Paralichthys olivaceus (Japanese flounder): 109625646
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Entry
109625646 CDS
T06037
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109625646 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109625646 (cstf2)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109625646 (cstf2)
U7-dependent histone pre-mRNA processing factors
109625646 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
109625646
NCBI-ProteinID:
XP_019936530
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MANVAAAAAAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
SPIIESPYGDNVQPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LSYALLQAQVVMRIVDPEIALKMLHRQTTVQPLAPSGQGGGAPPVNPPPAQPSVPVSQPQ
PVPGMHVNGAPQMMQPPNMGVVPGPIPGPVPGPGTGPVGPPGPGGIPPRGLLGDGPNDPR
GGTLLSVTGEVIDPSRGYMPSQPQHQVPPVHMAPMAGGPPPDMRGPPMDMRGPPMGEPRN
MIGDPRGPPMMEPRGPPMETRGRDPRAIDARGPAAAQRVPMAGAMQGPVAHSMGPNAPPP
ARPGSGISGGPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTPEQIAMLPPEQRQSILIL
KEQIQKTAGGAP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtcgccgccgcagctgctgcggccgcagccgccgctgccgccgccaacaga
gacccagccgtcgaccggtcgctacggtccgtgtttgtggggaacattccgtatgaagcc
accgaggagcagctgaaagacatattttctgaagtgggacttgttgtcagcttcaggtta
gtatatgacagggagacaggaaagccaaagggatatggcttctgtgaatatcaagaccag
gagacggctctcagtgccatgcggaacctgaacgggagagagttcagtggtcgggctctg
cgtgttgacaacgcagccagtgagaaaaacaaggaagagctcaaaagtttgggaacagga
tcccccattatcgagtctccttatggggataatgtccagccagaggaggccccagagtcc
atcagcagagctgtggccagtctgcctccagagcagatgtttgaactcatgaaacagatg
aagctgtgtgtgcagaacagtccccaggaggcgaggaacatgctgctgcagaaccctcag
ctgtcttacgctctgctgcaggcccaggtggtcatgcgaatcgttgaccctgagatagcc
ttgaaaatgctccaccgtcaaaccacagtccagcctctggctcccagcggacagggtgga
ggagcaccgcccgtcaatcctccgcctgcacagcccagcgtgccagtgtctcagccgcag
cctgtgcctggaatgcatgtcaatggagcccctcagatgatgcaaccccccaacatgggt
gttgtcccaggaccaattcctggaccggtaccgggacctggaacaggaccagtgggacct
ccaggaccaggtggaatcccccccagaggcctgctgggtgatggtcctaatgaccccaga
gggggaactctgctgtctgtcactggagaggtcatagaccccagccgcggctacatgcct
tctcaaccacaacaccaagtcccacctgtacacatggccccgatggcgggtggaccccct
ccagatatgagaggaccaccgatggacatgaggggcccacctatgggtgaaccccggaac
atgattggtgacccaagagggcccccgatgatggagccacggggacctccaatggaaact
agaggtcgagacccgagggcgatagatgctcgtgggccagctgctgcgcagagggttccc
atggcaggggcaatgcaaggtcccgtcgctcacagcatgggtcctaacgctcctccacct
gcaagaccgggttctggtatttctggtggtcctccctcaggtggcggcttcagtccgggt
cagagtcaggtctccacacaggaccaggagaaggccgccctgatcatgcaagtactgcag
ctgacccccgaacagatcgccatgttgcccccagagcagcggcagagcattctcatcctc
aaagagcagattcagaagactgcggggggtgcaccatga
DBGET
integrated database retrieval system
