Paralichthys olivaceus (Japanese flounder): 109623493
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Entry
109623493 CDS
T06037
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109623493
Transcription factors [BR:
pov03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109623493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Gp13-like
AAA_23
Motif
Other DBs
NCBI-GeneID:
109623493
NCBI-ProteinID:
XP_019933551
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MMSSMRTTPPFHPPSEEEEVAGQEAAWAKHERESPKESASPSSHDQSHPDELQPIREKTT
DIEWENVGPAVMDTESNKGCSVYSYQTNSTSPHKPEECSRDRGEPMIGLAFGTPERRKGS
LADVVDTLKQKKLVELTKTEQDEPSCMERLLSKDWKERVDRLNASELLEEVKGTPESLEE
KEHQLSTMIGQLINLREQLLAAHDEQKKMAASQLEKQRQQMELARQQQEQIARQQQQLLQ
QQQKINILQQQIQVQGHMPPLMIPVFPHDQRSLAAAAAAQQGFLFPPGMSYKPAGDNYPM
QFIPSTMAAAAASGLSPLQLQQLYAAQLASMQISPGAKMAPLPQAPNSSGPLSPSALKSE
RRASSPITQIKEEGSTQPLNLSARPKTAEALRSSTSPTQGLFSGNKTSPTGMGKGRIPSP
TPIMGRNSLDILSSLNPTALFGDQDAVMKAIQEARNMREQIQREQLHQQQQHSGHQSLEA
KLSALSSMTLNNGNKERLHYETLSQHLGKLGEDAGKMVHRVIDLTRPEDLDGNNVTEARV
FREARGRNTTEPHIKRPMNAFMVWAKDERRKILQTFPDMHNSNISKILGSRWKSMTNQEK
QPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFVG
PQPPIPLGNSPGGVGVYPGAITMATTATPSPHLTSDCSSNSASPEPAIPVIQSTYGVKSE
PGGGSNGGRVRALDLPSDPANGDDDMDMYEDFDDEPKSDYSSDHETREAISAN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttccatgcgaacaacgcctccctttcacccaccgtctgaggaagaggaagtg
gccggtcaggaagcggcctgggccaaacacgagcgagagagcccgaaggagagtgcatcg
ccttcttcgcatgaccaatcccaccctgacgagctgcagccaatcagagaaaagacgacg
gatattgagtgggagaacgttgggcctgctgtgatggacactgaaagcaataaaggctgc
tcggtctactcctaccagactaactctacctctccacacaagccagaggagtgttccagg
gatcgcggggagcccatgatcggcctcgcgttcgggacacctgagcgccgcaaaggcagc
cttgcagacgtggtggacacactgaaacagaagaagctagttgagctgacaaagacagag
caagacgaaccatcgtgcatggagaggctcctctcaaaggactggaaggagcgcgttgac
cgcctgaacgccagtgaactgctggaggaggtcaaaggtacgccagagtctcttgaggag
aaggagcaccaactttccaccatgattggtcagctgatcaacctgagagagcagctcctc
gccgcccatgatgagcagaaaaagatggcggcctcgcagctggagaagcagaggcaacag
atggagctggcccggcagcagcaggagcagattgccagacaacagcagcagctcctgcag
cagcagcagaagatcaacattctccagcaacagatccaggtccagggtcacatgcctccg
ctgatgatcccagtgtttcctcatgaccagcggtccttggctgcagccgctgctgcacag
caaggcttcctcttcccaccgggcatgtcctacaagccagcaggtgataattaccccatg
cagttcattccatcgacaatggcagctgcagcagcatctggactgagcccgttacaacta
cagcagctgtatgcagcccagctggcaagcatgcagatctccccaggagccaagatggct
cccctcccgcaagctcccaactcctccggtcccctctccccctctgcactgaagagtgag
aggcgagcatccagtcctatcactcagattaaggaggaaggatccacgcagccattgaac
ctctcagccagacctaagacagctgaggctctccgctcctcgacgtccccaacacaaggt
ctgttctctggaaacaagaccagccctacaggcatgggcaagggccgcatccccagtccc
acccccatcatgggcaggaactctcttgacatcctgtccagcctcaaccccacagcgctg
tttggggaccaggacgcagtgatgaaggccatccaagaggcgaggaacatgagggagcag
atccagcgggagcagctccaccagcagcagcagcattcaggacaccagagtctggaggcc
aaactgtctgccctcagcagcatgaccctcaacaacggcaacaaggagcggctgcactat
gagacgctgagccagcacctggggaagctcggagaggatgctgggaagatggtccaccgg
gtcatcgacctgacgagaccagaagatctggatgggaataatgtcacggaggcccgagta
ttcagggaggcgcgaggcaggaacaccaccgagccccacatcaagcggcccatgaacgcc
ttcatggtttgggccaaagacgagaggaggaagatcctgcagactttccccgacatgcac
aactctaacatcagcaagatcctcggctctcgctggaaatccatgaccaaccaggagaaa
cagccgtactatgaggagcaggcccgtctgagcaagatccacttggagaaatatcccaac
tacaaatacaagccgcggcccaagagaacctgcatcatcgacggcaagaagctgcgcatc
ggagagtacaagcagatgatgaggtcacgacgtcaggagatgaggcagttctttgtgggg
cctcagccaccaattcctcttggcaacagcccgggtggggtaggagtttacccaggtgcc
ataaccatggcgacgacagccacgccatccccacacctgacctcagactgctccagcaac
tcagccagccctgaacccgccatccccgtcattcagagcacatacggggtaaagtccgag
ccaggtggaggcagcaatggcggccgagtcagagccttggatctgcccagcgatcctgcc
aacggagacgacgacatggacatgtacgaagactttgatgatgagccaaagtcagactat
agcagtgaccatgagacgcgggaggccatcagtgccaactga
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