Paralichthys olivaceus (Japanese flounder): 109624094
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Entry
109624094 CDS
T06037
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109624094 (tdrd12)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109624094 (tdrd12)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109624094 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109624094
NCBI-ProteinID:
XP_019934149
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MFKISILKVENPSCLWGRVFRSLGTNTETTEEYDSMLSQMNLFYHDVTKDLFKLKPTSIE
EGQVCVVYWSVRRLWCRAVVESIITDSVSCKARCLLVDHGERLVVASDQIRVAAQNFLQL
PFWVRRFHLAGIKPTTLRVCVYQENAELIPTTHWDSSATLYLHNLLHASTWTEAVMLESD
SDSTSIELYLTVGNIKICVNDDLVAKKFAYYTRESAETSGLDEVDRFPIMLSSSILTQTA
SITSRKPTKKIKPPAVTSECLAAGRACDWLTAPSPPQSQQHELSTSDGDCRPNITEEQLS
PGSQSGSSSQPAAVESDSPDDTDSSLAAALTRNLSLFKFMKFLNPGSSHQQEAHSVGELE
ELNNCQPKELTTASTTCTGQEELTPLRNSEPVTPDEDVVHMSCKSISVESGPAETEKTRR
SEAARACSRLLEWLNPEPLNPDPDAGDDTVVPSEPRTSGILVHSALPVQPCTNLDDAPIT
DALRWVLRQKQYSTLSPADCYSWPAVSRGCNTVIVSPNADQPLSYLAPLLTHILLNSIFS
SLTSSMGPIAVLLCPGWEKVQQVYDLLENFKITHVLHPVVMLMGVGKDEAKTIRIPKNCL
LLVTTPFSFVRLLSCHCFMFLRLYHLLLDEADQLFTLAPDEMEIILQHFQKVTSSEEKNS
SPQQLIAVAKRWTSHMEGLLTNHMPYPCIVMTAPEEAALYGNVQQVILMTLESSKISELL
GTLDFSPDVGQKTLIIANCAQEVEDVFKAVSSKSAFCLKAHERVTHQFDFVIQQWRKNIG
PGTHVILVTTNECLKCFGIRDASCVIHYGFPTSPKLFGSRLFSMSDNFRNLSERVSTQDQ
TGSCPHVTRSVLLISERNARHVVGVLRYLGRTNALLPPELLSFSQGIYMVREDLKTNRPL
CSYLKSLGVTRAISQKIRGLQHRARAVLSLGNTVFVDPMVRVSQVPGMKTVINEYNVQSE
ILNTGMGISNPDHLKLLRALCQEGEDSSSKEAGHTNGVEDNSVSLEVRIKAEEEVLAEVF
RAAEARKLSDPPQLEPLSPVSPMSHSPVPAPPASQLHLSDIQAADEQRYNHTPDLKSAKQ
MMSFHPQILWYQTSDSMIVTVKLMNPESQHCDFYPDRVIYSGRVNSKSYRADLELQGNIA
VDRCCWEMKYNEPVLKLVKQQQGHWEKLLRNKNIFVSYDMQHFEDNEDKAPNGPWFVGNT
GEDNWYVNSESSSESD
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagatatctattctgaaggttgagaacccctcctgcctctggggtcgggttttt
cggagtctgggcactaacacagagacgacagaggagtacgacagtatgttgtcgcagatg
aacctcttctaccacgacgttactaaggacctgttcaaactgaagcccacgtcaatagag
gaggggcaggtgtgtgtggtgtactggtcagtgaggaggttgtggtgtcgggctgtggtg
gaatcaattattacggactctgtatcgtgtaaagctcgctgcctgctggtcgaccacggt
gaacgtctcgtcgttgcttcagaccagattcgagtcgctgcacagaacttcctccagctg
cctttttgggtgaggaggttccacctggcaggaatcaaaccaacaaccctgcgagtgtgt
gtttaccaggagaatgcagagcttatcccgaccactcattgggacagctcagctacgctc
tacctacacaacctgctacatgcttcaacttggacagaggctgtgatgcttgaatctgac
tcagactccacctccatcgagctctacctaactgttggaaacatcaagatctgtgtgaac
gatgaccttgtggccaagaagtttgcctattataccagagagtctgcagaaaccagtggg
ttggacgaggtggatcgatttcccatcatgttgtcctccagcatcttgacccagacagcc
tccataacgtcacgcaagccgacaaaaaaaataaaaccacctgctgtgacatcagaatgt
ctggctgcaggcagagcatgtgattggctgacagcaccctctccaccacagagccaacag
catgagctgagcacctctgatggagactgcaggccaaacatcacagaagagcaactgtct
ccaggcagccaatcagggagcagctctcagcctgctgctgtggagagtgactcaccagac
gacaccgactcctctctggctgcagctctgactagaaacctcagtttgttcaagttcatg
aagtttctgaatcctggcagcagccatcagcaggaggctcacagtgttggtgagcttgaa
gagctgaacaactgtcaacctaaagagctgactacagcctccaccacctgcacaggacag
gaagaattaacccctttacgcaacagtgagcctgtaacaccagacgaggatgtggtccat
atgagctgcaaaagtatttcagtagagtcaggaccagcagagacagagaagacgaggagg
agtgaagctgccagggcttgttcacggcttttggagtggttgaaccctgaacctctgaac
cctgatccagacgctggagatgacactgttgttcccagtgagcccaggacaagtgggatt
ctggtgcactctgcgctcccagttcagccctgcaccaatttggatgatgcccccatcact
gatgctctccgctgggtgcttcggcagaagcagtacagcactctgtctccagctgactgt
tacagctggccagctgtgtctcgaggatgcaacaccgtcattgtgtcccctaatgctgac
cagccgctcagctacctagccccactcctcacccatatcctgctcaactccatcttcagt
tccttaacctccagcatggggcccatagcagtgctgctgtgtccaggctgggagaaagtt
cagcaggtgtatgacctgctggagaatttcaagatcactcatgtgctccaccctgtcgtc
atgctgatgggtgttgggaaggatgaggccaagactatcaggatcccgaagaactgtctg
ctgttagtgaccacccccttcagtttcgtccgtctgctgtcttgtcactgcttcatgttc
ttgcgtctttatcacctgctgttggacgaggccgaccagctcttcactcttgctccagat
gagatggagatcattttgcagcatttccagaaggtgacttccagcgaggagaagaactca
agtcctcagcagcttattgccgtggcgaagagatggaccagtcacatggagggattgtta
accaatcacatgccctacccctgcatcgttatgaccgcccctgaggaagctgctctctat
ggtaacgttcagcaggtcattctcatgactctagagagcagtaagatctcagaactgttg
gggacgttggatttcagcccagatgttggccagaagactctgatcatagccaactgtgct
caggaagttgaagatgtgttcaaggccgtaagcagcaaatctgctttctgcctcaaggct
cacgagagagtaacacaccagtttgactttgtcatccagcagtggaggaaaaacatcgga
cctggaactcatgttattctggtgaccaccaacgagtgtctgaagtgttttggaatcaga
gatgcatcttgcgtcatccactacggtttccccacttctcccaagctgtttggcagtcga
ctcttcagcatgtctgacaacttcagaaacctctcagaacgggtttctacccaggatcaa
acagggagctgccctcatgtcaccaggtcagtgctgctgatctcagagaggaacgctcgt
catgttgtgggggttctgcgttacctgggacggaccaacgccttgctgccccctgagcta
ctgtctttcagccagggcatctatatggtcagggaggacctgaagaccaacaggcctctc
tgcagctacctgaagagccttggagtcaccagagccatcagtcagaagatccgaggtctg
cagcatcgcgccagagcagttctcagtctgggaaacactgtctttgttgatcccatggtc
cgggtgagccaggtgccaggtatgaaaactgtcatcaacgaatataatgtccagtctgag
attctgaatactggaatgggaataagcaacccagatcatcttaaactgctgagggcactg
tgccaggagggtgaagacagcagcagcaaagaggcaggccacacaaatggggtggaggac
aactcagtgtctctggaggtcaggatcaaagctgaggaagaagttctggctgaagtcttc
agagcagccgaggccaggaagctctctgaccctcctcaactcgagccattaagcccagtg
tctccgatgagccacagcccagtcccagcaccaccagcttctcaactccacctctcagat
attcaggctgcagatgagcagagatacaatcacactcctgatctaaagtcagctaaacag
atgatgagtttccaccctcagatcctttggtaccagacgtccgactccatgattgtaaca
gtgaagctgatgaacccagagagtcagcactgtgacttctaccctgacagggtcatctac
agtggcagagtgaacagtaagtcctacagagctgacctggagcttcagggcaacatcgct
gtggaccgctgctgctgggaaatgaagtacaatgagccagtcctcaaactggtcaaacaa
cagcaggggcactgggagaaactactcaggaacaagaatatttttgtgagttatgatatg
cagcattttgaagacaatgaagacaaagcaccaaacggtccgtggtttgtggggaacaca
ggagaggataactggtatgtgaactcagagagtagcagtgagagtgactga
DBGET
integrated database retrieval system
