Paralichthys olivaceus (Japanese flounder): 109626214
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Entry
109626214 CDS
T06037
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109626214 (rc3h2)
04121 Ubiquitin system [BR:
pov04121
]
109626214 (rc3h2)
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109626214 (rc3h2)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109626214 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf_CCCH_4
zf-CCCH_UNK
Prok-RING_4
zf-C3HC4_2
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
109626214
NCBI-ProteinID:
XP_019937489
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQIPDMQPVSLSGAAEVEHYEVCRVCVEELALYLKPISGAKGVAT
LSPSLLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRLHLELLADI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSNSVGRAFPLAPGVMGKTFTMEGSIHEDVSA
GVVEGLKGTGDNATTLTDGVPVLTHPQLITRGADMIEEMKRVVPNGTSGANGCNGLPGTN
RTMSGAMEQKPISPPRTPVSHSASSPLTTVVRGDGGAPMPKHGQFMLRAPHPSQATELYY
QEPHSAYDTGHYQQTSGSYYPSTLHHPHKPCMARFLRSSNVPESPLPPSIGPPPTSYHSD
PQTPHPPSSSSSGYPPHPPRDRMGPAFHPHPGQPQYGPLAPAHGVYAPLYDSRRVWRPQL
YHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGADHRTGLHRDYSRVPLGYEDL
FRRKQEQWAHHHHHHNTNRPSQSSPIFTIDFGNEHLENSGGQCVGCRFRGEESLAHYSPW
SCGPIGPCLSPFEPETLTHASAHSCSEHQELDANGGRGGGGSGSSVGKRWLHSLDHYRRL
KDEDPIIPFSEGPIISKWGAISRASRTGYHTTDPVQATACQRSSSTTPINFKDYNPHLDH
SDYRWGSRGSDSSSHSSFLESEQLCASELHGRRTSISSGERIVSCNLQAHQAVYSQERER
AESEPDPGRDIELELCALDMEDSDPQESKSQESLDLITPTSQDASHLLPPPCSSPLLSSP
VKEHPRTEGTLTEKMDAHLLKKMAFRKSLSPGGLVSRGLGVGKLVLRTGPSRLGDTSTAS
TEMLLNGS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcagcccagtggacagagttcctgtcctgtcccatctgctacaatgag
tttgacagcagcggccaccagcccatcagcctgggctgctcccacacagtgtgcaagacc
tgcctgcacaaactgcaccgcaaggcctgccccttcgaccagacacccatcagcaccgac
atcgacctgctgccggtcaactgtgccctgctgcagctggtcggagctcagatccctgat
atgcagccggtgagcctgagtggtgcagcagaggtggagcactatgaggtctgcagggtg
tgtgtagaagagctggctctctacctaaaacctatcagcggagcaaaaggtgttgcaaca
ctgagtccgagcctgctcagtcggcccatgcagaggaagctggtgaccctggtgaactgc
cagctagtggaggaggagggccgtgtgcgggcggtgcgggcgggccggtcgctgggggaa
cggactgtgaccgagctcatcctgcagcaccagaacccccagcagctctctgccaacctg
tgggcggcggtgcgggcgcgaggatgtcagttccttggacctgctatgcaagaagatgca
ctgaagctggttttactggctctggaggacggctcggctctgtccaggaaggtgctggtt
ttgtttgttgtccagaagctcgaggctcggttcccccaggcctccaaaaccagcataggc
cacgtggtgcagctgctctacagggcctcctgcttcaaggtgactaagcgtgatgaggac
tcttcactaatgcagctgaaggaagagtttcgcacatacgaggctctcaggagggaacac
gatgcccagattgtccacatcgccatggaggcgggcctgcggatctcacctgagcagtgg
tcgtctctactgtacggagacctggtccacaagtcacatatgcagtccatcattgacaag
ctccagtctccagagtcgtttgcaaagagcgtccaggagctgacaatcgttctgcagaga
acaggagacccggccaacctcacgagccttagactgcacctcgagctactggctgacata
gaccacaacccagacgccccagcgccatcatgggaggagctggaaagcgtgatgctggct
gtgaagttggtggttcacggactggtggagttcatacagaacttcagcaagaagagccac
gacactccgcagcctcaagccaacagcaagtacaagaccagcatgtgccgggacctccgt
caacagggtggctgtccccggggaaccaactgtacattcgcgcacacacaggacgaactg
gagaaatttagattgaggaacaagaagagcaacagcgtgggccgcgcatttccgttggcg
cccggggttatgggtaaaaccttcaccatggagggcagcatccacgaagacgtgtccgcg
ggagtggtagaggggctcaaaggcacaggggacaatgcaactaccctgacagacggtgtt
cctgtcctgactcacccacagcttatcaccagaggggctgacatgattgaggaaatgaag
agggtggtgccaaatggaaccagtggggcgaacgggtgcaacgggctacctggtaccaac
agaaccatgtcgggtgcaatggaacagaagcccatctctcctcccaggactccagtcagc
cactcagcatcatctcccttgaccacagtcgtgcggggtgacggtggtgctccgatgccc
aaacacggtcagttcatgctgcgtgcgccacatccttcacaggcgacagagctgtactat
caggagccccactctgcttatgacacgggccattatcaacaaacctcaggttcttattac
ccatctactctacatcatcctcacaaaccctgcatggctcgcttcctcaggtcgtccaat
gtcccagaatcccctctgcctccctccattggccctccaccgacttcgtaccacagtgac
cctcaaacgcctcacccaccctcctcctcttcctcggggtacccaccacacccacccaga
gatcggatgggccccgccttccatccccacccggggcagcctcagtatgggcctctggct
cctgctcatggggtttacgctccgctctacgacagcaggagagtatggaggcctcagctg
taccacagagaggacgccaggagtaactcgctgcctccagaggtgctgcattcctccgtc
taccagcctccactcagggagagattcaactctctagacagcaactactgctctggagcg
gaccaccgcacagggcttcacagggattacagtcgtgttcctctgggctacgaggatctg
ttcaggaggaagcaggaacagtgggcgcatcatcaccaccatcacaacaccaacagaccc
tcccagtcctcccccatcttcaccatcgactttggaaatgagcatttggagaacagcgga
ggtcagtgtgtcggatgcaggttcagaggagaggaaagcttagcgcactactccccgtgg
tcctgtggccccatcggcccctgcctcagcccctttgagcctgaaacactgacgcacgcc
tcagctcactcctgctcggagcaccaggagttggacgctaacggaggcagaggcggcgga
ggtagcggcagcagtgtcgggaagcggtggctgcattcgttggatcactaccggcgctta
aaagacgaggatcccatcattcccttcagcgaggggcccatcatctccaagtggggtgcc
atatccagggcgtcacgcacaggctaccacaccaccgacccggttcaagccacggcctgc
cagagaagctccagcaccacacccatcaactttaaagattataacccacacttggatcac
agtgactacagatggggctccagaggatcagactcttccagccactccagtttcctcgaa
agtgagcagctttgtgcatcagagcttcacggccggcgaacctcgataagcagtggagag
agaatcgtgagctgtaatctacaagcgcatcaggccgtctacagccaggaacgggagcga
gccgagagcgagccggacccgggccgagacattgagctggaactgtgcgctctggacatg
gaggattcagacccccaggagagcaagtctcaggagtctttagacctgattactccaaca
tctcaagatgcttcccacctgctcccgcctccctgctcctctcccctcctctcatcccct
gtgaaggaacacccccgaacagagggtactttgacagagaagatggacgctcacctgctg
aaaaagatggccttcagaaagtctctgtctccaggcgggttggtctcaaggggtcttggc
gtcggcaagctcgtgctgcgaaccggaccctctcgactgggagacacttccaccgcttcc
acagagatgcttctgaatggaagctaa
DBGET
integrated database retrieval system
