Paralichthys olivaceus (Japanese flounder): 109625725
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Entry
109625725 CDS
T06037
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109625725 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109625725 (rbm22)
Spliceosome [BR:
pov03041
]
Complex B
Other components
Prp19-related factors
109625725 (rbm22)
Complex C
109625725 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
RRM_3
zf-CCCH
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
109625725
NCBI-ProteinID:
XP_019936688
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKASSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSTSPAV
MNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgggatccaacacctacaacagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaatccttacatccgtatgactaaggagaag
tatgggaaagaatgcaagatctgtgctcgacccttcactgtgtttcgatggtgtccaggg
acaaggatgcgttttaagaagacagaggtctgtcagacctgtagcaaaatgaagaatgtt
tgtcagacatgtctgctcgacctggaatatggtttgcctatccaggtccgagacactggg
ctttctgttaaggatgaggttcctaagtcagatgtgaacaaagagtactacactcagaac
atggagagagagatagctaattctgatggcacacggccggtgggccagctaggtaaggct
agcagctccagtgatatgttgctgaaactggcccgcacgacaccatattacaagaggaac
cggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tataggcatgagaagcccacagatcctgatgaccctctggctgaccagaacataaaagac
cgttactacggtatcaatgaccctgtagcagacaagctgctgaaaagggcctcaaccatg
ccacgacttgacccacctgacgacaagtcaatctccaccctctacattgggggtttggga
gatactgtcacagatggagacctcaagagtcacttttaccagtttggtgagattcgtacc
attaccatcgtccagaggcagcaatgtgccttcatccagtttgccacacgacagtctgct
gaaacggctgcagagaagtcctttaacaaactgatcattaatggacgaaggctcactgtc
aaatggggaaggtctcaggcagcaagaggaaaggagggtatcaaagatggtgtgagtgag
atgggcaccagacttgatcctgtacctggactgcctggagctcttcctccaccgccagct
ttggatgaagaggcccctgcaaattacttcaacctggacccgagcacttctcctgctgtc
atgaacatagctctgcccccaccgccaggaataaacccacctcccccaggtttcgggcct
ccaatgtttcaccccatgggtcacatggctccacctatgccccctccaatgagcatgaga
cctcccggtcaaattcactacccctcccaagatcctcagcgcatgggtgcccatgcagca
catggctcacgccatggagattag
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