Paralichthys olivaceus (Japanese flounder): 109625775
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Entry
109625775 CDS
T06037
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04136
Autophagy - other
pov04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109625775 (atg4b)
04136 Autophagy - other
109625775 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pov01002
]
109625775 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109625775 (atg4b)
03029 Mitochondrial biogenesis [BR:
pov03029
]
109625775 (atg4b)
Peptidases and inhibitors [BR:
pov01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
109625775 (atg4b)
Membrane trafficking [BR:
pov04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109625775 (atg4b)
Mitochondrial biogenesis [BR:
pov03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109625775 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Dysbindin
Motif
Other DBs
NCBI-GeneID:
109625775
NCBI-ProteinID:
XP_019936788
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALLCRHLGRNWRWTRDEKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
RLCMPWLDAAACGEAEAVGDLNGCLEGACALAEEETALWRPLVLLIPLRLGLSDINEAYI
ETLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDETYH
CQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCRRGGLPMFELVDSQPCHMV
SVDALNLTPDAPFTDFSDSDRLERFFDSEDEEFEILSL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagcaaccttgacatatgacacacttcgctttggagagtttgaagattttcct
gagacctcagagcctgtgtggatcttgggcaaagaatacaatgcactcacagagaaagat
gagattttatcagatgtcacttcacgactgtggttcacatacagaaaaaacttcccgccg
attggtgggacaggaccgacgtcagatacaggatgggggtgtatgttacgatgcggccag
atgatcctcggcgaggccttgttatgcagacatttaggcagaaactggagatggaccaga
gatgagaaacaaagagaagagtacatcagtattctcaatgccttcattgacaaaaaggac
agctattattccatccatcaaattgcccaaatgggggttggagaggggaagccaataggc
cagtggtatggaccaaacacagtcgcccaggttctaaagaaactggcagtgtttgataca
tggagcagattagttgtacacgtggcgatggacaacactgtggtcatcgaggagatcaag
cggctctgtatgccctggttggatgcggcggcctgtggagaggccgaggcagtgggggat
ctgaatggctgcctcgagggtgcgtgtgcgctggctgaggaggaaacggctctgtggaga
cccctggtcctgctcatccccctcaggctgggcctgagtgatataaacgaggcctatatt
gaaacccttaagcaatgcttcatgctgcctcagtccctgggtgttattggggggaaaccc
aatagtgcccattacttcattggttatgtcggagaagaactcatctacttagacccacac
accacacagcctgcagtggagccgtgtgaagacagccaggtccccgatgagacgtaccat
tgtcagcacccaccctgccgcatgcacatctgtgaactggacccatccattgcagcgggt
ttcttctgcagaacagaggacgagtttgatgactggtgtatgcgcataagaaggctgtcc
tgcagaagagggggcctgcccatgtttgaactcgtagacagtcagccctgtcacatggtc
agtgtggatgctcttaacctcactcctgacgctcccttcacagatttctcagactcggac
aggttggagcggttctttgactcagaagacgaagagtttgagatcctttccctgtga
DBGET
integrated database retrieval system
