Penicillium oxalicum: POX_g09087
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Entry
POX_g09087 CDS
T09521
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
pou
Penicillium oxalicum
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pou03021
]
POX_g09087
03036 Chromosome and associated proteins [BR:
pou03036
]
POX_g09087
Transcription machinery [BR:
pou03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
POX_g09087
Chromosome and associated proteins [BR:
pou03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
POX_g09087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
Spt6_S1
YqgF
Tex_central_region
SPT6_acidic
HHH_9
SH2
ARM_ECM29_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
74441257
NCBI-ProteinID:
XP_049965996
LinkDB
All DBs
Position
VII:1583850..1588442
Genome browser
AA seq
1424 aa
AA seq
DB search
MSLRDLVDGEAALDDEENDDEVSGDYDEETREGPSTERHYNDSSEEDEDEDDDEDAARAV
REGFIVDEDEEIEERTRRRSEKKRPRAREEEHLDEEDLELIGEVVPGLTRGASSDGAQQQ
SKFKRLKRGRDRETHRGPSQGIDDMFNSDEEEEAAPQYSRPSHRGGRRHDEMDDFIEEDT
FSDEEAQRERDDLEVAAPARATVPGLGATDVAGLDENAVEDLRAAFGDGEDYRFALDIEE
QEDEEKQNEDRHLDLKDIFEPSQLAERGLTEEDNQIRLRDEPERHQIARAPYRHVVLTED
QFREEAVWISQLMLLKKRIEPELREPFQRAVAKMLEFLITDDYEVPFIFQHRKDYMIHAV
KEPLNGADPDDESAQYSIRAEKLLNMTDLWEIFDLDLKFRALVDKRNTIQKSYDNLQSLF
DITDAVVEELLVAASSMEELQDVQDYIHFQYASQLRDLATVNGEANGETQRRKASNKTFF
ERVRNGKAYGLVRAFGLTADAFAQNASKEGRRQYTEDPSERPEELADQHVDTDFSNADQV
LKAAKSMFAEEVVVSPKMRKVIRQAYYMNGVVDCFRTEKGLRRIDEQHPYYEFKYLRNQQ
LSDIARRPEMFLRMLKAEEENLVEVKVRFENFDQFKRRMYADIESDNYSEIADAWNRLRR
DVVDLALGKLERLINRSVKENIRQECENHVAKECREAFSQRLDQAPYKPKGMVLGTVPRV
LTFSVGTGVIGRDPIHWAYIEEDGRVLENGKYLDITVGDPVRGVKDGADVRALLDVIDRR
KPDVIGVSGMTPETRRLYKILTEFVDLKDVRGAPYTDENDEEVSDRLETVLVNDEVARLY
HLSYRAMIDNPGFGPLTHYCVALGRYLQSPLKEYAMLGRDVLSIQFKPGQQLLPQELLNK
HITTALVDMVNLVGVDLNEAVNDPWTANLVPYICGLGPRKAEHLLKIINMNGGVVNNRQE
LLGFNVQYPAMSPQVWSNCASFLYLDFETVDPDADPLDNTRVHPEDYDIARKMAADALEL
DEEDIKAETDENGAGAIVRKLFRDEQQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAE
LQQPYEELRKQFVFLGTDDVFTMLTGETPDSLKTGMVVPIALKRVFDDHIDAKLDCGIDA
LVAETELGLPYHIPVKDVYAPHQTVPAKIIFLNRKSFTCNVSLREDQVSNPIPNTPNHGF
GDWDEAQERKDRESMQQKEQQGGQAMRVIKHPLFKPFNSAQAEEYLGSRSRGDVVIRPSS
RGPDHLAVTWKVAQGVYQHIDVLELDKENEFSVGRVLRVGGKYSYSDLDDLIVNHVKAMA
KKVDEMVLNEKYKEGSKAETDQWLETYTKANPRRSAYAFCINPKYPGYFFLCFKAGEHAR
LQNWPVKVIPQGYELQKNPYPDMQALCNGFKLMFTNLQKQAGRR
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcgcgacctggtcgatggcgaagccgcgctggatgatgaggaaaatgacgat
gaggtctctggggattatgacgaagagactcgggaagggcccagcactgaacgtcactac
aatgactccagtgaggaggatgaggatgaggacgacgatgaagacgctgcgcgcgccgtg
cgcgaggggttcattgtcgatgaagatgaggagatcgaggagcgcacccggcgcaggtca
gaaaagaaacgacctcgtgcccgtgaggaggaacacctggacgaagaagatctggaactg
attggcgaggtggttcctggtctcacaagaggcgcatcatctgatggtgcacagcaacaa
tccaaattcaagcgtctcaagcgaggtcgtgatcgcgaaactcatcgtggcccatcccag
ggaattgacgacatgttcaattctgacgaggaagaggaggcggccccgcaatacagccga
cccagtcaccgtgggggtcgccgacatgacgagatggacgatttcatcgaggaggacacc
ttctccgacgaagaggcacagcgcgagcgtgatgatctcgaagtggcagctcccgcgcgg
gcaaccgtgcccggtctcggagcgacggatgtcgccggtctggatgagaatgcggttgag
gatctgcgcgctgcctttggtgacggtgaggactatcgattcgctttggatatcgaagag
caggaggacgaagagaagcaaaacgaggaccgtcatctggatctcaaggacatcttcgag
ccgtctcagttggccgagaggggtttgacggaggaggataatcagattcgtcttcgggac
gagcctgaacggcaccagatagcccgcgctccataccgccatgtggttctaacggaagat
caattccgtgaggaggcagtctggatctcacaactaatgctgctcaagaagcgtatcgaa
ccggaactacgggaacccttccagcgagctgtggcaaaaatgctcgagtttttaattacc
gacgactatgaggttccatttattttccagcatcgcaaggactatatgatccatgcggtc
aaggagccactgaatggagcggaccctgatgacgagtctgcgcaatacagcattcgtgcc
gagaaactcctgaacatgaccgatttatgggagatctttgacttggatctgaaattccgt
gcgctggtggacaaacgtaacactatccaaaagtcctacgataacctccagagcctcttt
gatatcaccgatgcggtcgtggaagagctgctggttgcggcgtcgtccatggaagagctc
caagacgtccaggactacattcatttccaatatgcctcacaactccgcgacctcgccaca
gtcaatggggaggccaatggcgagacgcagcgacggaaagccagtaacaagactttcttc
gagcgggtgcgcaatggaaaggcctacggtcttgtccgcgcatttggtctgactgccgac
gcgtttgctcagaacgcttccaaggagggccgaagacagtacaccgaagatcccagtgag
cggcccgaggagctcgctgaccaacatgtggacaccgacttctccaacgccgaccaggta
ctgaaggcggccaagtccatgttcgccgaggaggtggttgtgagcccaaagatgcgcaag
gtcattcgtcaggcatactacatgaatggtgtggtcgattgcttccgtacagaaaagggt
cttcgccgaatcgacgaacaacatccgtactacgaattcaagtacttgcgcaaccaacaa
ctcagcgatatcgcccgtcgcccggagatgttcttgcgcatgctcaaggccgaggaggaa
aacttggtcgaggtcaaagtgcgtttcgagaactttgaccagttcaagcgccggatgtac
gccgacattgagtccgacaactattcagagatcgccgatgcttggaaccgtcttcgccgt
gacgtggtggatctggcgcttggaaagttggaacgactgatcaaccgcagcgtcaaggag
aatatccgacaggagtgcgagaaccacgttgccaaagagtgtcgcgaggcgttttcacag
cgactcgaccaagctccttacaagcccaagggaatggtgctgggcaccgtcccaagagtt
ctcacgttttctgtcggcaccggcgtcattggccgggaccccatccactgggcctacatt
gaagaggacggccgtgtgttggaaaatggcaagtacttggatatcacagtgggagatccg
gttcgtggcgtcaaagacggtgcggatgtccgtgctcttctggacgtgattgatcgccga
aagcccgacgtgattggagtgtccggcatgacaccggagacacgtcgcctctacaagatc
ctaaccgagttcgttgacctcaaggatgtgcgtggtgccccctacacggatgaaaacgat
gaagaggtcagtgaccgtctcgagacggtcttggtcaatgatgaagtcgcgcgcctgtat
cacctcagctaccgggccatgattgacaatccaggcttcggacccctgacccactactgc
gtggcgctcggtcgctacctgcagagccctttgaaggagtatgccatgttgggtcgtgat
gttctctccattcagttcaagcccggtcagcagcttttgccccaagagttgcttaacaag
catatcaccacggcattggtggacatggtcaatcttgtcggagtagacctgaacgaggct
gtcaacgacccttggaccgcgaacttggttccctacatctgtggtctgggtccgcgaaag
gccgagcatcttctcaagatcatcaacatgaacgggggtgtggtgaacaaccgtcaggag
ctgttgggtttcaacgtgcagtaccctgccatgtcccctcaagtgtggagcaactgcgcc
agtttcctctaccttgatttcgagacagtggatcccgatgcggaccctctggataacacg
cgtgtgcaccccgaagactacgatattgcccgcaaaatggcggccgatgccctggagctg
gacgaggaggatatcaaggccgagaccgatgagaatggcgctggagccattgtacgcaag
ctgttccgggatgagcaacaagaccgtgtcaacgatttgatcttggaggagtatgcggag
cagctggagaagaacctcaatcagcgcaagcgagctaccctggagaccatccgggccgaa
ctgcaacagccatatgaagagctgcgcaagcagtttgttttcctgggcacggatgatgtc
ttcacgatgctgactggtgagacccccgactcgctcaagacgggtatggtggtgcccatc
gcgctcaagcgggtgtttgacgatcacatcgatgcgaagttggactgcgggatcgatgcg
ctggtcgcagagacggaactcggtctgccttaccacatccccgtcaaagacgtctacgcc
ccacatcagacggtaccggccaagatcatcttcctcaaccgcaagagcttcacctgtaat
gtctcactccgtgaggatcaggtcagcaacccgattcccaacacccccaatcatggcttt
ggggactgggacgaggcgcaagagcgcaaggatcgggagtcgatgcaacaaaaggagcag
cagggtggtcaggcaatgcgtgtgatcaagcatcccctcttcaaacccttcaattcggcc
caggccgaagagtatctgggctctcgaagccgcggtgacgtggtcattcggccctcttcg
cgaggacccgatcacttggccgtgacgtggaaggtggcccaaggtgtctaccagcatatc
gatgtactggagctcgacaaggagaacgaattctccgtgggtcgcgtgctccgtgtgggt
ggcaagtacagctacagcgatctggacgatctcattgtcaaccacgtcaaggcgatggcc
aagaaggtggacgagatggttctgaatgaaaagtacaaggagggcagcaaagctgaaacc
gatcaatggttggagacctacaccaaggccaaccctcgtcgctcggcctatgccttctgc
atcaaccccaaataccccgggtacttcttcctctgtttcaaggccggtgaacatgcccgt
cttcagaactggccagtcaaggtgattcctcagggatacgagttgcagaagaacccgtac
cccgacatgcaggccttgtgcaatggcttcaaattgatgttcaccaatctgcaaaaacaa
gccggtcggaggtaa
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integrated database retrieval system
