Paralichthys olivaceus (Japanese flounder): 109625385
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Entry
109625385 CDS
T06037
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04120
Ubiquitin mediated proteolysis
pov04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109625385 (syvn1)
04120 Ubiquitin mediated proteolysis
109625385 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109625385 (syvn1)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109625385 (syvn1)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109625385 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
109625385
NCBI-ProteinID:
XP_019936157
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISCVFHLRVLSLIGLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANVP
AAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPPAAAAEAPGATDAPQSSSEATQASGSSQ
PTSSTADTSTAAAAPGPTIPGFPFSFPPPPFPSAPWLPMPPPPPFVSSMPPPPPSLSRMS
EEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGSTGEASG
TNHSATTAASAASGSSTESQSQEKDSGPSLNGASVSSQPADSTSAASEMESREKIDEEVL
EEEMVEGGEPNAAELRRRRLRKLESASSSSSPPPDN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagcgttggtgactgccaccagtctggcactgactggggctgtggtggca
cacgcttacctcctcaagcaccagttctacccgactgtggtctacctcaccaaaagcagc
cccagcatggcggtgttgtacattcaggcctttgtgctggtgtttctacttggaaagttc
atgaggaaggtgttcttcggtcagctacgagctgcagaaatggagcacctcatcgagcgc
tcctggtacgctgtcactgagacctgtctggccttcactgtattcagggatgacttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttccttaagtgcttccactggctggcc
gaggatcgggtggactttatggaacgaagtccaaacatctcctgtgtttttcacttgagg
gtcttgtctctcattggactgctgggtgttctggacttcctgtttgtcaaccatgcctgt
cacagcatcattaccagaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgctgactatggtgctgaccaccttcatcaagtacgttctgcacactgttgacctacag
agtgagaatccctgggacaacaaggccgtctatatgctctatactgagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgataaaggttcacaccttc
cctctgtttgccattcgccccatgtatctggccatgagacaattcaagaaagctgtaaca
gatgctataatgtctcggagagccattcgcaacatgaacacgctataccctgatgctacc
cctgaagatctgcaggcttctgacaatgtttgtatcatctgtcgagaggaaatggtcact
ggagccaagaaactaccttgtaatcacattttccactccagctgcttgcgctcctggttc
cagcgccagcagacctgtcccacctgtcgaatggatgtgctccgagcttccaataacaat
cagactcctgccccagcccaggccccgccccctgcccccgcagcccctgccaacgtgccc
gcagccccgcctgctaatgtggctccaggcatgttaccaggcttcccacctggcatcttc
cctttctggggtcccttccctgcagtgcctcctcctcctgctgccgctgctgaagctcct
ggtgctactgatgctccacaaagcagctcagaggccacacaggcatctggttccagtcag
cccacatcatctactgctgacacctccacagcagcagctgctccaggaccaacaatccca
ggcttccccttctccttcccgcctcctcccttcccctctgcaccgtggctgcccatgccg
ccacctcctccttttgtgtcatcaatgcccccacctcctccgtctctgtcccggatgtca
gaggaggagctccgggagctggaggctgaaggccgacggggcctcgaggccagactccag
tgtctccaaaacatccacactctgctggatgctgccatgctcaacatccaccactacctc
agcaccgtcgccaccctcactccacctcgggctgaaggcagcacaggagaagccagtggg
acaaaccactctgctacaactgctgcatctgctgcatctggcagcagcacagagagtcag
agccaggagaaagactcaggacccagcttgaatggtgcttcagtctcctctcagcccgct
gattccacctctgctgcctcggaaatggaaagtagagaaaagattgatgaagaggtgctg
gaggaggagatggtggagggcggagaaccgaacgccgccgagctgaggcgccgtcgtctc
cgcaagttggagtcggcatcgtcgtcctcatcaccccctccagacaactga
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