Paralichthys olivaceus (Japanese flounder): 109626228
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Entry
109626228 CDS
T06037
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109626228 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109626228 (nup214)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109626228 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Nup214_FG
Beta-prop_EML_2
WD40
Nucleoporin_FG
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109626228
NCBI-ProteinID:
XP_019937516
LinkDB
All DBs
Position
Unknown
AA seq
2008 aa
AA seq
DB search
MSDDTDSPHEREMKDFQFRQMKKARVFDAPGDLPKERSNLLTISNRYGLSYVGLNRTFKV
YLTHDILAADKVDGNSNEIVSGIPVLAEVTLELAVHHLALSCDELTLSVCGMSEAGGLSL
TFYDVRTFINKARQQKLPFASLQAAAPSGTVVLDLKWNPAQASTLAACLSDGSMMILDVT
DSVKVQAELPASSGITCICWSPKGKQVAAGKMNATVSQYTPALEEKKVIPCPHFYTSSPD
DAVKALDVLWLKTFVFAVVYAAADGSLETPPELVLISLPKKDEKVETKYLNFSDTVYGSC
TERLHHYFLSHVEDWDLVFAASAASIEVSVIARQDDKIWELWILEDASRAELPVTETNED
TLPLGFAIDYTSQQEIYISDEKTLPPAPTMLMLSTEGLLCPFALLNLNPGVKQLVSRPSL
LPLEGERLPNLGSLAAQLPKAAAAAIPSAPAVFQNLGLTSAAAPTPAAPIASSSAARFGF
VTTAPVSSSSSAFTFSVPTTNSTSAPSAFSLGGSMSFGSGSSGFSFASKPPSDTPSAPSA
FSISTPSIKPAAVAAPAPAPAPALHSIAAASPPTVKMNLNERFSAVETPAQAPQSFSFTS
PIPKPVVSNSSSLTAPPLAVVKPPAVLTPVRPVQTSTPPTVVQKPTPAAQSRIQAPQAPV
APVKAVEKQPQQKKESDHIMAGILEEIAHFQKELDDLKARSARADFKVGTNDEMKELRKE
SEDLHIFTLEIKETTESLNGDIGTLKTTLLEGFAGAEEAITQSELSKDKNNRQLLYKKPL
DPRSEERLKEIRRLYQYVTFAVEDVNDVLNVEWEKHLEKKKKLKHMAVPGREGLFTTLAN
NLYIIEQQKFRLEQLVKDLSSLMLYNKTTTPTANQNTATATTAGLESELESLRDALLKAR
LDPTPLKTKTRSPVKISPVKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDD
VSSTSTLSQSLDPHPAHLELEEEEEELQPEPLLVIPQALATPRHPTVVRTPSIQPGFGAI
QSTPLTKIHQVQAMGFGLSPIPSPIPTNKINLSGPDSTALATKTVKHGAPPAERAVPVTI
PAQQAAATAALRRQMANQKMAVVGASLTESTLKIVPQVVNVQELKEKGSPVPVSTIISSP
DPVFAVSSTQAKRNPTQGIQTMSAECTTTSQTGFVFGQPSKPDVSVAPASSVEQNTSKGF
SFSSGSASFSFASVAQGPGISQAKDVSKFSFGGNGKIGFGQAGEEAFSFIPKSTSPALHT
ASPTLPPNPPGEAAKPTSTTTALRVEPQPPKTAGGETLGSFSGLRVGQGEEAKDASTKPT
PASFTFGDSGLGMGKGAAQFSFGTGAQKSAEDSTGSDLAKGAASGSLFKPPESTTKPAFS
VPQLGSATTALPTSFSSLLAESSDSTEEPKVSQQPSEPTPPPEKEPASEPTVESASAPEV
LDPAEEAASIETTPAPAAPTPPPPLATTAPAPTPEPPTSIAAPAEAAPPPPYSAPTVEAP
TDISTTTTAPVSTSAAATFAAVPVSQVAPAAFQVPSSDKPGSIFTQPAPATTDSNTIGIT
TVINTFANAATTPTPTAVSAATTTAATVFGQPVAPPASSAPSAPAITGFGSSGFGASAGA
NFGKTVFGQVSGFGQPASNTGTASGFSFGQPAFGASSNSATTGGGGGGGSLFGAATASNA
SSFPFGTGTANTASSTGSGLFGQSTAPAFGQSSGFGQGSVFGSNTTTSSSAGFSFGQPSG
FGCSSSTSVFGQQPNTGSVFGQQQQQQQQSSSGSVFGSGSANTAGSSAGGGFFSGLGGKP
TEEAANKNPFGNPPSTGGFGQSAQTGSNTLFGNSGAKAFGFEQTSFGEQKPSGTFSTGGG
SVASQGFGSFSSPTKPGGFGSAPVFGSPPSFGSSPAFGGAASFGSNPSFNNNMGSSAGKV
FGEGTAASNMGGFGFASPPPAPSFGALANQNTPSFGNLAQQGSGFGNQPSGFSGFGQQPQ
TGGFSGNTFGSSNQSGEPNMPGEEISLK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacacggactctcctcacgagagggaaatgaaggattttcagttccgtcag
atgaagaaagcaagagtctttgatgctcctggggatttgcctaaagaaagatccaatctg
ctcaccatctcaaacagatatggtttaagttatgttgggctcaacagaacattcaaagtt
tacctgacacatgatatcctggctgctgataaagttgatggcaactccaatgaaatagtc
agtggaataccagtgttggccgaggtgacgttggaactggctgtgcatcacttagctctc
agctgtgatgaacttacattgtcagtatgtggcatgtctgaggcggggggtttatccctc
actttctacgatgtccgcaccttcattaacaaggcaagacaacagaagttaccttttgca
tcgctgcaggcagccgctccctctggcactgtggtgctggacctcaagtggaatcctgct
caggcgtccactttggctgcctgtctgtctgatggcagcatgatgattttggatgttaca
gacagtgtcaaagtgcaggccgagctacccgcatccagtggtatcacatgcatttgctgg
agtccaaaaggaaaacaagtcgctgcaggaaaaatgaatgccacagtcagtcagtacaca
ccagcattagaggaaaagaaagtgatcccatgtccacacttctacacttcttcccctgat
gatgctgtcaaagctctggatgtcctgtggctgaaaacctttgtgtttgcagtggtatat
gctgctgcagatggatcccttgagacccctcccgagcttgtgttgatctccctccctaaa
aaggatgagaaggtggagacgaagtatctgaactttagtgacacggtgtatggcagctgc
actgaacggctacaccactacttcctgagccatgtggaggactgggaccttgtgtttgca
gcatcagcagcttccattgaggtcagcgtcatagccagacaagacgacaagatatgggaa
ctttggattctggaagatgcaagtcgggctgagcttccagtgactgagacaaatgaagac
actctacctctcggcttcgccatagactacaccagccagcaggagatctacatctctgat
gagaagaccttacctccagcgcccacgatgctaatgctatccacggaggggttactctgc
ccgtttgctctgctcaacctcaatcctggtgtgaagcagctggtctcacgccccagcctt
ctccctctggagggggagagactgcccaatctaggttctttggcagcccaactaccaaaa
gctgctgccgccgccattccatctgccccagcggtgttccaaaaccttggtctaacatca
gcagctgctcccactcctgccgctcccattgcctcttcctctgctgctcggttcggcttt
gtaacaacagctcctgtgtcatcgtcctcatcggccttcactttctctgtcccaactacc
aactccacctcagccccttcagctttctccctggggggatccatgtcctttggctcagga
tcctcaggcttttcttttgcttccaaacctccctctgatactccctcagcaccgtctgcc
ttttccatcagcacgccttccatcaaaccggcagcggtagcagccccggccccagctcca
gctccagcccttcacagcattgctgctgcctccccacccacagtgaaaatgaatctgaat
gagaggttttcagcagtggagaccccagcacaagccccacagtctttctccttcacttct
ccaatacccaaaccagttgtctccaattccagtagtttgaccgcccctccacttgcagtc
gttaagccaccagctgtacttaccccagtgcgtccagttcaaaccagcacgccgccaaca
gttgtccagaaaccgactcctgctgcccagagccgaatccaagctccacaggcccctgtg
gcacctgtgaaggccgtggagaagcagccacagcaaaagaaagagtcggatcacatcatg
gctggtatattggaagagattgcacacttccagaaggagctggatgaccttaaggcaaga
agtgcaagagctgatttcaaggttggcaccaatgacgagatgaaggagttgaggaaggag
tcagaggacctacatattttcacactggagatcaaggaaactacagagtctctcaatggg
gatattgggactctgaagacaaccttattggagggctttgctggggcagaagaagccatc
acccagagtgagctgagcaaagacaaaaataacagacagctgctttacaaaaaacctctc
gacccacgcagtgaggaacgactcaaggagattcgcagactgtaccagtacgttacattt
gctgtggaagacgtcaacgatgtgttgaatgtggaatgggagaaacatctggagaagaag
aaaaagctgaaacacatggccgtgccagggcgtgagggtcttttcacaacactggccaac
aacctgtacatcatcgagcagcaaaagttcagattggagcagttggttaaagacctcagt
tcactgatgctctacaacaagacaactacaccaactgcaaaccaaaatactgcgacagca
acaactgctggtttggaaagtgagcttgagagtttaagggatgctctcctgaaagccaga
ctggaccctacccctctcaaaaccaaaaccagatctccagtcaagatctcaccagtgaaa
cagtcccagctacgcaacttcctgtcaaaggggcagatgcctcctgtccgctcaactgca
ccagccaacctgtctcgatccgccttcctgtcccctaaatactacgaggacttggatgat
gtgagctctacctccaccctgtcccagtccctggacccccaccctgctcacttggagctg
gaggaagaggaggaggaactacagccagagcccctccttgtcataccccaagcacttgcc
acccctcgtcaccccactgtcgtgaggaccccctctatccagcctggctttggagcaatc
cagtctacacctttaaccaaaattcatcaagtacaggctatgggctttggactcagccct
atacccagccctattccaaccaataagatcaacctcagcgggcctgatagcactgctctt
gccacaaagacggtcaaacacggagccccaccagctgagagggccgtacctgttaccatc
cctgcccagcaggccgcagccaccgctgctctacgcaggcagatggccaatcagaagatg
gctgttgtcggcgcttctttgacagagtccactctgaagatagttcctcaggtcgtcaat
gttcaggagctcaaggagaaagggtctcctgttccagtttccactatcatcagctcgcca
gatccagtctttgcagtttcttctacccaggctaaacgaaatcctactcaaggtatccag
acgatgtccgctgaatgtacaaccacctcacagacagggtttgtgtttggtcaaccatcc
aaacctgatgtttccgtggctcctgcaagttcagtggagcaaaacaccagcaaaggtttc
tccttttcttcagggtccgcaagcttcagttttgcttcagttgcacagggacctggaata
tcacaagcaaaggatgtgagtaaattttcctttggtggaaatggcaaaattggattcggg
caggctggagaggaggcattctcattcatcccaaagtccacctcccctgctctacacaca
gcgtcccccaccctgcctccgaacccaccaggagaagcagccaaacccacctctaccaca
acagccctcagggtagagccacagccacctaagacagctggaggtgagacactgggcagt
ttctccggactacgtgtgggccaaggagaagaagccaaagatgcctctaccaaacctact
cctgcctcgtttaccttcggggacagtggacttgggatgggcaagggagcagcacagttt
agctttggtacaggtgctcaaaagtctgcagaagattccacgggatcagacttggcgaag
ggagcagcgtcaggcagtttgtttaagcctcctgaatcaacaactaagccagccttctct
gttccccagttaggctcagctaccacagctttacctacgtctttcagtagtctccttgca
gaatcttcagactccacagaggaaccaaaagtttcccaacaaccttcagaacccacccct
ccccctgaaaaagaaccagcttctgaacccactgtggagagcgccagtgccccagaagta
ctcgaccctgcagaggaggctgccagcatagaaaccacaccagcaccagcagcaccaaca
cccccacctcctttggccacaactgccccagccccaaccccagaacctccgacctccatt
gccgcaccagctgaagccgcccctccaccaccatacagtgctcccacagtagaagcaccc
acagacatttccaccaccaccactgctcctgtgtccacttctgcagctgccaccttcgct
gcagttcctgtctcccaggttgcaccagcagcatttcaggttccctcctctgataagcca
ggctccatttttactcagcctgctcctgcaacaacagacagcaacaccattggaatcaca
acagtaatcaacacatttgccaatgcagcaaccactcccacccctacagctgttagcgct
gcaacaactactgctgccactgtatttgggcaacctgttgcacctccagcttcctcagcc
ccctcggctccagcaatcacaggatttggttcatctgggtttggtgcatcagctggagct
aattttggcaaaactgtatttggccaggtgagtggctttggccagcctgccagtaacact
ggaacagctagtggattttctttcggccagccagcctttggagcaagctctaacagtgca
accactggaggaggaggaggaggaggaagtctttttggtgctgctactgccagcaatgca
agttccttcccgtttggcacaggcactgccaacacagccagcagcaccggctctgggctg
tttggacagagcacagccccagcgtttggccagagctctggatttgggcaaggctctgtg
tttggtagtaacaccaccacgtcatcttccgcaggattcagctttggacagccctcaggt
ttcggttgctcctcttccacttctgtgtttggccaacaaccaaacactggcagtgtgttt
ggacagcagcagcagcagcagcagcaatcatctagtgggagtgtgtttgggtcaggttca
gccaacactgcaggctcatcagctggtggaggattcttcagtggcctgggaggcaaaccc
accgaggaggctgccaacaagaacccatttggcaaccctccctccaccggaggatttggc
cagtctgctcagacaggttccaacactctgtttgggaatagtggtgccaaggcctttggt
tttgaacagacctcctttggtgagcagaaacccagtggcaccttcagcactggaggaggg
agtgtcgcatcccagggttttggctccttctcttctccgacaaaaccaggtggattcggc
agcgctccagtgtttggaagtcccccttccttcggtagttctccagcatttggaggtgcg
gcgtcattcggctccaacccttcattcaacaacaacatgggttcctccgctggtaaagtg
tttggcgagggaactgcggcctccaacatgggaggatttgggtttgcgtcacctccccct
gccccatcctttggcgctctagctaatcagaacactccgtcattcgggaacttggcccag
cagggctctgggtttggaaatcagcccagcggcttctcagggtttggacagcagccacag
acaggaggattctctggaaacacctttggctcttcaaaccagtcgggtgaacccaacatg
cctggtgaggaaatctccctgaagtga
DBGET
integrated database retrieval system
