Paralichthys olivaceus (Japanese flounder): 109626518
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Entry
109626518 CDS
T06037
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109626518 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109626518 (nup54)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109626518 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
109626518
NCBI-ProteinID:
XP_019938100
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MAFNFGGAAGSTASSAPGFSFGSFGAKTTASTAFGFGTAATTTTASSGFGTLTAPGFGAA
TTTAAAPATGFGFGSTNTGTFGGFGTTTTTAAAPGSTFSFAAPSNTTGGLFGNTQNKGFG
FSSGLGTVTAPGTTGFGTSLGTTGLGGFGGFNIQSTQQQQAGGLFGQQQSQTQPTQLYQQ
VTALSAPTLLGDERDTILAKWNQLQAYWGTGKGYYSNNNPPVDFTQENPFCRFKAVGYSC
VPVSKDEDGLVVLILGRKEADVRVQQQHLVESLHKVLGNNQTLTVNVDGVKALPNDQTEV
IIYVVERSPNGTSKRIPATTLFSYLEQGNVKLQLTQIGVAMSVTRTELSPAQLKQLLQNA
PAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMTTQHQTRVDIISNDISE
LQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSE
LNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSHLISV
IKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaattttggcggtgccgcgggcagcacagcgtcaagcgcccccgggttttca
ttcggttcatttggtgcaaagaccacagcatccacagcgtttggctttggcaccgcagcc
accaccaccacagcctcatctggatttggcactcttacagcccctgggtttggggcagcc
accaccactgctgctgcaccagccacaggatttggttttggctccaccaacactggcaca
ttcggtggctttgggacgactacaaccactgctgctgcgccagggtccacttttagcttt
gctgctccctcgaacaccacaggaggcctgtttggtaacacacagaacaaagggtttgga
ttctcctctgggcttggcactgtaaccgcgcctggaacaacaggatttgggacgagttta
ggaacaactggtcttggagggttcggaggctttaatatccagtcaactcagcaacagcaa
gcaggaggcttgtttggccagcagcagagtcagactcagcccactcagctttaccagcag
gtcaccgcgctatcagctcccaccttgttgggagatgagcgtgacaccatcttggccaaa
tggaaccagctgcaggcttactggggcaccgggaagggctactacagcaacaacaaccca
cctgtggacttcacccaggagaacccattctgcaggttcaaggcagtgggctatagctgt
gtcccagtgagcaaggatgaggatggtttagtggttctgattcttggaaggaaggaagct
gatgtgcgagtgcagcagcagcatctggtggagtctctccataaggtgctgggaaacaac
caaacactcactgtcaatgtggatggtgtcaaagccctgccgaatgaccagactgaggtg
atcatttacgtggtggagcgttcccctaatggcacctccaagcggatccctgccaccaca
ctctttagttatttggagcagggcaacgtcaagctccagctcacacagattggagtggcc
atgtccgtcacacgcacagagttgtctccagcacagctcaaacagctgctgcaaaatgct
cctgcaggagtggaccctatcatctgggagcaggccaaggtagacaaccccgacccagag
aagttgatcccagttcctatggtgggttttaaggagctccttcgcagactgcagatccag
gagcagatgaccacacagcatcagacaagagtggatataatctccaatgacatcagtgaa
ctgcagaagaaccaggcgaccacagttgcaaagatcgcccagtacaagaggaaactgatg
gacctctctcacagagtgctgcaggtgctgattaaacaggagattcagaggaaaagtggt
tacgctatccaggtggatgaggagcatctcagggtgcagctggacacgattcagtctgaa
ctcaacgcccccacacagttcaagggtcgtttgaatgaattaatgtcccagatccggatg
cagaaccactttggagcagtgagatcagaagagcgctacagtgttgatgcagatcttctc
agagaaatcaaacaacacttgaagcagcagcaggacggtctaagtcatttgatcagcgtc
atcaaagacgacttggaagacatcaaacttattgagcacgggctgagcgacagtggacac
atgagaggaggcatcctgagctga
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integrated database retrieval system
