Penicillium oxalicum: POX_f08183
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Entry
POX_f08183 CDS
T09521
Name
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pou
Penicillium oxalicum
Pathway
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_f08183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pou03041
]
POX_f08183
Enzymes [BR:
pou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
POX_f08183
Spliceosome [BR:
pou03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
POX_f08183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
Cas3-like_C_2
PWI
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
74440369
NCBI-ProteinID:
XP_049967103
LinkDB
All DBs
Position
VI:<2714970..>2718326
Genome browser
AA seq
1118 aa
AA seq
DB search
MDNKTFVSDSLIRLTGASDPIAVDFVLAEASSAKSASALQDKLVSFLDGSPDDVGAFCGQ
LFSRVGKKAQSSSSASKPSASKDSSKKKYRLLDMGEDLPDPASSLGPVNVEAERDRRRQR
DRDRDRDAPSDRDRSRREKEDNRKRDRSRDAESRDRPRTKKLRQRDTNDFDDRWGDEEFG
DEDRYQDEAEFAESPAKRTRLEDGSASPHPASPDEDMDPQTKQELERQRDLRERDEFAKR
LANKDSSKSKKIVEDRTRDSEAAKRRALADDAAARSAVMPDLRERSRQEYLKKREAERLA
LLRSQVAEETAELRENPNLTRREKEEFARNREVLRIAEERLRIDDHRDGYMMPEDYITEK
GKIDRKKKEEALYKRYVDRDESGQERFVTEHEEWELEQAAKAKAQIKKAEFVDEGDYEYV
FDDTQQINFVMESKIEGTEKPMTQEQLRFKQQVDAAEKKAATMEETRKSLPIYQFRDQII
QAVHDHQVLIIVGETGSGKTTQIPQYLHEAGFTKDGLKIGCTQPRRVAAMSVAARVADEM
GTKLGNEVGYAIRFEDNTSDKTILKYMTDGMLLRELLTEPDLGQYAALMIDEAHERTVPT
DIACGLLKDIAKARPDLKLLISSATMDAQKFQKYFDDAPIFNIPGRRYPVDVHYTSQPEA
NYLAAAITTVFQIHVTQGPGDILVFLTGQEEIEAAEQSLQETARKLGSKIPEMIICPIYA
NLPSELQTKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESL
VVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEENTTPEIQRTNLNGVILMLKS
LGIDQLLDFDFMDPPPAETIIRALEQLYALGALNDRGELTKVGRQMAEFPTDPMLAKAIL
AAGQYGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTIKEGGDHLTLLNIWNQW
VDSDFSFVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTISTCGSTNLVPIQKAITAGF
FPNAARLQRGGDSYRTIKNGQSVYLHPSSTLFEVNPRWVIYFELVLTSKEYMRSNMPLQA
EWLVEVAPHYYKKKDLESLGLDRKVPKGTGVAGEKSRT
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaaaccttcgtctccgactctcttatccgtctgaccggcgcgtctgatccg
atcgcggtagactttgtcctcgccgaagcatcctccgccaaatctgcatctgccttacaa
gacaaacttgtttcatttctcgatggcagccccgacgatgtcggcgcattctgtgggcag
cttttctctcgggttgggaagaaggcccagtccagctcgtcggcttccaagccatccgct
agcaaggactcttcgaagaaaaagtatcgtctcttggacatgggagaggacctgcccgat
cctgcatcctcattagggcctgtcaatgtcgaagcagaacgggaccgacgtcggcaacgt
gatcgtgaccgtgaccgtgacgcgccgtccgaccgagatcgaagtcgccgggagaaagag
gataatcggaaacgagaccgcagccgagatgctgaaagtcgagaccgaccgcgaacaaag
aagttacgacaacgggacaccaatgactttgacgatcgatggggcgatgaggaatttggc
gacgaggaccgatatcaggacgaggccgaatttgctgaatcccccgccaaacggaccaga
ctcgaagatgggtcggcctcacctcatcctgcttcgcccgacgaggatatggacccgcag
accaagcaggagctcgaacggcagagagacttgcgcgagcgagacgaattcgcgaagaga
ttggcgaacaaggacagctccaagtccaaaaagattgtggaagatcggacacgcgacagc
gaggcggcaaaaagacgggcgttggccgatgatgcggccgctcgatcggcggttatgcct
gatttgcgcgagcgctcgcgacaggaatatttgaagaagcgtgaggcggaacggctggct
ctgttgcgcagtcaagtggcggaagagacggccgagttgcgcgagaatccgaatctgacg
cgccgagagaaggaagagtttgcgcgcaatcgcgaagtgcttcgcatcgcagaggagcga
ctgcgaattgacgatcaccgagatggctacatgatgccggaagactatattacagagaaa
ggcaagatcgaccgcaaaaagaaggaagaagccttgtacaagcgatatgtggaccgagat
gaatcgggccaggaacgcttcgtgaccgagcatgaagaatgggagttggaacaggccgcc
aaagccaaggcccagatcaagaaggccgaatttgtcgatgagggggactacgaatatgtc
ttcgacgacacacagcagatcaactttgtgatggaatctaaaatcgaaggtactgagaaa
ccgatgacacaggagcagttacggtttaagcagcaggtggacgccgccgagaagaaagca
gcgaccatggaggagacccgaaagagtttgccaatctatcagttccgcgaccagatcatt
caggctgtgcacgaccaccaggtgctcatcattgtcggtgaaactggctcaggaaagacc
acgcagattccgcagtatcttcacgaggcgggatttaccaaggatggcttgaagattgga
tgtacgcagcctcgccgtgtcgctgccatgagtgttgcggcgcgtgtggcggacgaaatg
gggacgaagcttggtaatgaggtgggatacgccattcgtttcgaggacaacaccagcgac
aagaccattttgaagtatatgaccgatggtatgcttctgcgagaactcctcaccgagcct
gaccttggccagtatgcggcgctcatgatcgacgaggcccacgagcgtacggtgcctact
gatattgcgtgtgggcttctcaaagatatcgcaaaagctcgacctgacctgaagctactc
atttcgtcggccacgatggatgcacagaaattccaaaagtactttgacgatgcgccgatc
ttcaacatccccggtcgtcgatatcccgtcgatgtacactacacgtctcagcccgaggct
aattacctcgcagcggccatcaccaccgtgtttcagattcacgtcactcaaggtcccggg
gacattctggtcttcttgacgggtcaggaagagatcgaagccgccgaacagagtctgcaa
gaaacggcgcgaaaactgggcagtaagatccccgagatgatcatatgtcccatttatgcc
aatcttccgtcggaactacaaaccaagatttttgagcccacgccgcccaaggcccgcaag
gttgttctagcgacgaatatcgccgagaccagtctgaccatcgacgggattgtctacgtg
atcgaccctgggtttgtcaaggagaacgtcttcaacccccggaccggcatggaaagtctt
gtggtgactccttgctctcgtgcttcggccaaccagcgagctggtcgtgccggacgtgtc
gggcctggcaaatgcttccgactgtacaccaagtgggcctactacaatgaattagaggag
aacaccacgcccgagattcaacgcaccaacctgaacggggtcattttgatgctgaaatca
ttggggattgaccagcttctcgatttcgatttcatggaccccccgcccgccgagaccatc
atccgcgcgttggagcaactgtatgcgctgggcgcactgaacgatcgcggcgagctcacc
aaggtcggccgacaaatggccgagttccccaccgatcccatgctcgccaaggccattctc
gccgccggccaatacggctgcgtggaggaagtgctttccatcgtatccatgctcggtgag
gccagcgcgctcttcttccgtcccaaggacaagaagatccacgccgacagtgcccgcaac
cggttcaccatcaaagaaggtggtgaccacctcaccctgctcaacatctggaatcaatgg
gtggactctgatttcagtttcgtctgggccaaggaaaacttccttcaacaacgcagtctg
acccgtgcccgcgatgtacgagatcaactcgccaaattgtgcgaccgcgtcgaagtgacc
atcagcacgtgcgggtcgacgaatctcgtcccgatccaaaaggccattacggccggattc
ttcccgaacgccgcccggcttcaacggggtggtgatagctaccgcaccatcaagaacggg
cagtcggtgtatctgcacccgtccagtaccctgtttgaggtcaacccgcgctgggtgatt
tactttgagctcgtgttgacgagcaaggagtacatgcgcagtaatatgccattgcaagcg
gagtggctggtggaggtggcgccacattactataagaagaaggatctggagtctttggga
ttggatcgcaaggttcccaaggggactggagtggcgggtgagaagagtcgcacctga
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