Paralichthys olivaceus (Japanese flounder): 109624264
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Entry
109624264 CDS
T06037
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
109624264 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109624264 (rag1)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109624264 (rag1)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109624264 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-RING_UBOX
TRAF3_RING
zf-C3HC4_4
zf-C3HC4_3
U-box
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
109624264
NCBI-ProteinID:
XP_019934373
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MMEEELEMDGPRSYMPAELHHPQPKYSQWKLKLFRVRSMEKAPMPSEIQPEKEVSLESSP
IAAPKIDLDNGLGPGSVMKLCLGGKSKENVEGPGRRVDKKLEEMETHMTHLRCFCRLCGM
ALRKVKGPVHDVHSDLEEESKGVLRQMGCKFTSWPEVILKVFKVDVTEDTESVHPLSFCH
RCWTAAIRGGGFCCFSKTRVPEWKPHSSLCHLCSPKKCSFQRTGRKRRKTTPRVQSLAKR
SRWEHVDNTAVGEWKVLKPFGDRHHHPVLRGWRKPSIQREQWVKNITHCQKHHLSTKLIT
EKLPVDFLYSFTCMVCDHLLFDPVQSPCGHLFCRSCIAKYNHVLGPQCPACNLPCAPDEL
TPPTKAFLSALHSLPLLCPRGGCGERVRLDSFNAHCLDHELNENDANKQSPELDKFLLAN
KGGRPRQHLLSLTRRAQKHRLKDLKNHVRVFTDREEGGDLKSVCLTLFLLALRSVNEHRQ
ADELEAMMQGRGLGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAE
KELLPGFHQFEWQPALKTVSASCNVGIINGLSGWTSSVDDSLAETITRRFRYDVALVSAL
KDLEEDIMEGLREAGMEDSACTAGFSVMIKECCDGMGDVSEKHGGGPAVPEKAVRFSFTI
MSVSVQADDKEGEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPIVAERNAMKE
SRLILSIGGLPRFFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSSRAEASQNMVLH
SITRSHEENLERYELWRTNPFSESADELRDRVKGVSAKPFLETQPTLDALHCDIGNATEF
YKIFQDEIGEVYEKVNPSREERRSWRAALDKQLRKKMKLKPIMRMNGNYARRLMTLEAVE
VVCELVPSEERRAALRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSSTF
KYRYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFEL
EDVLKHHWLYTSKYLQKFMEAHKGSAKALQGCINPVETQDDETVEVNDF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggagctggagatggatgggcccagatcctacatgccggctgagcttcac
catccccagcccaagtactctcagtggaagttaaagctgtttagggtgaggtccatggag
aaggcccctatgcccagtgagatacaaccggagaaagaagtctcgttagagagctcacct
attgcagctccaaaaatagatttagataacggtttgggtccagggagtgttatgaaattg
tgccttgggggaaaaagcaaggaaaatgtggaaggcccaggtcggagggtagataagaag
ctggaggaaatggaaacccacatgacccacctcaggtgtttctgccgtctctgtggtatg
gccttgaggaaagttaaaggaccagtgcatgacgttcacagtgatctagaggaggagagt
aaaggtgtcctgcggcaaatgggttgcaagttcacaagctggccagaggtcatcctcaaa
gtcttcaaagtggacgtgaccgaggacacggagtctgtccaccctctctccttctgccat
cgctgctggacagctgccatacgaggagggggcttctgctgcttctccaaaacaagagtc
cccgagtggaaaccccactcctccctctgccacctttgctcacccaagaaatgttcattc
cagcggactgggaggaagaggaggaagactactcccagagtccagagcctcgcaaagagg
agcaggtgggagcatgtcgacaacaccgctgtcggagagtggaaggttctgaaaccattc
ggagaccgtcatcaccaccccgtgctcaggggctggaggaaacccagcatccagagagag
cagtgggtgaagaacatcacccactgccagaaacaccacctgagtaccaagctgatcact
gagaagctccctgtggacttcctgtattctttcacctgcatggtgtgtgaccacctgctc
tttgatccggttcagtccccctgtggacacctcttctgccgcagctgtattgcaaaatat
aaccacgttctgggacctcagtgcccggcctgcaacttgccctgtgcccctgatgagctc
accccgcccaccaaagcctttttatcagctctgcattctctgcctctgctctgccccaga
ggaggctgtggtgagcgtgtaaggctcgactcatttaacgctcattgcctggaccatgaa
ctaaatgagaacgatgcaaacaagcagtccccagaacttgataagttcctgcttgccaat
aaaggggggcggccccgtcagcacctgctgtcgctaacccgtcgtgcccagaagcatcgg
ctgaaggacctgaagaaccatgtgagggtgttcacagacagagaggaaggtggcgacctg
aagtctgtgtgtctgaccctgttcctgctcgcgctgagatctgtaaacgaacaccggcag
gcagatgagctggaggccatgatgcaaggcagaggtcttggtttgcatcctgctgtgtgc
ttggccattcgagtcaacactttcctgagctgcagccagtatcacaagatgtaccggact
gtcaaagcgaccagtggccgccagatttttcagccgctgcacaccctccgagctgcagag
aaggagcttctccctggctttcaccagtttgaatggcagccggctctcaaaactgtgtcc
gcttcttgcaatgttggcattattaacggtctctctggatggacatcctcagtggacgac
tccctggctgagaccatcactcggcggtttcgctatgatgtggcactggtgtcagcatta
aaggacctggaggaggacatcatggaggggctgagagaggctgggatggaagacagcgct
tgcaccgcaggtttcagtgtcatgatcaaggaatgctgtgacggcatgggcgatgtcagc
gagaagcacggcggaggaccggctgtcccagagaaggctgtacgtttctccttcactata
atgtctgtctccgtccaggccgatgataaggagggggaggtcaccatcttcaccgagccg
aagccaaactcagaactttcctgtaagcccctttgcctgatgtttgtggatgagtcagac
cacgagacactcacagctgtcctggggcctattgttgcggagcgtaacgcaatgaaagag
agcaggctcatcctatccataggtggtctgcctcgctttttccgcttccacttcagaggc
acaggatatgatgagaagatggtgcgagagatggagggtctggaggcctcaggctccacg
tatatctgcactttgtgtgactcaagtcgagctgaggcttctcaaaacatggtgctgcat
tccatcacccgcagtcacgaggagaacctagaacgttatgaattatggagaacgaacccc
ttctctgagtctgcagatgagctgcgagacagagtcaaaggcgtctctgccaagcccttc
ttggagacccagcccaccctggatgcgttacactgtgacattggcaatgccactgagttc
tacaaaatcttccaggacgagattggggaggtgtatgaaaaggtcaaccccagccgggag
gagcggcgcagctggagggcagccctggataaacagctgaggaagaagatgaagctcaaa
ccgataatgaggatgaatgggaactacgcccgcaggctaatgaccctggaggctgtggag
gtggtgtgtgagctggtgccctcagaggagaggcgggcggccctgagggagctgatgagg
ctctacctccagatgaagcctgtgtggcgtgccacctgtccagccaaggaatgccccgac
cagctgtgccgctacagcttcaactcccagcgctttgccgacctcctctcctctaccttc
aaatacaggtacaacggcaagataaccaactacctccacaagaccctggcccatgtgcct
gagatcatagagagagatggatccattggagcatgggccagcgaggggaacgagtcggga
aacaaactgttcaggcgtttccggaagatgaatgcacgtcagtcgaagacctttgaactg
gaggacgtgctgaaacatcactggctctacacctccaagtacttgcagaaatttatggag
gcgcacaaaggctcagccaaagctctgcaaggttgcatcaaccctgtagagacacaggat
gatgagactgtggaagtgaatgatttttga
DBGET
integrated database retrieval system
