Paralichthys olivaceus (Japanese flounder): 109625958
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Entry
109625958 CDS
T06037
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pov03009
]
109625958
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109625958
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
Pre-60S particles
Helicases
109625958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
109625958
NCBI-ProteinID:
XP_019937139
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MIQAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPVIQRILASKQSVR
EQDVRALILVPTKELGRQVQTMMRQLTAFCSRDVRVADISGKADLSSQRPILMEKPDVVV
GTPSRVLAHLSAQNLALHSSLEMLVVDEADLLFSFGFEADLKNLLCHLPKIYQSFLMSAT
LTEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYSIKCEEEDKFLLIYTLLKLRLVQGK
TLVFVGAVDRCYRLKLFLEQFSIPACVLNSELPVQSRCHIITQFNQGFYDYIIATDEQSL
ADPSAAPQTSAGKGKKKKTTERKGKGKDKEYGVSRGVDFQNVANVINFDFPTTVESYIHR
VGRTARADNPGSALSFISHAELALLSEVEEALTGDNADSVLKPYEFKMEEIEGFRYRCRD
AMRSVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKDLHPAVVKPHLKNI
PEYLIPETLRGVVNPLSSKRRRKRKSKPDGVVKTSFKKNSKGTNPLKTFRYSGGRGRKGK
AGQS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatccaggcggttgcagatctgggttggtcccagccgaccctgattcaagagaaggcc
attcctctggctctggaggggaaagaccttctggctcgagcccggacaggatctggaaag
acggctgcgtacgccattcctgtcatacaacgcatcctggcgtccaaacagagtgttcgt
gagcaggacgtgagggctctgatcctggttccaaccaaagagctgggtcggcaggttcag
accatgatgagacagctgacggcgttctgctcgagggacgtgcgggtggctgacatctct
gggaaggctgatctgtcatcgcagagacctatcttaatggaaaagcctgatgtggtagtg
gggacgccgtcccgcgtgctggcccacctcagcgcccagaatctggccctgcattcatcg
cttgagatgctggtggtggacgaggccgacttgctcttctcttttgggttcgaggcagac
ctgaagaacctgctgtgtcatttgccgaagatctaccagtcgttcctgatgtctgctact
ctcaccgaggacgttcaggccttgaaggagctgctgctacacaaccctgtgatcttgaag
cttcagggctctcagctcccggacagcagccagctgcagcagtacagcatcaaatgtgag
gaggaggacaagttcctgctcatctacacgctgctgaagctgcgactggttcagggaaag
acgctggtgtttgtgggagcagtggacagatgctacagactgaagctgttcctggaacag
ttcagtattcctgcctgtgtgctcaactctgagctgcccgttcagtccaggtgtcacatc
atcacccagtttaaccagggattttatgactacatcatcgccacagatgaacagagtttg
gccgatccctctgcagctccccagacgagtgcgggcaaagggaaaaagaaaaagaccaca
gagagaaaaggaaagggcaaggacaaggagtatggagtctccagaggtgtggatttccaa
aatgttgccaatgtcatcaactttgatttcccaacgactgtagagtcctacatccatcga
gttggcagaacggcgagagcagacaacccaggcagcgctctgtcgttcatctcacacgct
gagctcgccttgctgtcagaggtggaggaggctctgacaggagataatgctgattctgtt
ctgaaaccttacgagtttaagatggaagagattgaaggcttcaggtacaggtgcagggac
gccatgcgttcagtgacgaaacaggcggtgaaggaggccaggctgaaagagatcaaacag
gagctgctcaattcagaaaaactcaagacatatttcgaggataaccccagagatctgcag
ctgctcagacatgacaaagacctccatcctgctgtcgtcaaaccgcacctgaagaacata
cctgagtacctcattcccgagacactgaggggtgtggtgaatccgctgtccagcaagagg
aggaggaagaggaaatctaaacctgatggagtcgtcaagaccagtttcaagaagaacagc
aaggggacgaacccactgaagactttcagatacagtggagggagaggcaggaaaggcaaa
gcgggccagtcgtag
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