Paralichthys olivaceus (Japanese flounder): 109626961
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Entry
109626961 CDS
T06037
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pov01002
]
109626961 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109626961 (usp42)
Enzymes [BR:
pov01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109626961 (usp42)
Peptidases and inhibitors [BR:
pov01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109626961 (usp42)
Ubiquitin system [BR:
pov04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109626961 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109626961
NCBI-ProteinID:
XP_019938795
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MTIVDRSPENSGHESVGCKRSPFSSGKAGTYGSCSSSRAVGPTMPSDSPRLKAPGGCLGP
TPGAAVYNSTLSSVDRPKEQVISNGDGIELPQKVLFPPERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATSFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTATSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRNANVLTLSLKRFANFSGGKLTKDVKYPEYLDMRQFMSQPQGESHVYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIKTVLNQQAYVLFYIKSSDVKKAG
DYSHMNHNRGIPGQSSPRPVVTPNINTTVHHNNIGFIGPQLPPQMTKSTHYVNGNGSLRD
YPTSSKPSASSSVAEKPNHGLASSSSSISHSIGRPTMIPVHNKRQKLSFCIGQSKQNRPS
SSSSSSSSSSSSSSSSSTTSSSSSPSCSQPSSASSSSSSSLSSSQSTSDIHSTVRFVPRQ
LPPVNGRSCSNGDHHTGGNGASFLVPYGQESSEESDQENCSALDNGGLAKSHLNGNNGTG
GVFEKYPQATNRQSGVHHNGNGLSYGISKSGQNGHHYGQHKVNGHNTSDKISGINHGSLS
SVATIAANGVDGDHSQTSKEAFNSASSSQTCSSRSIHPAASESQHLSPPHKRAKIVSDPL
PQHTAPSAVSIPPSATATNTHSVASGGSASSSSHHGNPAALSTPPDCSQSTSGASAAPQK
VCVSGDEAKNLPQKNGPSAGVEGRTDAKEQLQSKPSSGGSDGQYDRNRDRLHSDWSRDRE
RHYRDRSQERESDGDRYRHRRDYRDHRHHHRVHSDHLPHHDRHYRDSERRYERTVHHPRE
RNRDRSSHHYHRHRSREDWDFERRGHGHSHREESRGRWRWQQESRESRVTKDKSNGRERN
SYPSKEETSFPATVSETSAKYKGLPPLPPLSKSRSAPNTDDQNHRRVADNLNKEREDSPE
ARHSKKHKKSKKKKKSKDKDRHRESGSSDVDSDRVAEIKMKKKKNRRQRDGEAKQHSPGA
TQSHKNRSSEERESCKRSYYDTEDATHNYGFSPEKRRRTDYADPRNDHLPLSQHISATNS
STHRHLNGHTGNGYSRTNGNSH
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatctccagaaaactctggccacgagtcagtcgggtgtaagaga
tctcccttctccagtggaaaagctgggacgtacggcagctgttccagcagccgggcggtg
ggtcccaccatgcccagtgattctcctcggctgaaggctccaggaggctgcctgggcccg
acacctggagctgccgtctacaacagtactctctcatctgtggaccggcccaaggagcaa
gtgatcagcaatggtgatggcattgagttgccacagaaggtcctcttccctccagagcgc
ctcaacctgaaatggacccaggttcaccggatcggtgctggcctccagaacatggggaac
acatgcttcctcaactcagcgctgcagtgtctcacctacactcctccgtttgctaactac
atgctgacacgcgagcactctaaaacatgtcacgagccagggttctgtatgatgtgtacc
atgcaaaaccacatcattcaggtctttgcaaactctgggaatgtcatcaagcccattggt
gtgctcaatgagctcaaaaggatagcaaagcacttccgctatggaagccaagaggatgcc
catgaattcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacacaggcaacctctttcatccatcaagtatttggcgggtacctaagg
tccagagttaaatgtttaaactgcaaagcagtctcagatacatttgatccctttctagat
atcactctagaaattaagacggctaccagcgtctcaaaagctctggagcagtttgttaag
ccggagcagctggatggagaaaacgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttactatccaccgcaatgccaacgtgctcaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaacttacaaaggatgtgaaatatccagagtacctggac
atgcggcagttcatgtctcagccccaaggagaatctcatgtctacggcctttacgctgtg
ctggtccactctggattcagctgtcacgctggacactacttctgctatattaaggcgagc
aatggtcagtggtatcagatgaacgactcctctgtgtctgtcagcgacatcaagactgtt
ctcaaccagcaggcctatgtccttttctacataaagtccagtgatgtgaaaaaagcaggg
gactacagtcacatgaaccacaaccgtggtatccctggtcagtcgtcaccacgcccggtg
gtgacaccaaacatcaacaccaccgtccatcacaacaacattggctttataggtccccag
ctgccaccacaaatgaccaagagcactcactatgtcaatgggaatggatctctgagggac
tatcccacaagctccaagcccagcgccagcagtagtgttgcggaaaaacctaaccatgga
ctggcctcttcctcctcctccatctcccactcaatcggccggcccacaatgatcccagtc
cacaacaaacgtcagaagctttcattttgcattggacaaagcaagcagaaccgcccatcc
tcctcctcttcctcctcctcctcctcctcctcctcctcctcctcctcctccaccacctcc
tcctcctcctccccctcttgcagccagccttcctctgccagcagctcctcctccagctct
ctatcctcctcacagtctacctcagacatccattcaactgttcgattcgttccacgtcag
cttccccccgttaacggcaggtcttgcagtaatggcgatcaccacacgggaggtaacgga
gcatcgttcctggtgccgtatggccaagagtcttcagaggaatcagaccaggagaactgt
agcgctctggataatggcggcttagctaagtctcacctcaacggaaacaatggaacagga
ggcgtctttgagaaatatcctcaagccacaaacagacagtcaggagtgcaccacaatggt
aacggattatcatatggcatctctaaatctggccaaaacggacaccattatggacaacac
aaagttaatggacacaacacttctgacaagatatctggcattaatcatggatctttgtcc
tctgtggctaccattgctgctaatggtgtagatggtgaccatagtcaaacaagcaaagag
gcgtttaattcagcctcgtcatcacagacctgttcgtctcggagcatccatcctgctgcc
agtgaaagccaacacctctcccctcctcacaaaagggctaaaattgtgtctgaccccctg
ccccagcatacagctccctctgcggttagcattccaccatcagctactgctacaaatacc
cattctgttgcatctggaggatctgcttcctcctcatcacatcatggcaaccctgcggcc
ttatccaccccgccagactgctcccagagcaccagtggagcatctgctgctccacagaag
gtttgtgtaagtggggatgaagccaagaacctaccacagaaaaacgggccgtcagcaggg
gtggaaggacgaacagatgccaaggagcagctacagtctaagcccagttctgggggcagc
gacggacaatatgacagaaacagagacaggctgcactctgactggagcagagacagagag
agacactacagggaccggagtcaggagcgtgagagtgacggtgatcggtatcggcacaga
agggactaccgagatcaccgccaccatcatcgcgtgcacagtgatcatttgcctcatcac
gatcgacactacagggactcagagcgtcgctatgagcggactgtccaccacccaagggag
cgcaatcgcgacaggtcctctcaccattaccaccgccatcgatccagagaggactgggat
tttgagcggaggggccatggtcactctcaccgcgaggagtctcgtggtcgctggaggtgg
cagcaggagagtcgagaatcccgggtaacgaaggacaagagcaacggcagagagaggaac
tcttacccttcaaaagaggagacttcctttcctgccacagtgtcagaaacatcggcaaag
tacaagggcttgccgcctctgcctcctctctccaagtcgagatcagctccgaacacagac
gatcaaaatcacaggagagttgctgataatctgaataaggagagagaggacagccctgaa
gcccgtcactctaaaaaacataaaaagagcaagaagaaaaagaagtcgaaggacaaagac
agacacagagagagcggaagctctgacgttgattccgacagagttgcggaaataaaaatg
aagaagaagaaaaacaggcggcagagggatggcgaggccaagcagcacagcccaggcgcc
acacagagccacaagaacagaagcagcgaggaaagggaaagctgcaagcggagttactat
gacacggaggacgctacacacaactatggtttttcaccagaaaagcgcaggcgcacagat
tacgctgatcctagaaatgaccacctacccctctcccaacacatttcagccaccaacagt
tcaactcaccgccatctcaatggacacacaggaaacggttacagtcgaaccaatggcaac
tcccactga
DBGET
integrated database retrieval system
