Paralichthys olivaceus (Japanese flounder): 109624789
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Entry
109624789 CDS
T06037
Symbol
thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109624789 (thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pov04990
]
109624789 (thsd4)
Domain-containing proteins not elsewhere classified [BR:
pov04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
109624789 (thsd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
ADAMTS_CR_3
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
109624789
NCBI-ProteinID:
XP_019935263
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MQRACVWIIRVSVLLMLLCSDHLDCQHTTDHRKVHQRAEPQQEFKAEHGEIQGSWGAWGS
WTTCSRSCGKGVQEQSRPCLPAYTPSQHPSRRSGSHPQQPGHVISAVQPTLSLHSDTVRP
SNSSRRGELRKETRPSGRRRLGHITPGRYGYGRAPYVAPLQTDAGQGSGTAGPRRQRRSA
AAHHPTARGQGGQRSNNLDPSNNLHRYSVPYMQPRTQQPTNNQVWAPLYQPGSAHQAEEQ
QLQSGSQTSGPQQHHARPYNPLPTSFCAGERARYRICNSNACPPSSSNIRAGQCSSYNNR
PFMGRLYEWEPFNEVPGAQHCELNCRAIGFRFYVRQSDRVIDGTPCGQNDTSLCVAGKCT
SLGCDDYLGTGRVMDKCGMCGGDNSSCRLVSGVFKHSLSKVGYHKIVEIPEGATKINITE
MVKSRNYLALRSRSGRSIINGNWAIDRPGKYEGGGTMFTYRRPNEISSTAGESFLAEGPT
NEILDVYMIFQQPNPGVHYEYILPSEEIVGPQQPNLRPEENTVNGQGGYDQHSNTHRENF
DTVGGGRYAPRLPDNQVPAVQPPRRERDHNWKLSGVTECSASCGKGFRYSVFQCVHRLNH
AQASDALCDSSSKPSPQEEACNLQPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANR
TLNVHTSRCRHLERPETASTCQLKICSEWQIRSEWTACSVPCGLGQRSREVRCVSNVGDF
VPDEECNMNLRPVDAENCDMGACAKSWFYTDWGNKCSAECGMGVQTRGVLCLTNHISSLP
LEGCGSQRPPDTQVCNNGPCENRIEWFTGPWSQCSAECGAGSQQRSVVCLMRSDEGFSVM
PPYECSSLDRPLSQQSCNLKDCGVKWYHTDWSACSKTCEGGFRVREVRCLSDDRLSSEGC
NELQRPAEKEDCNPEPCIPSIDENCKDKYFNCNVVVQARLCVYDYYKMTCCASCSRVTHR
QTIHRGRS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagcctgtgtctggattatcagagtttctgtgctgctgatgttgctttgctca
gaccacctggactgccagcacacaacagaccacaggaaggttcatcaaagggcagagccc
caacaggagttcaaggcagaacatggagaaattcagggctcctggggtgcctgggggtcc
tggacaacctgctcccggagctgtggaaaaggggtacaggagcaaagcaggccctgcctg
cctgcttacactccatcccaacatccgtcaagaagatctggaagtcatcctcagcaacca
ggccacgtcatctcagcagtgcagccgacactctctctgcacagtgacacggttaggcct
tccaacagcagtcgtcgtggtgagctgaggaaggagactcgaccaagtggacgaaggagg
ctcggtcacatcaccccagggaggtatggctacggaagagctccatatgttgctccgttg
caaacagacgcaggccagggatcggggacggctggcccccgcagacagagacgctcggca
gctgcccaccaccccacagctagaggccaaggtggccagaggtcaaacaacctggaccct
tctaacaacctccaccgctacagcgtaccctacatgcagccaaggacacagcagcccaca
aataaccaagtctgggcccccctctaccagcctggatcagcccaccaggctgaggagcag
cagctacagtcaggcagccagacctccgggccccagcagcaccacgcgagaccctataac
cctttacctacttctttctgtgcgggggagcgtgctcgctacaggatctgtaacagtaat
gcctgtcctccatccagcagtaacatcagggctggtcagtgttcttcttacaacaaccga
cctttcatgggcagactgtacgagtgggaacccttcaacgaggttcccggggctcaacac
tgtgaactcaactgtcgggccatagggttcaggttctacgtgcggcagtcagacagggtg
attgatgggacgccatgtggacagaatgatacctctctgtgtgtggcgggaaagtgtacg
agtctcggctgcgatgactaccttggaacaggaagggtgatggacaagtgcggcatgtgt
ggaggcgacaactcttcctgcaggctggtctctggagtatttaaacacagtctgtccaag
gtcggctaccacaagatagtggagatcccagagggcgccaccaagatcaacatcacagag
atggtgaagagccggaactacctagctctccgaagccgatcggggcgatccatcatcaat
ggaaactgggctattgaccgaccaggcaaatatgaaggaggggggaccatgttcacctac
cggcgacccaacgaaatcagtagcacggccggggagtccttcctcgctgaagggcccacc
aatgagatcctggacgtttatatgatcttccagcagccgaaccctggtgttcattatgag
tacattctcccttcagaggaaattgttggccctcagcaaccaaacctcagacctgaagag
aacactgtgaatggtcagggaggatacgaccaacacagtaacacacaccgggaaaacttt
gacacggtgggtggagggaggtatgctcctcgtctccctgacaaccaggtacccgccgta
cagccacctagacgagagagagaccacaactggaaactgagtggtgttacagagtgcagc
gcctcctgtggtaaaggattcagatactccgtctttcagtgcgtccaccggctgaaccat
gcccaggcgtcagatgctttgtgtgacagcagcagcaaaccgagtccacaggaagaggcc
tgcaacctgcagccctgtccagcattctgggatattggagagtggtctgagtgcagcaag
acctgcggcctgggtatgcagcaccgacaggtcctgtgtcgccaggtgtacgccaaccgc
accctcaacgtccacacgagccgctgccgacacctggagcggccagaaacagccagcacc
tgccagctgaagatctgcagtgagtggcagatccgctccgagtggaccgcctgctctgtg
ccgtgtgggctgggtcaaaggtcgcgggaggtacgttgtgtcagcaacgtgggcgacttt
gtcccagatgaggagtgcaacatgaatctgcggcctgtcgatgcagagaactgcgacatg
ggagcctgtgccaagagctggttttacactgattgggggaataagtgctctgctgaatgt
gggatgggtgtacagacgagaggagtcctctgtctgaccaatcacatcagcagccttcct
ctggaggggtgtggcagtcaacggcctccagacactcaggtctgcaacaacggcccctgt
gagaatcgcatagagtggttcacaggcccctggagccagtgctctgcagagtgtggtgca
ggcagccagcagaggtcagtggtgtgtctgatgagatcagatgaaggattctccgtcatg
ccaccatacgagtgctcctctctggatcgacccctcagtcagcagagctgcaacctcaag
gactgtggagtaaagtggtaccacactgactggagtgcttgttcaaaaacatgtgaggga
ggtttccgtgtgcgggaggtgcgctgcctgtctgatgacaggctctccagtgagggctgc
aatgagctgcagagaccagcggagaaggaggactgcaacccagagccctgtatacccagc
atagatgagaactgcaaggacaaatacttcaactgcaacgtagtggtccaggctcgcctc
tgtgtgtacgattactacaagatgacgtgctgcgcttcgtgctcacgtgtgacccacaga
cagacgattcacaggggccgcagctag
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