Paralichthys olivaceus (Japanese flounder): 109626400
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Entry
109626400 CDS
T06037
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109626400 (upf3b)
03015 mRNA surveillance pathway
109626400 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109626400 (upf3b)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109626400 (upf3b)
mRNA cycle factors
P-body specific factors
109626400 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF6980
Motif
Other DBs
NCBI-GeneID:
109626400
NCBI-ProteinID:
XP_019937884
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MKEDKENTRPKERRVELKCEDGEKTEKPKEKKETMTKIVIRRLPPSLTKEDLEEQLQPLP
ELDYMEFFSSDTSLYPHLFARAYLNFRNQEDIVLFRDRFDGYVFIDHRGQEYPAIVEFAP
FQKTAKKKNKKRDAKCGTIAEDPDYKKFLEYYNGDEEKLTSTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRVRDEERRKWREEERRKRKDAEKMKRLEK
PLEKDKDQVKEEPKIKLLKKPDRGEEADAEKHKEKGKKPEKPSKDDRPMGSHEYKRRQNI
DNKEDRGRKGDDDGRKEFRERDTDRDRDREREKERRQREKERIRRQDEDRRRRRERQDGE
NSCRKRDDEGKKERERAFEKKKGENIGDSAHNERPEKLAKDKRDDAGKRERTRNKDRPAI
QLYQPGARSRNRPAGGGESNSADRKPDTETKKVADKGDD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaagaaaacactcgaccgaaggagagaagagtggagctaaagtgtgaa
gatggagaaaagacggagaagcccaaggaaaagaaagagaccatgacaaagattgtgatc
aggcgattaccacccagtctgacgaaggaggatctggaggagcagctgcagccgctgcca
gagctggactacatggagtttttctccagtgacaccagcctctacccgcacctcttcgcc
agggcttacctcaacttcagaaatcaagaagatatcgtcctgttcagggaccgatttgat
ggatatgtattcattgaccacagaggacaggagtatcctgccatcgtagagtttgcccct
ttccaaaaaactgccaagaaaaaaaacaagaagagggatgcaaagtgtggaacgattgct
gaagatccagattacaagaagttcctggaatattacaacggagacgaagaaaagttgacc
tcaacacctgagaccctgctggaagagatcgaggcaaagtcgaaggagcttgttgctaag
aagacaactcctctgctggacttcctgaaaaacaagcagagaatcagggaggaaaagaag
gaagagagaaggaggcgggagcttgaacgaaagcgtgtgcgggatgaggagcgacgcaag
tggcgggaggaggagagacgaaagcgcaaggacgctgagaagatgaagagactcgagaaa
ccgctggagaaagacaaggaccaagttaaagaagagccaaaaattaagctcctgaagaaa
ccagacagaggcgaggaagctgatgcggaaaagcacaaggaaaagggaaagaaaccagag
aagccaagtaaagacgaccgacccatgggcagccatgaatataagaggcgtcagaacatt
gacaataaggaagatcgaggaaggaaaggggatgatgatgggcggaaagagttcagggag
cgtgacacagatcgcgacagagaccgagaacgggagaaggagcggcggcagagagagaag
gagcgcatcaggaggcaggacgaagatcggcggaggaggagggaacgacaggatggagag
aactcgtgcaggaagcgggatgacgaggggaaaaaagagagggagcgtgcctttgagaag
aaaaagggcgaaaacattggagactccgctcacaacgagaggccggagaagctcgccaaa
gacaagcgggacgatgctggcaaaagagagcgaacgcgaaataaagaccgccctgctatt
cagctgtaccagccgggggccagaagccgcaatcgacctgcaggaggaggagaatccaat
tccgctgacaggaagccagataccgagaccaagaaagtggcagacaagggagacgactga
DBGET
integrated database retrieval system
