Entry |
|
Name |
(RefSeq) hypothetical protein
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KO |
K03138 | transcription initiation factor TFIIF subunit alpha |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pou00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
POX_g09185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pou03021]
POX_g09185
Transcription machinery [BR:pou03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
POX_g09185
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
VII:1997560..1999922
|
AA seq |
725 aa
MSTPGNASNGPTPTGPNGGPPPPMRLRRPKNAGDPLVRPKRRPARPLGVAPGAGATVASK
TLPSHPSSVHGPAPQPKLPATRPPAAPDARSVNGFSGPLLSEKYVDYPLVTTRKALREGL
KHHIARFAAKKAIDPRDESQFTRPVRLHRRDPRARTHEHHGQKMVGPDGQQLDEAEREAL
EARKAAREKERAENLAQIAPSVGSTAKRPNAPKQKTQQVFKSDMTKEEIARARIKYEEAL
PWHLEDFDNRNVWVGNYEAALSETYAVIVFENNKMRMIPAEKWYKFTAKQQFKALTIEEA
EKFMSKRIKDPRWFMEKQKEIQAKKELESYAKIHKVYAGKSGGMSGREGLEASEMDFEED
RFADDEEHADLFNDEQDEDTKAAERRIKEDQLKANVFDLKNEKDYEDEEEREKREREARR
TFGKKVRKALKKRERNFDYSSGSDANPYTDEESSDDSEVERQKEEEKAQKEKEKDSAVST
KGSNTPSGRPKHTDALKKPTGSRKRLGSPGSDASGTDTSRKKAKNKHQTSAPTSRPMSPS
AVQPGKKRMRDDTPGLTGSGSEIDIDARSGGELPLPVVAPLKDPEPPVPLPVTNSLAAEL
QAPMAFEASLFSPLLSPSSVTRLPHPFPEEFCTFWKGYTNALPVEVSGAGRSTPVPSNQP
FPTPAEIHAAIPATGITSSDLLRIFRPRIGESKENHRRFIAIVKDVGLYGKEDRLLRPGT
WKPTQ |
NT seq |
2178 nt +upstreamnt +downstreamnt
atgtcgactccaggtaacgcctccaacggcccgaccccaaccggacccaacggcggtcct
cctcctccgatgaggcttcgccgccccaaaaacgccggcgatcctctggtccgacctaag
cgacgaccggcgcgacctcttggagttgcccccggtgccggtgcgactgtagcctcaaag
accctgccctcgcacccttcctctgttcacggccctgcgcctcagccaaagcttccagct
actcgaccgcctgccgccccggatgcacgctccgtcaatggattcagtggaccattgctc
tccgagaaatacgttgattaccctctcgtcaccactcggaaagctttgcgcgaaggactc
aaacatcacattgcccgttttgccgccaagaaagccattgatccacgcgatgaatcccag
tttacacgacccgtccgacttcatcgccgcgacccacgagctcgaactcacgagcatcac
ggccagaagatggtcggccctgatggccagcagttggatgaggcggagcgagaagctctc
gaggcccgcaaagccgcgcgggagaaagaacgagcggagaatttggcgcagatcgcgcca
tcagtgggatcaacggcaaagagaccaaatgcacccaagcagaagacacagcaggtgttc
aagtcggacatgaccaaggaggaaatcgcccgagctcggatcaagtacgaagaagctctg
ccgtggcacctggaggactttgataatcgcaatgtctgggtgggcaactacgaggctgcc
ttgtcggagacatatgccgtgatcgtgtttgagaataacaaaatgcgaatgattcctgcc
gagaagtggtacaaattcactgccaagcagcagttcaaggcgttgacgatcgaagaagcc
gagaaattcatgtcgaagcgcatcaaggatccgagatggttcatggaaaaacaaaaggaa
attcaagcgaagaaagaactggagagctatgccaaaatccacaaggtgtatgccggaaag
tcgggcgggatgtcgggcagggaaggcctggaggctagcgaaatggactttgaagaggac
cgattcgccgatgacgaggagcatgccgatctgttcaacgacgagcaggatgaagataca
aaagccgccgagcggcgtatcaaagaagaccaattgaaggccaacgtctttgacctgaag
aacgaaaaggattatgaagatgaagaagaacgagagaaacgggagcgagaagcgcgccgc
acatttggcaaaaaagttcgcaaagctctcaagaagcgagagcgaaactttgactacagc
agtggctctgacgcgaatccatacacggacgaagagagctctgatgatagcgaggtggag
cgacaaaaggaagaagagaaagcccaaaaggaaaaggaaaaggattcggccgtgtccacc
aagggcagcaacacaccttctggccgacccaagcatactgatgccttgaaaaagcccacc
gggtctcgaaagcgactgggatcccctggctcagatgcaagcggtactgacacctctcga
aagaaggcgaagaacaagcatcagacctccgcacccacttcgcgtccaatgtccccctct
gcagtacagcctggtaagaaacgcatgcgagatgatactcccggcctcactggctccggc
agcgagatcgatatcgacgctcgatctggaggcgagctgccgcttcccgtagtggcaccc
ctcaaggatcccgagccaccagtcccgttgccggtcaccaattccctggcagccgagctg
caagccccgatggcattcgaggcaagtctcttctctcctctcctctctccctcttcggtg
acccgtcttccgcacccattcccagaagagttttgcactttctggaagggctatactaat
gctctccccgtggaagtctcaggcgccggccgctccactcctgtcccatcaaaccagccc
ttccctaccccggccgaaatccacgctgcgattccagccactggtatcaccagttccgac
cttttgcgaatcttccgccctcgtattggtgagtccaaggagaatcatcgccgtttcatt
gccatcgtgaaggatgttggcttgtacggtaaagaggaccgtctcctgcgccctggcact
tggaaacccactcagtaa |