Paralichthys olivaceus (Japanese flounder): 109626386
Help
Entry
109626386 CDS
T06037
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109626386
04518 Integrin signaling
109626386
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109626386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pov00536
]
109626386
Glycosaminoglycan binding proteins [BR:
pov00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109626386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Fn3_Dep-1_2nd
Pur_ac_phosph_N
DUF7949
EGF
hEGF
NDNF_C
Motif
Other DBs
NCBI-GeneID:
109626386
NCBI-ProteinID:
XP_019937839
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MGRRSFLGCFLLTVLLSLSTAGLVKKIIRHRRQTLVAPNEHNVTLPSADHPVVFNHVYNI
NVPASSLCSVDLDAPQSTQLLPKDSPASSGHHITEHTVDGENQIVFTHRINIPRQACGCA
DDLPGLKELMSRLEMLEGEVSALRDQCTSDRPCCSAQVTGEIGTKPYCNGHGNYSTDTCG
CVCEPGWKGPNCTEAECPGNCQDRGHCVDGKCECFKGFSGEDCTLELCPVDCGAHGMCVE
GICICSDGFFGDDCSQTECLNNCRGRGRCDKGNCVCDIPWTGFDCSELMCPKGCYDHGRC
VNGTCYCDEGYTGEDCREPTCPNNCQGNGFCVDGRCVCTAGYSGEDCSKLTCLNDCNGRG
TCFNGMCICDIGYQGEDCSQLACLNNCNNRGQCINGQCACDVGFQGDDCSELSCPSDCLH
RGRCVNGQCVCDEGFAGEDCSIMTCPSNCYGRGECIDGRCACHAGFTGEDCGALSCPNNC
KNRGRCIDGQCVCDEGFTGEDCSEKACPNDCLARGYCVDGKCMCQEGYSGNDCSVLACPE
NCNNRGRCINGKCTCESGYEGESCAELSCLNNCQDKGRCVSGQCVCDEGYIGEDCSEVSP
PKDLNVGEVTANTVDLSWNNDMLVTEYLVTYVPTSPGGLLQENTVSGDKTSTTVKELEPG
IEYLISVYAVLSNKRSVPVSARVATALPQPEGLKFKSVRETSVEVIWDQLDISFDGWEIY
FRNTKEENGKVVSTLPSSQNQFLQSGLGPGQEYEVSINIIKNNTRGPQTTKTVTTKTDGP
QQVEVKDVTDSSALVSWTQPVVPMDRVTMFYRPTSDPSDESNAEIFPPDKQYSIDGLRPD
TEYTVMVSSSSGNISSDPVITTFTTALDAPKHLRPVSQTDSSITLEWTNSQADVGIYRVK
YTPISGATHGEEVFLRGPGDTTKATITGLNPGAEYGIGVTAMKIERESLPATTNAETDID
PPRDFEEVESTETSLTLKWEKPTAKFGGYRLVYVSRDGQVEEVEIPATATSHVVTSLTPG
MGYTLTLTAERGHKRSTPVILSTATASFTFYLADSDDAELTTPTASEDNVISFVNLEPSE
SQFSGMESEDELGTLTVSGITSDGFDLSWRLKAHSLYDSFAVEYKDPQRLWDVREVQLPG
NATGSRFEGLAPLTEYQIKLYGITSSQRSALLEAVAVTAPEPTSPGVLTLSIKDATTTTQ
SALDNDTIQTTDLLHPVNTEPPSISDTVVMSSGAESSNMDVLGDLKVTNATSTSVSLAWS
APNEAFDSFMVELSSPSGVTQAHVTTLPGNVRKAEIEGLTPSTHYDVTLQGLVDGNRSLP
LKVFATTEELKPMVVNLTISDITWDSFTASWTPMVGDFDSFVIEVTNLENFAESQNLSLS
GDAFSLGIPGLNPNTSYMVGLYGMYDGSFLEPVYSEATTEAEPEVEHLFVSDITADSFRL
SWAADEDMFDRFVIKIRDSKRLAHPKEYSVRGDERTMVLTGLMSGTEYEIELYGITLDQR
SQPITGVAQTGLSTPSGIHFSEVTDSSAVVHWSMSSSPMDTYRIVYVPFEGGSPMTVTVD
GSVFEVALPNMIPGKTYQVTVSAVKGLEESDPSTDTVTTALDRPQGLIAVNVTDTSALLL
WQPSVATVDGYVITYRADSVSPVVEHVSGNTVEFEMGSLVPGTHYTVGVHAMKEAQKSGS
AVTEFITDVDPPRDLTAINIQTDSATLTWKPPQAAVTGYTLTFSSADGVIREVVLSPTAS
SYSMAQLTGSTEYSVKLQAIAGPQRSRHVATVFTTIGQLFRRPRDCAQIYLNGETTSGLY
TIHVGGEEGQPIQVYCDMTTDGGGWTVALRRQNGKLEFYRNWKNYTAGFGNMNDEFWLGL
SNLYKMTSSGHYELRVDLRDKGETAYAQYDKFTLAEPRTRYKIYIGAYSGTAGDSMTYHQ
GRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDNSHSKGINWFHWKGHEHS
IEFAEMKIRPANFRNFESRKKRS
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaagaagcttcctgggctgcttcctcctgactgttctgctcagcttatcaact
gctgggcttgttaagaaaatcatacgtcatcgaagacagactctggtagcccctaatgaa
cataacgtcaccctccccagtgcagaccatcctgtggttttcaaccacgtctataacatc
aatgttcctgccagttcgctgtgctcagtagacctggacgccccacagagcacacagctt
cttcccaaagattcgccagcttcgtcaggccatcacatcactgagcacaccgtcgacggg
gagaaccagatcgtgttcacccaccgcatcaatatacctcgtcaggcctgcggctgcgct
gacgacctgcccggcctgaaagagctcatgagccgcctggagatgcttgagggagaagtt
tcagctttgagagatcagtgcaccagcgacaggccctgctgcagtgcacaggtcacaggt
gaaataggaacaaaaccttactgcaacggtcatggaaactacagcactgacacctgtggc
tgtgtgtgtgagcctggctggaagggacccaactgcactgaggccgagtgtcccggtaac
tgccaggaccggggccactgtgtggacggaaagtgtgagtgctttaaaggcttctctgga
gaggactgcacgctcgagctctgccctgtggactgtggagctcatggcatgtgtgtggaa
ggcatttgcatttgctcagatggtttctttggtgacgactgctctcagaccgagtgcctc
aacaactgcagaggccgcggccgctgtgataagggaaactgcgtgtgtgacataccctgg
actggctttgactgctccgagcttatgtgtccaaaaggctgttacgatcatgggcgctgt
gtgaatggcacctgctactgtgatgagggctacaccggggaggactgtagagaacccact
tgtcctaataactgccaaggcaacggtttctgtgttgatggtcgatgtgtctgcactgcc
ggctacagtggagaggactgctctaaactcacctgcctcaacgactgtaacggcagaggg
acgtgcttcaacgggatgtgtatctgtgacataggctaccaaggagaagactgcagccag
ttagcatgtctgaacaactgtaacaacagaggccagtgcataaatggacagtgtgcatgt
gatgttggtttccagggggatgattgctccgagctctcctgtcccagcgactgcctgcac
agagggcgctgcgttaacggccagtgtgtgtgcgatgaaggcttcgctggcgaagactgc
agcatcatgacctgcccctccaactgctatggccgcggcgagtgcatcgatggacgctgc
gcatgtcatgcaggcttcactggtgaggactgcggtgcactgagctgcccaaacaactgc
aagaaccgcgggcgctgcatcgatgggcagtgcgtttgtgacgaaggcttcactggggaa
gactgcagtgagaaagcttgtcccaacgactgcctggccagaggttactgcgttgatggc
aagtgcatgtgtcaggaggggtactctgggaatgactgctctgtgcttgcctgtccagag
aactgcaacaacagggggcgctgcattaacgggaagtgcacatgtgagagtggatatgaa
ggagagagctgtgcagagctcagctgcctcaacaactgccaggacaaaggccgctgtgtg
agcggtcagtgcgtctgtgatgagggatacattggagaggactgctctgaagtgtctcct
ccaaaggaccttaatgtcggcgaggtcaccgctaacacagtggacctgtcctggaacaac
gacatgttggtgacagaataccttgtgacgtatgtacccaccagtcctgggggtcttctc
caggagaacacagtttctggggacaaaacttccaccactgttaaagagcttgaacctggc
atcgaatatctgatcagtgtctatgctgtcctgagcaacaagaggagtgtccctgtcagc
gccagggtggccacagctctcccacagccagagggtttaaaattcaaatcagtgagagag
acctcagttgaagtaatttgggaccagctggacatctcctttgatggctgggagatctat
ttccgcaacacgaaagaagaaaatggaaaagtggtgagcacccttccatcctctcaaaac
cagtttctccagtcaggcctgggaccaggacaagagtatgaagtctccatcaacatcatc
aagaataacacaagaggaccccaaacaaccaaaacagtcacaaccaagactgacggccct
cagcaggtggaggtgaaggatgtcacagactcctcggcactggtgagctggactcagcca
gttgttcctatggacagagtcaccatgttttacaggcccacttccgacccctcagacgaa
agcaatgcagagattttccccccagacaagcaatacagcatcgatggtctgagaccagac
actgagtacacagtgatggtctcctccagcagtggaaacatcagcagtgaccctgtcatc
accactttcactacagctctggatgcccccaagcacctgcggcccgtgtctcagacggac
agcagcatcactctggagtggactaacagtcaggctgatgtcggcatctatcgggtgaaa
tacaccccgatctctggagcaactcacggtgaggaagtgttcctgcgaggaccaggagac
accacaaaagctactatcactgggctaaatccaggggcggagtatgggattggtgttact
gccatgaagatagagagagagagcctcccagccactacaaatgcagaaactgacatcgat
cctcccagagattttgaagaagtcgagtccacagagacctccctcactttgaagtgggag
aaacctacagccaagttcggtggctacaggctggtatacgtctccagagacggccaggtc
gaggaggtggagatcccggccactgcaacgagccatgtcgtgaccagcctgactcctgga
atgggctacactctcacgttgactgcagagaggggacacaagagaagcacgcctgtcatc
ctgtctacagccacagcctcgttcacattttatttagctgattcagacgacgctgagctt
acaactcctacagcctcggaggacaatgtgattagctttgtaaatttagagccctctgag
tcccagttctctgggatggagtctgaggatgagcttggaacgctgactgtttcaggcatc
acgtctgatggatttgacctctcatggagactaaaggctcacagcctttatgatagcttt
gcagtagaatataaagaccctcagcgattatgggatgtgagagaggtccaacttcctgga
aatgccactggctctagatttgaaggcctggcgccattgacagagtatcagataaaactt
tatggaataacaagtagccagagatctgcgctacttgaagctgttgcagtcacagcaccc
gagcctacctctccaggcgtacttacgctgagtattaaagatgccacaacaaccacacag
tctgctctggataatgacacaattcaaaccacagatctcctccatcctgtaaacactgag
cctccttccatctctgatactgttgtgatgagctcaggggctgaaagctcaaacatggat
gtacttggggacttaaaagtcacaaacgctacctccactagtgtaagcttggcttggtct
gcgcccaacgaggcgttcgacagctttatggtggagctcagttctccatcaggggtgaca
caagctcatgtgactacattaccaggaaatgtgaggaaggctgaaatagagggtttgacc
ccctcgacacattatgatgttactttacaagggctggtggatggaaatcgatctttgcct
ctcaaagtttttgctactacagaggagctgaagcccatggtggtgaacctcaccatctct
gacattacatgggacagcttcactgcgtcctggacccccatggttggggactttgacagc
tttgtcattgaggtaacaaacttggagaatttcgcagagagccagaacctctcgctgtct
ggagacgctttcagcctgggcatccctgggctgaatcccaacaccagctacatggttggc
ctgtacgggatgtatgatggctccttccttgagcctgtgtacagtgaagccaccacagag
gctgagccggaggtggagcatctctttgtctctgacatcactgccgacagcttccgtctg
tcgtgggcggcagatgaagacatgtttgacagatttgtgattaaaataagagacagcaaa
aggctagcccatcctaaggagtacagtgtccgcggtgacgagcgaaccatggttttaact
ggactcatgagtggcactgagtatgaaattgagctttatggtatcacattggaccaacgc
tcccaacctatcactggggttgctcagacaggcctgagcactccaagcggaattcacttc
tctgaagtcacggattcttctgccgtagttcactggtctatgtcttcctctcctatggat
acctaccgcatcgtctatgtgccctttgaaggaggaagcccaatgacagtgactgtggac
ggcagtgtgtttgaggttgcgctgcccaacatgatccctggcaaaacctaccaagtgact
gtcagtgctgtgaaaggtctggaggaaagcgaccccagcacagacactgtaaccacagct
ctggacagacctcagggcctgattgcagttaatgtcactgacacgtcagccctgctgctg
tggcaaccgtctgtggccacagtggatggctacgtcatcacctacagggcagattcagtg
tccccggtggtggagcatgtttctggaaacactgtggagtttgagatgggctccttagtt
cctggaacccactacacagttggagttcatgccatgaaagaagctcagaagagtggatct
gctgttactgaattcatcacagatgtggaccctcctcgtgatctgacagctataaacatc
caaactgacagtgctactctgacgtggaaacctccgcaggctgctgtgacgggttacaca
ctcaccttctcttctgctgatggtgtaatcagggaagtggtgctgagcccgacagcctcc
tcttacagcatggctcagctcactggttccacagagtacagtgtaaaactgcaggccatc
gctgggccccagaggagtcggcatgtagccactgtcttcacgaccattggacagttgttc
agacgacccagggactgtgctcagatatatctgaatggagagacgacctctggtctatac
acaatccatgtgggaggagaggagggccagcccatccaggtttactgtgacatgaccaca
gatggcggaggatggacggttgccctcagacgccagaatggaaaactggagttctacagg
aactggaagaactacaccgctggctttggtaacatgaatgatgagttctggctgggtctc
tccaacctttataaaatgacatcctctgggcattatgagctgcgagtggacttgagggac
aaaggggaaaccgcctacgcccagtatgacaagttcacgcttgcagaaccaagaacacgt
tataaaatctacataggggcatacagtggaacagcaggtgactccatgacttaccaccag
ggtcgaccattctcgacctatgacaacgataacgatatcgctgtcaccaactgcgccttg
tcctacaaaggtgcattttggtataaaaactgtcatcgcgtcaacctcatggggaaatac
ggcgacaacagtcacagtaagggaatcaactggttccactggaagggccacgaacactcg
attgaatttgcggagatgaagatcagaccagccaacttcagaaactttgagagcagaaaa
aaacgatcatag
DBGET
integrated database retrieval system
