Paralichthys olivaceus (Japanese flounder): 109626438
Help
Entry
109626438 CDS
T06037
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04145
Phagosome
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109626438
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109626438
09144 Cellular community - eukaryotes
04510 Focal adhesion
109626438
09142 Cell motility
04820 Cytoskeleton in muscle cells
109626438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109626438
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109626438
00536 Glycosaminoglycan binding proteins [BR:
pov00536
]
109626438
Membrane trafficking [BR:
pov04131
]
Endocytosis
Phagocytosis
Opsonins
109626438
Exosome [BR:
pov04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109626438
Exosomal proteins of colorectal cancer cells
109626438
Exosomal proteins of bladder cancer cells
109626438
Glycosaminoglycan binding proteins [BR:
pov00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109626438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
109626438
NCBI-ProteinID:
XP_019937954
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MGLWTALILASQLLLKLCSHVEAQALVYDLLTSPDCLPDLLQGGLAEQGVNEAFILATFK
LQPKTGTTVFGLYNPRDNSKYFEFTVMGKLNRAVLRYLRTDKRMSSVTFNNLVLADGQQH
RLLFHLRGLQQQGPGGVELHLDCRLVETIRDLPAAFQGLPAGYGMVELKTMQARDQESVD
ELKLVVGDTFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVVNELKDVLIQQVK
ETSFLRNTISECQACGLGGTEVVKPRCAPGVCFRDDMCIETTEGVECGPCPDGYTGDGYN
CDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYTGLPVEGVGIVYAQTNKQVCDDIDEC
KGPNNGGCTANSICHNSVGSYHCGSCKTGFTGDQVKGCKPELSCGNSLTNPCDVNAQCSV
ARDGSVSCLCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDPSCKKDNCVYIPNSGQEDADR
DSHGDACDDDADGDGIPNEQDNCPLKPNLDQKNSDKDSHGDACDNCRMIENPDQRDTDGD
GKGDACDEDMDGDGLKNMLDNCQRVQNRDQRDRDGDGVGDACDSCPDIYNPNQSDVDNDL
VGDSCDTNQDSDGDGHQDTKDNCPFVINSSQLDTDKDGLGDECDDDDDNDGIPDTIPPGP
DNCRLVPNPDQTDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSTSGPGEHLRNSLWHTGDTN
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHSTDSL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgtggacggccctgattctggcctcacagctgctgctcaaactgtgctcacat
gtggaagcccaggctctagtctatgatctgctcacctcgcctgattgcctgccagacctg
ctgcaggggggtctggccgagcaaggtgtgaatgaggctttcatcctggccaccttcaag
ctgcaacccaagactggaaccaccgtgttcggcctgtacaacccaagggacaacagcaag
tactttgagttcaccgtgatggggaagctcaacagagctgtgttacgctacctgcggact
gacaagaggatgagctcggtaaccttcaacaacctggtgctggcggatggccaacaacac
agattgttgttccacctgagggggctgcagcagcaggggccaggaggggtggagctgcat
ctggactgcaggctggtggagactatcagggatctccccgctgccttccagggtttgcca
gcaggctatggtatggtggagctaaagaccatgcaagcacgagaccaggagagcgtagac
gagctcaagctggtggttggagacacttttgagaatgttgcttcattgcaagactgccat
ttccaacaaagggactcggttcaaactctgggggtcaacacgaagcagctgtcaaatcaa
atgctggagctaaccaaggtggtaaatgagttgaaagacgtcctcattcagcaggtcaag
gagacctcatttctcagaaacaccatctcagagtgtcaggcctgcggcttgggtggaact
gaggtggtgaaacctaggtgtgccccaggcgtctgtttccgtgacgatatgtgtatagag
acaacggaaggtgtggagtgcggaccctgtcctgatggatacaccggggacggttacaac
tgtgatgatgtggacgagtgccagtttaacccctgcttccccggagtgaagtgcgtcaac
accgccccaggcttccgctgtgacgcctgtccgctgggctacactggcctgcctgtggag
ggtgtggggattgtgtacgctcagaccaacaaacaggtgtgtgatgacattgatgaatgc
aaaggaccaaacaatggaggctgcacggcaaactcaatctgtcacaactctgtgggctcc
tatcactgtggcagctgcaagacgggcttcactggagatcaggtgaaaggctgcaagccg
gagctcagctgcggcaacagcctgaccaacccctgcgatgtcaacgcccaatgtagcgta
gcaagagatgggtcggtctcttgtctgtgtggaattggctgggcaggtaacgggtacctg
tgcgggaaggacactgacattgatggatatccagatgagaaactcaaatgcaaggatcca
agctgcaaaaaggataactgtgtgtacattcctaactctggtcaagaagacgctgacagg
gacagccatggagacgcctgtgatgatgatgcagatggtgatggaattccaaacgaacag
gacaactgcccgttgaagccgaacttggaccagaagaacagcgataaggacagccatggt
gacgcatgtgacaactgtcgcatgatagagaaccccgaccagagggatacagatggtgac
ggcaaaggagacgcctgcgatgaagacatggatggagatggcctgaaaaacatgctggac
aactgccagagagtccagaacagagaccagcgagaccgagatggagacggagtgggagac
gcctgtgacagctgccctgacatctacaacccaaaccagtctgatgtcgataatgacctg
gtcggagactcctgtgacacaaaccaagacagcgatggcgacggtcaccaggataccaag
gataactgcccgttcgtgatcaatagttctcaactggacaccgacaaagacgggctgggt
gacgagtgtgacgatgacgatgacaacgatgggatcccggacacaattccacctggacca
gacaactgtcggctggtaccaaaccctgaccagactgacgacaacaatgacggagttgga
gacatatgtgagtcggactttgaccaggacaaagtcatcgacaggattgacaactgtcct
gagaacgccgaggttaccttgactgacttcagggcctatcagacagtggtgctggaccca
gagggtgacgcccagatcgatcccaactgggttgttttaaaccagggaatggaaattgtt
cagaccatgaatagtgatcctggccttgctgttggttacactgctttcagtggagtggac
tttgaggggacgttccatgtgaatacagtgactgatgatgactacgctggcttcatcttt
ggctatcaggattcctcttccttctacgtggtgatgtggaagcagaccgaacaaacctac
tggcaggcgacacctttcagagctgtggccgagcccggcattcagctgaaggcggtgaag
tctacatcgggccctggggagcacttaaggaactcactgtggcacacgggagacacaaat
gaccaggtgcgtctgctgtggaaggacccgagaaatgtcggctggaaggacaaggtgtcc
taccgctggtacctgcagcaccgcccacaggttggatacatcagagctcggttttatgag
ggaactgagctggtcgcagactctggagtgacgattgacacgaccatgagaggagggcga
cttggcgtgttctgcttctctcaagaaaacatcatctggtccaatctgaaataccgctgc
aatgacaccatccccgaggacttccaggagttcagcactcagcacagcactgactcactc
taa
DBGET
integrated database retrieval system
