Paralichthys olivaceus (Japanese flounder): 109624989
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Entry
109624989 CDS
T06037
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109624989 (chd9)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109624989 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HTH_Hrp3
DEAD
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
109624989
NCBI-ProteinID:
XP_019935521
LinkDB
All DBs
Position
Unknown
AA seq
3007 aa
AA seq
DB search
MEFFDDPSLFVGGLEGLDEDEFPTAPSLVDELNLSADFEPLHQVEPLGPGKQQDIMPPVS
TQQVMPTYGQQIDHYIGIKGQNITGQTFSGHRGTGAGGGSTMPEQHGQYHNAAMSQVPQS
NGLFCNSSSPMWGNQDQNGNMFHPVSQQQQHQQQQLCHQQQQLNVRQHIQQQQHQPCRNP
QQEQQHRMRQQLQQQQSHQQQLLNQCQSQQINTQTMSLQQQQHHNFSFHQGSQQVHHSQQ
RAQHQLSVGGQRFQSRALPNKSYLDSQNASLSGTCLQQHQQQHGSYRLTSVGQAFSGSGL
EEPNLPFPMHSSSMVLSLPTCSVSSAPAYQLAPYPAYPGEPEIPSLNQQSLSKASGPTLT
TSVSLTSTVSELSGTVCQFPSTGVMNQQHTKTPGTQVDECPFRALHCSGETQGSSGSSEM
FGESMSCYPTMGSQLPSAQPRSCGAINTNGYQALRDGLLTSEAQDGDLEGLEPPDLLPDL
LPQLEAALSQQDESNCSWASSSMERGHEHSKPPPVEYREEKPRKNANGPGSQVRVLSPPV
KSSSSSSSSSSSSSSSSSSSSEKRTARMTHHQMETSPLDKQEKANRIISEAIAKARQRGE
KNIPRVMSPESFPSSSSQYKTHRDRKHKGNSKARPKMKACRKACIVPSSKPKQKAKIGKI
VIKIGKKKKRKPESSEGESDDDPPPRHTSKDDSKRRSNRQVKRKKYSEELEARLSDEEVK
VIVKAKKSNTAASKEPALQLFVENPSEEDAAVVDKIMSSRVLKKEVSPGVVVEVEEFFVK
YKNYSYLHCEWATEQQLVKDKRIQQKIKRFKMKQAQRALFFANMEEEPFNPDYVEVDRVL
EVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRRMER
PPANLWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFL
EEIYRVGIKAPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYFRDTQ
GRVIRGAYKFQALITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMSLE
HKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQGILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQSNVPNLVNTMME
LRKCCNHPYLIKGAEEKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDR
ASLKLGLDKAVLQSMSGRDNSLGGGGAGGGAVQQQLSKKEIEDLLRRGAYGAIMDEEDEG
AKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAD
IDMDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDTDDTKPKLRRNHDRLNSY
GRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTDRDVESICRALLAYCLVHYRGDDKIK
SFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSAFDIHKAEWLRKHNPEHM
LQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGVDSSEIKIWVPEPDHSEL
PALWWDTISDKCLLLGIYKHGYEKYNTIRADPTLCFLDRVGRPDEKAIAAEQRGNDFMDG
DVDDPEYKPAPALLKDDMEDDASSPGDLVITDNPGDPEAVPVRDGETTYWPSSSVLTARL
RRLITASQRFTKSRQILHIHQTQSQSQQTMILSAPLCPLPPTLSDTLNPKMAAKIERQQR
WTRREEADFYRVVSTFGVVFDPTLGCFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRV
CRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHTSLFERLSLCQMSS
DLPIWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKAAQQQSRTST
PLLHTQHQATSAVLTGSPLPLAQRDTESYGLVPKLEPTSEGEESLEKPGESWSPRQAPAT
PTGLEEKPALETMDNERQMVAARTKPLTPNSSERKPKKASKRGRRETRRGSESNSNGSSS
SSSSRSSSSSSSSSSSSHSGSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEEGKKKVPV
ATSVKGFDEDSVASLSTTQDETQDTHVAENGINHNSSHPFKGGGYMLAASYWPKDRVIIN
RLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVA
ENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEDGPQAQQQYLARLQELQSASDTGLAD
ITKPQCSFQTVPPALTSQMRLNGVLDGQPVVKKRRGRRKNVEGMDLLFMNRSKVPAVPDQ
VPPGWGGIGQVTTGVTSAPSYSQSSSQVPADTESRVPVINLKDGTRLAGDDAPRRKDLEQ
WLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQII
NRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMYDRILTGPIVP
EEVSRRGRRPKNPLAKTAVGGPTTAASTLGLNPLLANGLLSGMDLTSLQAFQQNLQSLQS
LQLTGLMGLPSDSNLAASNLAAMFPMMLSGMAGLPNLLGMGGMLGKPAQEGAGGSEEKTK
GTTSGAAGEPSASKAPSQTSDTKGERTESLSTTPSSASISSSSATAPQSASAASAASSHP
LSLNPLLLSSMLYPGMLLTPGLNLPVSATQSQSSSTDPTIPPNPIPPPPKASKSSTRERV
RPAAAEKDGEEEEALEEALDDDDEEEEESAEQKENSGPEGSGKAETSSSDSGSSSSSSDD
SDSSDED
NT seq
9024 nt
NT seq
+upstream
nt +downstream
nt
atggaattctttgacgatcccagcctctttgttggaggtttggaaggactggacgaggat
gagtttccaacagcaccatcacttgtggatgagctgaacctcagtgctgattttgagccc
ctccaccaagtggagcctctgggtccaggaaagcagcaagacataatgccaccagtttct
acccaacaagtgatgcccacttatggtcaacagatagatcactacattggcattaaggga
cagaatattacagggcaaacattttctggtcatagaggcacaggtgctggaggtggcagc
acaatgccagagcagcatggccagtaccacaatgcagccatgagccaagtgcctcagtcc
aatgggctcttttgtaacagtagcagtccaatgtggggcaaccaagaccagaatgggaat
atgttccaccctgtatctcaacaacagcaacatcagcaacaacagctttgtcatcagcag
cagcaacttaatgtcagacaacatatacaacagcaacaacatcaaccctgccgtaatcca
caacaggagcagcagcacagaatgaggcagcagctgcaacaacagcaaagtcatcagcaa
cagctgttaaaccagtgccagtcccaacaaattaacacacagactatgtccctgcagcaa
cagcagcatcacaatttctcttttcaccagggaagtcagcaagttcaccatagtcaacag
cgggctcagcaccaactatctgtaggaggacagagattccaatcaagggctctgccaaac
aagtcttatttggatagtcagaatgcttctctgagtgggacttgcttacagcaacatcag
cagcaacatggttcctaccgtttgacctcagtaggccaggccttctctgggtcaggactg
gaagagccgaacctgcccttccccatgcattcatcatctatggttctctccctgcccaca
tgctcagtcagttctgcccctgcttaccaactggctccgtaccctgcttaccctggagag
cctgaaatacccagtctcaatcagcaatctttgtccaaagcctcagggcccactctcacc
accagtgtatctctcacttccacagtatctgagctctcagggacagtgtgtcagtttcca
tccacaggagttatgaatcagcagcacactaagaccccaggtacccaagtagatgaatgt
cctttccgggccctacattgttctggtgaaactcaaggaagcagtgggtcatctgagatg
tttggtgaatccatgagctgttacccaactatgggcagccagctgccctccgcacagcct
cggagctgcggtgccatcaacactaatggataccaggctttgagagatggtctcctcaca
tcagaggctcaggatggagacttggagggactggagcctcctgacctcttgcctgaccta
ctgccccagctggaggctgctctcagccagcaggatgaatccaactgttcctgggccagt
tccagcatggagaggggacatgagcacagtaaaccaccacctgttgagtacagggaagag
aagccccgaaagaatgctaatggtcctggcagccaggtacgggtcctcagccctccagtg
aagagcagctcatcgtcttcttcctcttcctcttcgtcttcatcctcatcaagctcttcg
tccgagaaaaggacagcgcggatgacgcatcatcagatggagacatcgccactggacaag
caggagaaggccaataggataatatcagaggctattgcaaaggcccggcagcgcggggag
aagaacatcccccgggtcatgagccccgagagcttccccagctcttcctcacagtacaag
acccaccgtgaccgcaagcacaaaggaaacagcaaggcacggccgaaaatgaaggcatgt
aggaaggcctgcattgtcccctcctccaagcccaagcagaaggccaagattgggaaaatt
gtcatcaagattggaaagaagaaaaagcgtaagccagagtcttcagagggggagtctgac
gatgaccctccacctcgacacacctctaaagatgactctaagaggagatctaatcgccag
gtgaagaggaagaagtactctgaggagctggaagccaggttgtccgatgaggaagtcaaa
gttatagtcaaggccaagaaaagcaacactgcagcatccaaggaacccgctcttcaactc
tttgttgaaaatcccagtgaagaagatgctgcggttgtcgacaaaatcatgtcttctcgt
gtccttaagaaggaggtctctccaggagttgtggtggaagtggaagagttttttgtcaaa
tacaaaaactactcctacctacactgtgagtgggccacagagcagcagctggtgaaggac
aagaggattcagcagaagatcaaacgcttcaagatgaaacaagcacagagggcactcttc
tttgcaaatatggaggaggagccctttaaccctgactatgtagaggtagacagagtgctg
gaggtgtcgtattgtgaggacaaagacacaggagaggaggtggtgtactacctggtgaag
tggtgctctctgccttatgaggacagcacctgggagctaaaggacgatgtggatcagagc
aagattgaagagtttgagcagctgcaggcagtcaagccagactcacgtaggatggagcgc
cccccggccaatctgtggaagaagagggagcagtcgagggaatacaggaacggcaacagc
ctcagggactaccagcttgagggagtcaactggctccttttcaattggtataacagacgg
aactgcatcctggcggatgagatgggcctgggaaaaactatccagtccatcacgttccta
gaggagatctatcgtgtgggcatcaaggctcctttcctcattattgccccgctctccacc
atcgccaactgggagcgcgaattccgcacttggacccacctcaatgtgatcgtctaccat
ggaagcatggtcagcaggcagatgctgcagcagtacgagatgtatttcagggacacacag
ggccgtgtgatacggggcgcttacaagttccaggctttgatcaccacatttgaaatgatc
ctgggaggctgtcctgagctcaacgccatagagtggcgctgtgttatcatcgacgaagcc
caccgcctcaagaacaagaactgcaagctgttggagggcttcaagctcatgagtctggag
cacaaggtcctgctgacagggactcctctccagaacacagtggaggaactcttcagtctg
ctccacttcttggaacctgcacgcttcccctctgagaacaccttcatgcaggagtttgga
gacctcaagacggaggagcaggtgcagaagcttcagggaatcctgaagcccatgatgctg
cgccggttgaaggaggacgtggagaagaagttggctccgaaagaggaaaccatcatcgag
gttgagctcaccaatattcagaagaaatactaccgcgccatcctagagaaaaacttctct
ttcctggctaaaggagctggccagtcaaacgtacccaatctggtcaacactatgatggag
ctgagaaagtgctgcaaccacccctacctcatcaaaggggcagaagagaagatcctggag
gacttcagggaagtttacagccccactgccatcgactttcacctgcaggccatggtgcag
tctgcagggaagctggtcctcattgacaaactgctgccaaagatgaaggcaggagggcac
aaagtactaatcttctcccagatggtgcgctgcctggacatcttggaagactacctcatt
cagagaaggtacttgtatgagcggatagatggacgtgtgcgtgggaatctgcggcaggct
gccatcgaccgcttcagtaagcccgactcggaccgcttcgttttcttactgtgcacacgg
gccggtggcctgggaatcaacctcacggcagcagacacctgtatcatctttgactctgac
tggaacccacagaacgacctgcaggcacaggctcgctgccaccggattggtcagaacaag
gcggtgaaggtgtatcgtctgatcaccaggaactcgtacgagcgagaaatgttcgatcgt
gccagtctcaagcttggcctggacaaagcagtgctgcagagcatgagtggtcgggataac
agtctgggaggaggaggtgctgggggaggggcagtgcagcagcagctgtctaagaaggag
atcgaggatctcctgcgccgtggtgcttacggggccatcatggatgaggaggatgaaggg
gccaaattctgcgaggaggacatcgaccagatcctccaacgccgaacaaagaccatcacc
atagagtctgaaggacgaggctctacctttgctaaggccagttttgtggcatctggaaac
cgcacagacatttctctggatgaccccaacttctgggacaagtgggccaaaaaggctgac
atcgatatggatatggtcaatggcagaaatagtttggtgatcgatactcctcgtgtcaga
aaacagacgaggccattcagcgccaccaaggatgagctggcggagctttcagagggcgaa
agcgacactgacgacaccaaaccgaagctccggcgaaaccatgaccgactcaacagctac
gggcgcacagagtgtttcagagtagagaagaacctgcttgtatatgggtggggtcgatgg
aaggacattctcaaccatgggcgtttcaagaagcagttaacagaccgggatgtagagtcg
atctgcagagcgctactggcatactgcctggtccattaccgtggagatgacaaaatcaaa
agcttcatgtgggacctgattgctccgactgaggatggacgcacaaaggagctgcagaat
cacctgggtttatctgccccagtcccccggggcagaaagggtaagaagatgaagacacag
tcaagtgcttttgacatccacaaagcagagtggctcaggaaacacaacccggagcacatg
ctgcaggacgatggctacaagaaacacctcaaacaccactgcaacaaggtgctgctcagg
gtcagaatgctctactacctgaaacaagaggtgataggaagccaggcccagaaagtgctg
gacggcgtggactccagtgagataaagatttgggtgccggagcccgaccattcagaactg
ccagccttgtggtgggataccatctccgacaagtgtctactcctgggtatatataagcac
ggttatgagaagtacaacactattcgtgcagaccctacactgtgcttcttagaccgcgtg
ggacgaccggatgagaaggccatcgctgccgaacagagaggcaatgattttatggatgga
gatgtggatgatccagaatacaagcctgctcctgctctactgaaggacgatatggaggat
gacgcctcttctcctggagatttggttatcacagacaatcctggagatccagaagcagtt
ccagtgagagacggtgaaaccacctactggccatcgtcctcagtgttgacagccagactg
aggcgtctgatcacagcctcccagcgcttcaccaaaagtcggcagatcctccacatccac
cagactcagtctcaatcccagcagaccatgatactgtctgctccgctctgcccgctgccc
cccacactcagcgacaccctcaaccccaagatggctgctaagattgaacgccagcaaagg
tggaccaggcgagaagaagcagacttctaccgggtggtctccactttcggtgtagttttc
gacccaaccctcggctgcttcgactggaccaagttcagggccatggctcggctgcacaag
aagactgacgagagcctgcagaaatacctgtgtgctttcaccgccatgtgcagacgggtg
tgccgcctgccacccaaggagggagactctgcggttgacccgtctctcaccatccagccc
atcacagaggagcgagcgtctcgcaccctgtacagagtggagctgcttcgccaggtgagg
gaacaagtccttcgacatacatcactctttgagcgcctctcgctttgccagatgagctct
gacttacccatctggtgggaagctggtacccatgaccgtgatctgctaattggtgcggcc
aagcatggagtgagtcgcacagactaccacattctgagagaccctgagctcagcttcatg
gctgcccaacgcaactacagccaaactaaagctgcacagcagcaatcacgcacatccaca
ccactcctccacactcagcaccaggccaccagtgcggtgttgacaggctctccgttgcct
ctggcccagagagacacagagtcctatgggcttgtgcccaaattggaacccacctcagag
ggggaggagagcttggagaaaccaggcgagagctggagccctcgtcaagcaccagctact
cccacaggtctcgaagagaagcctgctctagagacgatggacaatgagaggcagatggtg
gcagcacggaccaaacctctcacacccaactcctcagagaggaaacccaagaaggccagc
aagaggggccgccgggagaccaggcgtggctcagagtctaactcaaatggctcctcttca
agctcttcctcccgctcctcctcttcatcatcttcctcttcttcctcgtcacattccggg
tctagctcctcctcttcctcatcttgctcctctggctcttcatcgtcctcctcctcgtcc
tcctcatcttctgatgacagcgaaagtgagggagaggaaggaaagaagaaagtgcctgta
gcaacaagtgtaaagggctttgatgaggacagtgtggcatcactgagcacgacacaggat
gaaacacaagacactcatgtggctgagaatggaatcaaccacaacagctcacatcctttc
aagggaggaggatacatgctcgctgcatcctactggccaaaggatcgtgtgatcatcaac
cgcctggacagcatctgccaggcagtgctaaagggcaagtggcctggaacccgcagggta
tatgagcctggaggtgctgtggcctccttctacaccaccaagctgctggacaacgccaac
agcctgtgcgaggacccctctgcctcgccacaggggtcaaaggtgaccaagcatgttgca
gaaaacaaggagttctcagtaaaactcaacgatcaggagggaggtctgaagttgaccttc
cagaaacagggtctacctctgaaaaggcccctggagtccgaggatggcccccaggcccag
cagcagtacctggcccgccttcaagagctgcagagcgcctcagacacaggactggctgat
atcaccaagcctcagtgcagcttccagactgttcctccagctcttactagtcagatgagg
ctgaacggagtcctggacggccaacccgtggtcaagaagcgaaggggaaggaggaagaac
gtagagggaatggacctgctcttcatgaacaggagcaaagtccctgctgttcctgatcag
gtaccgccaggttggggtggtatcggccaggtgaccacgggggtgaccagtgcaccaagc
tacagccagagctccagtcaggtccctgcagacacagagagcagggtcccagtcatcaac
ctcaaagatggcacccgccttgctggggacgacgcccccaggaggaaagatcttgaacag
tggttgaaagagcacccaggctttgtagcagatacaggagcgttcattcctggtgtaaat
aagatgcaaatgcagttccacttccaggacggtcggccaaagcagaagaggcaccgctgt
aggaatcccaacaagatcgacgtcaacagcctgacaggagaggaacgcgtccaaatcatc
aacaggagaaatgcacgcaaggttggtggagcctttgctcctcctctgaaggatctgtgc
aggttccttcaggagaacccggagtacggagttccacctgaatgggcagatgtggttaaa
cagtcgggttacctcccagagagtatgtatgacaggatcctgacaggacccattgttcct
gaggaggtgagccggcgtggacgtcgacccaagaatcctcttgcgaagacggcggtagga
ggacccaccacagcagcctccacccttggcctgaatcccctgctggccaacggcctcctc
tctggaatggacctcaccagcctgcaggccttccagcaaaacctccagagcttacaatcc
ctgcagctcacaggactgatggggctgccatccgacagcaacctggctgcaagcaaccta
gccgccatgtttccaatgatgctatctggtatggccggactgccaaacctgcttggcatg
ggcggcatgcttgggaagcccgctcaggagggtgcaggaggctcagaggaaaagacaaag
ggaaccaccagtggtgcagcaggagagccgtctgcctctaaagccccttctcagacctca
gacaccaaaggagaaaggacagagagtttgagcacgactccttcctcagcgtccatctcc
tcttcctcggccactgccccacaaagtgcttcagctgcctccgcagcctctagtcaccca
ctgtctcttaaccccttgttactctccagtatgctttacccagggatgcttctcactcca
ggccttaaccttcctgtgtctgccacacagtcgcagagctctagcactgacccaacgatt
cctcctaatcctattcctcctccgccaaaagcctccaagtcatcgacacgggagagggta
cggccagcagcagcagaaaaggacggtgaggaggaggaggcgttagaagaggctttggac
gacgacgatgaagaggaggaggagtctgcagaacaaaaagaaaacagtggtcctgaaggt
tcgggtaaagccgagacgtcttcatcagattctggaagctcctcctcatcctcggatgat
tcagactccagtgatgaggactga
DBGET
integrated database retrieval system
