Paralichthys olivaceus (Japanese flounder): 109624175
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Entry
109624175 CDS
T06037
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03420
Nucleotide excision repair
pov04115
p53 signaling pathway
pov04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109624175 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
109624175 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
109624175 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109624175 (ddb2)
03400 DNA repair and recombination proteins [BR:
pov03400
]
109624175 (ddb2)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109624175 (ddb2)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109624175 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
109624175
NCBI-ProteinID:
XP_019934248
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MKSRAADSEGSKSKGKGKKRPAEKSAPSLSRTRRDKKDGETSKAGPPPLKFAGVQRRGVH
GSILHYIYKNTLGQSLHSQMRQCLQEPFIRSLSSYHFHSATSPFDRRITCLEWNPVHHTT
LAVGSKGGDIHLWDYEVPTKKSFIQGNGAGDFIGGMKFCPTDSSRVYVASGEGNLSMHSF
EGLTPTTLSRTQDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNMGQLLLLGLDGQKIFSNK
LHKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDQKSFLHDLPHEKAVNSACFNPL
DCSKLLTTDQYDEIRVYSSCDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIVAGRYPD
DRVCSGDQRTIDIYDSNTAELVYQLYDPTVSGIKSINKFNLMGDVIGSGMGLTVLVWDRN
ESLIRDGDTQQQEDASASVESLRRQRRSRPRTNKERRGPAVDAKLKRKLASLEECETKTK
TKQKQAQMRKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcagagctgcggactcagagggatctaaatcgaaggggaaagggaagaagaga
cccgctgagaagtctgctccttctctctccagaacacgacgagacaagaaagatggagaa
acatctaaagcaggaccccctcccctcaagtttgcaggagtccagaggagaggcgtgcac
gggagcatcctgcactacatttataagaacactctgggacaaagtcttcactcacagatg
agacagtgtctccaggagccgttcatccgatctctatcgtcgtatcattttcacagcgcc
accagccccttcgaccgcaggatcacctgtctggagtggaatcctgttcaccacaccact
ctggccgtgggctccaaaggtggagacattcatctgtgggactatgaggtccccacgaaa
aaaagctttattcaggggaatggtgcaggagactttatcggagggatgaagttttgcccc
acagactcctccagagtgtacgtggcctctggtgagggaaatctgagcatgcacagcttt
gagggcctcacacccaccacactgtccagaactcaagactgtggccatgatcaccacaac
gtttgttactggtactgctgtgtcgatgtgtctgtgagcaggcagatgcttgtgacagga
gacaatatgggacagctgttactcctcggactggatggacaaaagattttcagcaacaag
ttgcacaaggccaaagtgacccacgcagagttcaactccagatgtgactggttgttggcg
acggcctcagttgaccacacggtgaagctttgggacctgagaaacataaaggaccagaag
agtttcctgcacgatctgcctcatgaaaaggctgtcaactcagcctgtttcaatccgttg
gactgctccaagctactcaccacagatcagtacgacgagatacgcgtctactcatcctgt
gattggtcgaagcctcaacacatcatccaacatcctcacagacagtttcagcatctcaca
cccatcaaggcaacatggcacccggtgtacgacctgattgtggccggccgctaccctgac
gaccgtgtttgctcaggtgaccagagaaccatcgacatctatgactccaacacagcagag
cttgtgtatcagctgtacgaccccactgtgtcagggatcaaatctattaacaaattcaat
ctcatgggtgatgtgattggatctggaatgggcctgacggttctagtctgggacaggaac
gagtcactgatacgtgatggggacacgcagcagcaggaggacgcctcagcctcagtggaa
agtctgagacggcagaggaggagtcggccgcgcaccaacaaggaacggagaggtccggct
gtggatgcaaagctgaagaggaaactggcttctctggaagaatgtgagaccaagaccaag
acaaaacaaaaacaagctcagatgaggaagaagtga
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integrated database retrieval system
