttctcagccaccttcccc
cgtgacatccagatgctggcgcgcgacttcctgaaggactacattttcctctcggtcggt
cgtgtcggttctacctctgagaacatcactcagaagatcgagtatgtcgaggacgccgac
aagcgttccgttctgttggacattctccacactcacggtactaccggtctgactctgatc
ttcgtcgagaccaagcgtatggccgactcgctttccgacttcttgatcaaccagcgattc
cccgccactgccattcacggtgaccgtactcagcgcgagcgtgagcgtgctctggaaatg
ttccgtaacggacgttgcccaatcttggtcgcgaccgctgtcgctgctcgtggtctcgat
atccctaacgtcacccacgtcatcaactacgacctgcccactgatattgatgactacgtt
caccgtatcggtcgtactggtcgtgccggtaacaccggtattgcgactgccttcttcaac
cgcggcaaccgtggtgttgtccgcgagttgatcgacttgctgaaggaggcccaccaggag
gttccctctttcctggagagcattgctcgcgagggtagcggctatggtggtcgtggtggt
cgcagcggacgaggccgtggtagctccaacgctacccgtgatgtccgtcgcttcggcggt
ggcatgggtggtcaatcctcctttggtggtaacgcctacggcggtgccccctcgttcggt
ggctctggcggctacggtggctgctccttcgtacggtggccccggcggtgctggctacgg
tggtggtgccggtggctacggtggcggtag
DBGET
integrated database retrieval system
