Paralichthys olivaceus (Japanese flounder): 109625154
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Entry
109625154 CDS
T06037
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109625154 (mex3b)
04121 Ubiquitin system [BR:
pov04121
]
109625154 (mex3b)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109625154 (mex3b)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109625154 (mex3b)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109625154 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
Prok-RING_4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109625154
NCBI-ProteinID:
XP_019935829
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MPSSLFADNSVQGDALDEQRALQIALDQLSLLGLDNDENPLYDNNQEPRKKSVNMTECVP
VPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAA
EHFSMIRASRNKNTSLNGSGTPVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATVKRIQQ
QTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIELQDENDFHANGTDV
GFDLHGHATLWSKPNGGMTLTSVRKPFSNYRNDSSSSLGSASTDSYFGNNSSRMADYSPP
SPALSYTTTNNNGNNNNNINVNTNGNGFVYGSEVISPDCTDLTFDSSPGFDPTQAPPGLL
WSQCDSRITPSSTGGSSPTSTSAMFPTNTSTNANGIVASQRRVNGCTPQPRLSPPLHSHT
GGPTEHPLARRVRSDPGGGPLSFPGYSSTIASLPGPHLPGVPCDSSASSSSSSSSSSTSS
GTSRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICERSEPKCPVCHTGVTQAIRIF
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctcttcgccgacaacagcgtgcagggggatgcgctggacgagcagaga
gccctgcagatcgccctggaccagctctccctgctcggcttggacaacgacgagaacccg
ctgtacgacaacaaccaggagccccggaagaagagcgtcaacatgacggaatgcgtcccg
gtgcccagctccgagcatgtggccgagattgtgggcagacaaggttgcaagatcaaagcg
ctgcgagctaagaccaacacctacatcaagacccctgttcgaggtgaggagcctgttttt
gtggtgactggaaggagggaggacgtggctatggccagacgggagatcatctctgctgct
gagcacttctccatgatcagagcctccagaaacaaaaacaccagcctgaatgggagtggt
acccctgtccctggaccacctaacctgccagggcagacaaccattcaggtgcgggtgcct
taccgtgtggtgggcttggttgttggccccaagggtgccacagtcaagcgcatccagcag
cagacccacacctacattgtgacacccagtcgagataaggagccagtgtttgaggtgacg
ggaatgccagagaatgtggacagagcacgtgaagagattgaagcccacatcgctatgagg
acaggaggccttattgagctccaggatgaaaatgacttccatgctaacggcacagatgtt
ggttttgatcttcacgggcatgccaccctgtggtccaagccaaatggtgggatgaccctc
acctcagtgcgtaaacccttctccaactaccgcaacgactcgtcctcctctctgggcagt
gcctccacagactcctactttggtaataacagttcacgcatggctgactacagccctccc
agccctgcactcagttacaccaccaccaacaacaatgggaacaacaataacaacatcaat
gtcaacaccaatggcaatggtttcgtttacggaagtgaggtgatctcacctgactgcact
gatctgacttttgactcttcaccagggtttgacccgacacaagccccgccgggtctgctg
tggtcccagtgtgatagtcgcataaccccctcctcaactggaggcagttcccccacctca
acatcagccatgttccccaccaatacatccactaatgccaatgggatagtggcgagtcag
agaagggtcaatggatgtaccccacagcccagactgtcgcctccactccatagccacact
ggaggccccactgagcacccgttagcccgaagggtgcgcagtgacccgggtggtggtccg
ctcagtttccctggttactccagtaccattgcttccctgccgggccctcacctacctggg
gttccatgcgactcctccgcctcatcctcttcctcgtcttcatcctcctccacctcttca
ggcacaagccgaaaaggcagccgtgattgttcggtgtgcttcgagagtgaggtcatcgca
gcgctggtcccctgtgggcacaacctcttctgtatggaatgtgccaatcgaatctgtgag
aggagcgagcccaaatgccctgtctgccacacaggcgtcactcaggctatacgtatattt
tcataa
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