Paralichthys olivaceus (Japanese flounder): 109624887
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Entry
109624887 CDS
T06037
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pov02000
]
109624887 (tmc3)
03037 Cilium and associated proteins [BR:
pov03037
]
109624887 (tmc3)
Transporters [BR:
pov02000
]
Other transporters
Pores ion channels [TC:
1
]
109624887 (tmc3)
Cilium and associated proteins [BR:
pov03037
]
Other cilia and associated proteins
Stereociliary proteins
109624887 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
109624887
NCBI-ProteinID:
XP_019935367
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MSTVSESLVGSSRSLSATKRHKSIRKNSRRIYSAYQDQQGSSDDEDKEDERADSNDPEEM
FQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKLS
RVLYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLA
GAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGGAGYRLPLAY
FLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGA
AIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSL
IIALLDKVNSMSSAVPVSTGNWSDSSSFLATISQPEVDSLSTLVSEISVAEHRNSTIATI
ATVLEVTNISRSISGTVPNQTALFERNTRSQQEQCWETYVGQEMLKLSIIDMIFTVASIL
LIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAF
NVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRP
SQHCGPFSGQEKIYDIISETVASDFPLWFSKVMSYITSPVVVLPALLLLFMLIYYLQAIA
RSLKFTNNQLRMQLQTERTEDKKKVFQMAAARLQAPETAADKNVEQQESDITSQEASIHT
PSPRRNGSVTNFQSPVRHGNSIRTITQSASRADLNRGSGSGSGRSPTVTILPKHRLEHIP
NRPPPFLSGPSGSCRSKSYHHMVYNPPAQYSDNIHSDPLYRKTVRSIHPVEAAGFITAQS
YAGRRGHTRYVIVNEHEPRKKLLRSATRIPRHYLMEEPAEILELYPRNIKRYVPRTTHHQ
LHPHRAHPSQQHLSEEEEEEEEGKSRRRMSLGKAHRPHSLSDLHQPAHFYVGDRVESHVS
MAKDSHAARGRYGAQEEDEEEDDGGEIDWRDIESHSRPPANVKGADHLLVRTRRHIHSPG
RHCPSPARTRHTESHMKPKTRPKLETPLTESDSASLASSSDQQNSSTDQYIQVIHNKERY
LKSDARQGKLAKKKSKTSFDVNVTESNDLVCSNV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgtctgagtctttggttggcagcagcaggtctctgtctgcaaccaagaga
cacaagagtatcagaaagaactccaggaggatttattcagcgtaccaggaccagcagggc
tcctctgatgatgaagataaggaggatgagcgggcggacagcaatgacccagaggaaatg
ttccagaacattcagtaccagaaggagatcatcgccaatattcggaccagaccctggcca
atgagacgcaagctcaaagttctaaagcaagccagagagattgttctgaagtatgagggc
cgactgaccagaaccagaggctaccagactgcaggagctgatctgctgaagaaactttcc
cgtgtcctatacaacattgtggttctgttcattccctgggaagtgaggatcaagaaaatt
gaaagtcactttgggtcaggcgtggcttcctactttatcttcctgcgctggttgtttggg
atcaacattgtcctcaccatcatgactggagccttcattgttctaccagagctgctggct
ggagcaccatttggaaccacaaggagtaaaactatccccaaggagcatctggcttcagcc
caggacttggacaccatctggtctcttgggggctacctgcagtactcagtgttattctat
ggttactatggcagggtgaggaaaattggcggtgctgggtaccgtttgcccctcgcctac
ttcctggttgggatggctgtctttgcctacagtttcatcattctcttaagaaaaatggcc
aagaactctcgtctgagtttggccagtgcctcagatgagaactttacgttttgctggagg
gttttctgtgcctgggattatttgattggaaacccagaggctgcagagagcaagggagcc
gccattgtcaacaacatcagggaggccattgtcgaggagcaagaaaagaagaaggacaca
agtttggcagttctgattagtctgcgcatcttagccaacatcctggtactgctgtctctg
gctggcagcatttacatcatctactttgtagtggaccgttctcagaagctggagcaggag
aagccagagctgacgctgtgggagaagaatgaggtgagtgtggtggtatctctcatcacc
atgatcgctccgtccgcctttgagcttgtggctcagctggagatgtaccacccacgaacc
tcgctgcgattccagctggccagggtgctggttttatacctgggcaatctctacagcctt
attattgccctccttgataaagtcaacagtatgagctctgctgttccagtgagcacaggt
aattggtctgactccagttctttcctggccaccatctctcagcctgaggtagacagcctc
tccacccttgtgtctgagatctctgtggctgaacatcgcaacagcaccatagcaaccatc
gccacagtgctggaagtcaccaacatcagccggagcatctccgggactgtccccaaccag
acagcgctgtttgagaggaacacccgctctcagcaggaacagtgctgggagacctacgtt
ggacaggagatgctgaagctgtccatcattgacatgatcttcactgtggccagtattctg
ctcattgacttcatcagaggtttggtggttcgctacctgagtgactgctgctgctgggat
ttagagagcaagtttcctgaatatggagaattcaaaatagctgagaatgtcttgcatctg
atttacaaccaaggaatgatctggatgggagcgtttttctctccctgtcttcctgccttc
aacgtgttgaagctgattggtctgatgtatctgaggagctgggccgtcctcacctgtaat
gttccacatcagcaggtgttccgggcctccagatcaaacaacttctacctggccatgctg
cttttcatgctgtttctgtgcatgctgcccaccatctttgccatagtcagatacagacca
tcccagcattgtggcccattcagtggtcaagagaagatttatgacatcatctctgagaca
gtggccagtgacttccccctgtggttcagtaaagtgatgagttacataaccagccctgtt
gtagtgctgccagcactgctgctgctgttcatgctgatatattatctccaagccatagcc
agatccctcaagttcaccaacaatcagctgaggatgcagctccagactgagcggactgag
gacaagaagaaagtctttcaaatggctgcagcaagactgcaggctccagagactgctgcc
gacaaaaacgtggaacagcaggagagtgacatcacgagccaggaggcctccatccacacg
ccttccccccgcaggaatggcagcgtcacaaactttcagtcgcctgttcgtcatggaaac
agcatccgcaccatcacccaatctgcatccagggcggacctgaaccgaggaagtgggtct
ggatctggcagaagtccaacagtgaccatactgcccaaacacaggctggagcacatccct
aacaggcccccaccatttcttagtggccctagtggatcctgtaggtccaagtcctaccat
cacatggtgtacaatcccccagctcagtattctgacaacatccactctgaccccctgtac
aggaagacggtacgctcaatacatcctgtcgaggctgctgggtttatcactgcacagagt
tatgcaggacgccgcggtcatactcgctacgtgattgtcaatgagcacgagcccaggaag
aagctgctgcgctcagccactcggatccctcgccattacctcatggaggagcctgcagag
atcctggagctgtacccacgcaacatcaaacgctatgttccccgcaccactcaccatcaa
ctacatcctcaccgggcccacccatcacagcagcatctgagtgaagaggaagaggaggag
gaggaaggaaaaagcaggagaagaatgtcactggggaaggctcatcggccccattccctc
tctgacctccaccagcctgcgcacttctacgtcggtgaccgtgtggaaagccacgtatcc
atggctaaagacagccacgcagctcgaggaagatatggagcacaagaagaggatgaagag
gaggatgatggaggagaaatagactggagagatatagagtcacattcacggcccccggcc
aatgtgaaaggagcagaccatcttcttgtgcgaaccaggcgtcacatccattccccagga
agacactgtccgtccccagccaggaccaggcacacggaatctcacatgaagcccaagacc
aggccgaagctggagacccctctgactgagtcagactcagcctccctggcctccagcagt
gaccagcagaacagcagcactgaccagtacatacaggtcatccacaacaaggagcgctat
ctcaaatctgacgccaggcagggaaagctggccaaaaagaagtccaagaccagttttgat
gtaaatgtcactgagtcaaacgacctggtctgctccaatgtatga
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