KEGG   Paralichthys olivaceus (Japanese flounder): 109625946
Entry
109625946         CDS       T06037                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082  ATP-dependent chromatin remodeling
pov03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109625946
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109625946
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pov01009]
    109625946
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pov03021]
    109625946
   03036 Chromosome and associated proteins [BR:pov03036]
    109625946
Protein phosphatases and associated proteins [BR:pov01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109625946
Transcription machinery [BR:pov03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     109625946
    SWI/SNF complex
     109625946
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109625946
   PBAF complex
    109625946
   SWI/SNF complex
    109625946
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 109625946
NCBI-ProteinID: XP_019937120
LinkDB
Position
Unknown
AA seq 312 aa
MQLALTKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRIGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIEG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSVLEEQ
GDQRIIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFR
NT seq 939 nt   +upstreamnt  +downstreamnt
atgcaattggctttaacgaaaacatttggtcagaagccggttaaatttcagttggaacaa
gacggggacttttacatggttgggtcggaggttggaaactatttgcgtatgttcagaggc
tctttgtataaaagatacccatctttatggaggaggctggcctcagtggaggaaaggaaa
aaaatagtagcatcatcacatgccactagtgttactctactgaaggcatctgaatgtgaa
gagatctttgagggaaatgacgagaaatacaaggcagtgtccatcagcacagagccccca
gcttacctcagggagcagaaagcaaaaaggagcagtcagtgggtccccacattgcccaac
agctctcaccatctagatgctgtgccttgctccaccaccatcaaccgaaacagaattgga
cgtgacaagaagaggacatttcccctgtgttttgatgaccatgaccctgcagttatccat
gagaatgcagcccaggtagaggctctggttccaattcgtctggatatggagatagaagga
cagaaactacgagatgccttcacatggaacatgaatgagaaactgatgaccccagagatg
tttgcagagattttgtgtgatgacctagacctgaatcctctggcctttgtccctgccatt
gcctcagccattcgtcagcagattgagtcctacccaactgacagtgtactagaggagcag
ggagaccagagaatcatcatcaagctgaacatccatgttgggaacatctctttagtggac
cagtttgagtgggacatgtcagagagggagaattccccagagtcgtttgcactgaaactg
tgctctgagctgggtttgggcggagagtttgtcaccacaatcgcctacagcattcgaggt
caactcagttggcaccagaggacctatgccttcaggtaa

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