Paralichthys olivaceus (Japanese flounder): 109624139
Help
Entry
109624139 CDS
T06037
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109624139 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109624139 (myo5c)
04131 Membrane trafficking [BR:
pov04131
]
109624139 (myo5c)
03029 Mitochondrial biogenesis [BR:
pov03029
]
109624139 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pov04812
]
109624139 (myo5c)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109624139 (myo5c)
mRNA cycle factors
P-body specific factors
109624139 (myo5c)
Membrane trafficking [BR:
pov04131
]
Others
Actin-binding proteins
Myosins
109624139 (myo5c)
Mitochondrial biogenesis [BR:
pov03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109624139 (myo5c)
Cytoskeleton proteins [BR:
pov04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109624139 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
Csm1_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
109624139
NCBI-ProteinID:
XP_019934195
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MALLELYTEFNRVWIPDAEHVWKSAEIVRDFYSGDKVLELLLEDGTKHHHPVDPSTPCLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AIVSKSGSKTRVEDKVLASNPVTEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAQLPEFKSLRLLSADNFRYTCMGGDITIEGVD
DKKDMEETRRTFSLLGLKEDFQSDVFKVLAAILHLGNLEIRDSGKDKSSVSLSDPHLAVF
CELLGVSVEGLVRWLCHRRIVLVAETVVKPVPKKRAVNARDALAKHIYAHLFDCIINRIN
TALQVPGKPHAFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQLVIDLIEAKMGILDLLDEECLFPQGTDQTWLMKLHNYLDNNPLFEKP
RLSKEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRASKFPFLAHFFQEEEQNTAN
SKGIKVRPARPGLKPANKQLRASVGDKFSSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRVSAQSYPSRWTYIEFYSRYSILMSHQEADLRDKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGASVTIQKHVRGWSQRRKYLRMR
EAAIILQQYIRGKKTIRKMVSAATLKQGWASMVIQRHWRGYRTRQIYQLVRLASVTIQAF
TRGWMARKRYKKMVEENKALILQKYARAWLARRRFQTMRRLVLNVQLSFRVQQLRKKIEE
QNKENRGLMERLTCLANTHSQTVDRLQGVEAQLQKSTSQKASVEAREKKVKENATQTIAQ
LQKEINVLTLEKQNLDKKFEASTTEAKENFDVIKRNLLDEKETEARLRKIAENNMEIQRQ
DHEKEVEALKEEIKRLKEERVTLHRKVEEEGQVNSDLQEQVLQLTKHVKTIPELRRDLNN
LQNQRNNVDRKMKQQSEQARAKMNEITRQLLGGVVEEEVLLGLTPNDSEKIYEVEDLLAA
FEGLQKATRILETHQREQKESYETQLEGLQLKVDHLQNENSKLQNLFQEKSNINENIRQE
VSRLSSENSVLPELKLQVSELQRHKQELEVHAKELNRELEEKTEEITNTLQTKIKEESLQ
RRHFEEKAEALEELKRQLQGRVEDLEEENDHLRRQQLMESEAKSKLREETSQLTAENMDF
EEQLDQRDRLIKKLQNQINSFESSQKAKQTSAPAMPKDYLGMLEYKREDEPRLIQNIILD
LKPKGVVVNMIPGLPAYILFMCVRFADYLNDETKLKSLMNATICAIKKIIMDHPKDFELL
SFWLSNTCQLLNCLKQYSGEEEFMKQNTPHQKKNCLQNFDLSEHRQILSDLAIHIYHQFI
TVMEKSITPGIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETYSISSIIQQLSVFHS
TMNQHGMEQGLIKQAVKQLFYQVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLSQAAWLLQVNKSTDDDAKEITEKCTELNPVQIVKILNSYTPIDDFE
KRVSSSFVRKVQSLVQDRAGSTQLMLDTDYRFQVTFPFCPSLQALELLQVPNSLRLGFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctctgttggaactgtacactgagttcaacagagtgtggattccagatgcagaacat
gtgtggaaatcagcagagatagtgagagatttttattctggagataaagttctggagttg
cttcttgaagatggaacaaagcaccaccaccctgtcgacccgtccactccatgcctccct
cctctcagaaacccagacatcttggtgggggagaatgacctcaccgctctcagttacctc
cacgaacctgcagttctgcacaacctcaaagtgcgatttgtggaatccagaatcatctac
acctactgcggtattatactggtggcagtaaatccctacaaacagctccctatctacgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gctgtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctattatc
gtcagcggtgagtctggagctggtaaaactgtgtctgctcgttatgctatgagatatttt
gccattgtcagcaaatctggcagcaaaactcgagttgaagacaaagtccttgcgtctaat
ccagtaacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgattt
gggaaatacacggagatcagctttgacaggaggtaccgcatcattggagcaaacatgagg
acctacctcctggagaaatccagagttgtttttcaggccgacaacgagcggaattatcac
atattttaccagatgtgctcctgtgctcagctgccagagttcaagagcctgagactgttg
agtgcagataacttccgttacacgtgcatgggtggtgacatcactattgaaggtgtagat
gacaagaaagacatggaggagactcgacggaccttctccctgctgggtttaaaggaagac
tttcagtcagacgtgttcaaagtgttggcagccattctgcatttggggaacctggagatc
agggactcaggaaaggacaaatcgtcagttagtctcagtgatccacacctggcagtgttc
tgtgagttactgggtgtaagtgtggaggggttggtgcgctggctgtgccatcggaggatc
gttctggtggctgagacggtggtgaaaccagtgcccaagaagcgggcagtgaatgccaga
gacgccctcgccaagcacatctacgcacatctttttgactgtataattaacagaataaat
acagcactgcaggtccctggaaaaccacatgcttttataggcgttctggacatttatggc
tttgaaacatttgacgtcaacagctttgaacagttttgcatcaactatgcaaatgaaaag
cttcagcagcagtttaacttgcacgtgttcaagctggagcaggaggagtacatgaaagag
gacatcccatggacgctgattgatttctatgacaaccagcttgtcattgacctgatcgaa
gcaaagatggggatccttgacttgcttgatgaagaatgtttgtttcctcagggcactgac
caaacctggctgatgaaattgcacaactacctggacaacaatcctctgtttgagaagccc
aggttatcaaaagaggcttttgtaatacaacactttgcagacaaggtggagtatcagtgc
agaggttttcttgaaaagaacagagacactctctatgaagaactagtggatataatgaga
gccagtaagtttccttttctggcccattttttccaagaggaggagcaaaacactgccaac
agtaaaggcatcaaagtcaggcctgccaggcctggactgaaaccagccaataaacagctg
agagcgtctgtgggagataagttttccagctccctgtccttactaatggagacactgaac
gctaccaccccacactatgtgcgatgcatcaagccaaacgatgaaaaactcccatttgaa
tacgactccaggagggtcgtgcagcagctgcgagcctgtggcgtccttgaaactatccgt
gtcagtgcacagagctatccgtccagatggacatacattgagttttacagccgatacagt
atcctaatgtcacaccaggaggcggacctcagggacaagaaacagacctgcaaaaatgtg
ctgcagaggttgattcaggaccccaaccagtacaagtttggtcgcacaaagatcttcttc
cgagccggtcaggtggcttatctagagaagctgcgtctggaccgacttcgaggagccagc
gttaccatccagaaacacgtccgtgggtggagccagaggaggaagtacctgcgcatgaga
gaggcggccatcatcctccaacagtacatccgtggaaagaagacgattcgtaaaatggtg
agtgctgcaactctgaagcagggatgggcttcaatggtgatccagagacactggagagga
taccgcacacgacagatctaccagttagtccgtctggcctctgtcaccatccaggccttc
acacgaggctggatggcccggaaacggtacaagaagatggtagaagagaacaaagccctg
attctccagaagtacgccagagcgtggctggctcgacggcgattccaaaccatgcgcagg
ctggtgctgaatgttcagctttcattcagagtgcagcagctcagaaagaagattgaagag
cagaataaagagaaccgtgggttgatggagagactgacctgcttggccaacactcactct
cagactgtggacagacttcagggtgtggaggcgcagctgcaaaaatcaaccagccagaag
gcgtctgtggaggcaagagagaagaaagtgaaagaaaatgctactcagacaattgcacaa
cttcaaaaggagataaatgttctaacccttgaaaaacagaacttggacaaaaagtttgaa
gcttccaccacagaggccaaagagaactttgatgtgataaaaagaaatctgcttgacgaa
aaagaaactgaagcaaggctaagaaagattgcagagaacaacatggagatccagagacag
gaccatgagaaggaggtggaagctctgaaagaggagatcaagagactgaaggaggagaga
gtcactctgcacagaaaggtcgaggaggaaggccaggtgaactccgacctgcaggaacag
gtcctccagctcaccaagcacgtcaagaccattcctgagctgcgcagagatctgaacaac
ctgcagaaccagagaaataacgtggaccggaagatgaagcagcagtcggaacaagcaaga
gccaaaatgaacgagattacaagacaacttcttggtggtgttgttgaagaagaggttctt
ttggggctgactccaaatgactctgagaagatttatgaggttgaagatttgctggcagct
tttgaaggactgcagaaagctaccagaatactggaaacccaccagagagagcagaaggag
agctatgagacccagcttgagggcctgcagttgaaagtggaccaccttcaaaatgagaac
agcaagcttcaaaacctgttccaggagaaaagcaacatcaatgagaacattcgccaagaa
gtgtccagactcagcagcgagaactcggttctaccagagctgaagctgcaggtgtcagag
ctgcagagacataaacaggaactggaggtccatgcaaaggagctgaacagagagttagaa
gaaaaaactgaggagatcaccaacactcttcaaacaaaaattaaagaagagagtttacag
cgcagacactttgaggagaaagctgaggcgctggaggagttgaagaggcagcttcaaggc
cgagtggaggatctggaagaggagaacgatcacttgaggagacagcagctgatggagagt
gaggccaagagtaaactgagagaggagacttcacagttaactgctgagaacatggacttt
gaagagcagctcgaccagagagacagattaataaagaaactccagaatcaaatcaacagc
tttgagtcatcacagaaagccaagcaaacttctgctccggcaatgcctaaagattacctc
ggcatgttggaatacaagagggaggacgaacccaggctcatccagaacatcatcctggac
ctgaagcccaagggtgtggtggtcaacatgatcccgggtctgccagcctacatcctcttc
atgtgcgtccgcttcgctgactacctgaatgacgaaaccaaactcaagtctcttatgaat
gcaaccatctgtgctatcaaaaagatcatcatggatcaccctaaagactttgagttgctc
tccttctggctctctaacacatgtcagctgctcaactgtctgaagcagtacagcggggag
gaggagttcatgaaacaaaatactccccaccagaagaagaactgtctgcagaattttgat
ttgtcagagcacagacagattctcagcgacctggccatccacatctaccatcagtttatc
acggttatggaaaagagcatcactcctgggattgtacctggtatgttggagcacgagagt
ttacaagggatttctagtatgaagccgacgggcttcagaaaacgttccaacagcatctac
gaggactcagagacctacagcatctcctccatcattcagcagctcagtgtcttccattcc
accatgaaccagcatggcatggagcagggcctcatcaaacaagccgtcaaacaactgttc
taccaagtgggggccaccacactcaacaacatcatgctccgcaaagacatgtgctcctgc
aggaagggaatgcaaatcaggtgtaacatcagttacctggaggagtggctgaaggagaag
gaacttcagagctctaatgctatagatactctgaggccgttgtctcaagccgcctggctg
ctgcaagtcaacaagtcaacggacgatgacgccaaggagatcactgaaaaatgcactgaa
ctcaaccctgttcagattgtcaagattttgaattcatacacacctatagatgattttgag
aaaagagtgtcatcatcctttgtccgcaaagttcagtcattggtgcaagatcgtgctggc
tccacacagctgatgctggacacggattatcgtttccaggtcacgtttcctttctgccca
tccctgcaggctctggagctcctgcaggtcccaaacagtctccgtctgggctttctgacc
cggatctga
DBGET
integrated database retrieval system
