Paralichthys olivaceus (Japanese flounder): 109625109
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Entry
109625109 CDS
T06037
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109625109 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109625109 (tgfbrap1)
Membrane trafficking [BR:
pov04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109625109 (tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
DUF7742
TPR-S
SIKE
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
109625109
NCBI-ProteinID:
XP_019935762
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYVGTNDCFIHHFLLDEVTSSKGKL
SYSPQKLLHKYLGLKKPVAELRAASALERLIVLCDGIVFLVDMVTLETVPSAAGGGAKIR
GVTAFCINENPVNGDPFCVEMGILSSKRRTVQIYMVYEDRVQLVKEVTTPEQPSAVSLDG
YFLCLALATQYMILNYNTGASQDLFPYNSDERRPIVKTVGREEFLLAAPGGLGMFANAEG
VSQRAPVNWSESVIGAAVCFPYVVALDESFITIHSMLDQQLKQTLSFRDGHILQDFEGKV
ILASTKAVYVLVPLPLERQIQDLLASHRVEEALTLTEGAQRNIPKDKFQILHKRILQQAG
FIQFGQLQLVEAREHFRKGQLDVRELISLYPLLLPSSSSFTRCHPPLHEFADLNHLAQGD
QEKVLRCKRFLISYLGEVRSTEVANGCREDVDTALLKLYAEQDHDSLLDLVASDNACLLA
DSVPWLEKYHKYYALGLLYHYNGQDSAALQLWIRVEDGDLQDSTRSDLYEYIVDFLCSCS
NLDLVWKYADWALLKNPTIGIHIFTKRPVSKDLPQLNSDDVITYLGKHGQALLLYLEHLV
LERKIQKEKFHTHLAVLYLQRVLSLLSQSPTDEQQLSTARDRLQALLRESNLYRVQLLLG
KMDNCEQLLLERATLHGKLEEHDKALHILVHKLRDFPSAEAFCIWASSCRDSAYQQQLFH
MLLGVYLDGSRPGKSETAAGGGSGDLEMAAVDLLNRHGEVFDAARVLRMLPEGWSMQLLR
PFLGRAVRASMHACRTSQIALGLAHSENLQLLHDRLKERKKPIFVSEKKGCHLCHNTFSE
PDVVCLPGGVPVHTHCVAQRVRDSPTKRLLTNNSNHT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcttttgagcttgtccccgctgtggagcgagatctcctcatgggcgac
aaagctcgcatcaacatagagtgcattgaatgctgtggaaagcacttgtacgtgggcacc
aacgactgctttatccaccactttctgctggatgaggtcacatcttccaaagggaaactt
agttactcacctcagaagctgctgcacaaatacctgggcctcaagaaaccagtcgctgag
ctgcgggcagcttctgctttggagcgcctgatagtactttgtgatggaatcgtgttcctc
gttgacatggtgacattagagactgtgccatcagctgcaggaggcggagccaagatcaga
ggcgttacagcattttgcattaacgagaacccagtgaacggtgatcccttctgtgtggaa
atgggaatactctcctccaagcggcggacagtgcagatttacatggtgtacgaggacaga
gtccagctggtcaaagaggtgaccactcctgagcagccgagtgccgtcagtctcgatggt
tacttcttgtgcttggcccttgctacacaatacatgatcctgaactacaacacaggagct
tctcaggatctcttcccttacaacagtgatgagaggaggcccattgtaaaaacggtcggc
agggaggagttcctcttagcagcacctggtggtctgggaatgtttgccaatgcagaaggg
gtatctcagcgggctccagtcaactggtcagagagcgtgattggtgccgctgtgtgtttt
ccatacgtggtggccttggatgagagcttcatcaccatccacagcatgttggaccaacag
ttaaaacagaccctttcattcagggatggacacattctgcaagactttgaagggaaggta
atcctggcttctactaaggcagtgtatgtcctggtgcctctgccactggagagacagatc
caggacttattggccagtcacagagtggaggaggcgctcaccctcactgagggagcacag
agaaatattcccaaagacaaattccagattttgcacaaacgaatcctccagcaggcgggc
ttcatacagttcggccaacttcagcttgtagaagcaagagaacacttcaggaagggtcag
ctggacgtgcgagagctgatatctctctaccctctactgctgccatcttcctcttctttc
acccggtgccaccctcctctccatgagtttgccgatctcaaccatctggcacagggtgac
caggagaaagtgctgcggtgcaagagattcctcatcagttatttgggagaggtacgaagc
acagaggtggctaatggttgcagagaggatgtggacacggcactgttaaagctgtatgct
gaacaagatcacgacagccttctagacctggtagcttcagacaatgcctgcctgctggcg
gacagcgtcccatggctagaaaaatatcacaaatattatgcacttgggctgctctatcat
tataatggtcaggattcagcagcacttcagttgtggattcgtgtggaagatggggatctg
caagactctacaagatctgacctttatgagtacattgtggactttctctgctcctgctcc
aatctggaccttgtatggaagtatgcagactgggccctgctgaagaatcccactataggc
atccacatctttactaagagacctgtcagtaaagatctgccacaattgaattctgacgat
gtcatcacttacctgggaaagcacggccaggcgctgctcctttatttggagcacctggtg
ctggagaggaagatacagaaagagaagttccacacacacctggctgtgttgtacctgcag
agggtcttgtcactgctctcacagtcacccacagatgaacagcagctcagcactgctaga
gacagactccaggccctactcagggagtctaacctctaccgtgtacagcttcttttaggt
aagatggacaactgtgaacaactgctgctagagcgtgcaacactacatggaaaactggag
gagcacgataaagctctgcacatactggtgcacaagctcagagacttcccttccgccgag
gccttctgtatatgggcatcgtcttgtcgggactccgcttatcaacagcagctgtttcac
atgctcttaggagtttatctcgacgggagccgtcctggaaaatccgagactgcagcggga
ggtggcagtggagacttggagatggcagcggttgacctcttaaatcgccacggcgaggtg
ttcgatgccgcccgtgtccttcgcatgctcccagaaggctggtcgatgcagctgctgcgg
ccctttctgggtcgagcggtccgggccagtatgcacgcctgccgcacctcccagattgct
ctggggcttgcccactctgaaaaccttcaactgctgcatgacaggttgaaagagcgtaag
aaacccatctttgtgtctgaaaagaaaggatgccacctgtgccacaacaccttcagtgag
cccgatgtggtgtgtctgcccggtggagtgcctgtccacactcactgcgtcgcccagaga
gtaagagactctcccacaaagagactgttaactaataacagtaaccatacgtga
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