Paralichthys olivaceus (Japanese flounder): 109626974
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Entry
109626974 CDS
T06037
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03430
Mismatch repair
pov03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109626974 (pms2)
03460 Fanconi anemia pathway
109626974 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109626974 (pms2)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109626974 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109626974
NCBI-ProteinID:
XP_019938815
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MSDACSEPAGAIKAIDKHSVHQICSGQVVLTLSTAVKELVENSIDAGATNIDVKLKECGA
ELVEVSDNGKGVEEANFEGLTLKHHTSKIRDFSDLIHVETFGFRGEALSSLCALSNLSVV
TCHESNQVGTKLVFDHKGHTVQRSPHPRQQGTTVSLQQLFYTLPVRHKEFQRNIKKEYTK
MIHVLQSYCIISTGVRITCSNQNEKGKRSTVLSTSGSHSMRDNIGAIFGPKQLQSLLPFQ
QLSPTENIIEEYGLTEADLPKQLFTITGFVSSGEHGVGRSATDRQFFFINNRPCDPLKVN
KVVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKTSLISMY
ETGVNKISLNYTHMPRPNATSDLCPVIKSNQNAPQPAESMEPAIQRPKSSLNLASLKAAF
SSHHSSSSGSNLNTSKAANSGPAQKTLQSFFNSSVKPSASSPSVKSPLTLTECSPVGKSA
LDGFRYRQISCGDADHDRDSAVSSFVSTTAAPDSLCSGLEVSSPEPVIDRLRVKLEESEE
TSNNHPTVPEAPASQTEPCASEEDGAVSPDAKRARKENTEVKPNTFSNCSVGSSSTAVDA
PVCVRRRTVPLQFSLQELEGKIKRIQERQKQNVGEELRYRRFRAKINPGENQCAEDELRK
EISKDMFKEMEIIGQFNLGFIIAKLNSDIFMVDQHATDEKYNFEMLQQHTVLQGQKLIAP
QKLHLTAVSENVLLENIEIFRKNGFEFLVEEDAQVMERVKLVSLPTSKNWTFGPADIEEL
IFMLSDSPGVMCRPSRVRQMFASRACRKSIMIGTALSVSEMKKLLVHMGEIEHPWNCPHG
RPTMRHLVNLDIISPD
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcttgctctgaacctgcgggagccatcaaggctattgacaagcactcagtg
catcagatctgctcaggacaggtggtgctgactttatccactgccgtcaaagagctggtg
gaaaacagcattgatgcaggagccaccaacattgatgtgaagctgaaggagtgtggtgct
gaactagtggaagtgtcagacaatggcaaaggtgtggaggaggccaactttgaaggactg
acactgaagcatcacacgtcaaaaatcagggatttctccgatctcatccatgtggagacg
tttggcttcagaggtgaagcgctcagctctctgtgtgctctgagcaacctgagtgtggtg
acgtgccatgagtccaaccaggtggggaccaagctggtgtttgaccacaaaggccacacg
gtgcagcggtctccccatccccgtcagcaaggcaccacagtcagcctgcagcagctcttc
tacaccctgcccgttcgacacaaagagttccaacgcaatattaagaaggagtacaccaaa
atgatccatgtcctgcagtcgtactgtatcatctccacaggagtgcgtattacctgctcc
aaccaaaatgagaagggaaaacgcagcacagtgctgagcaccagtggaagccacagcatg
agagacaacataggagccatatttggaccaaaacagctacagagtcttctaccctttcaa
caactctcacctacagaaaatattattgaagaatatggactgacagaagcagatcttccc
aaacagcttttcaccatcacagggtttgtgtcaagcggggaacatggcgtcgggagaagc
gccacagacagacagttctttttcattaacaaccgaccatgtgatcccctcaaggtgaac
aaagttgtgaatgaagtgtatcacatgtataacagacatcagtatccatttgtggccttg
aacatagccgtcgcctcagactgtgtggacgtgaacgtaaccccagacaaacgacagatt
ttactccaggaggagaagctgttgctggctattctaaagacctctctcatcagcatgtat
gagactggagtcaataagatcagtctgaactatacacacatgcccagacccaatgcgacg
tctgatttatgtccggtcatcaaatctaatcagaacgcgccacaacctgcagaatccatg
gaaccagcaattcagaggccaaagtcgtccttgaacctggccagcctgaaagctgcgttt
tcaagtcaccacagctccagttctgggagcaatttaaacacgtcaaaagcagccaacagc
ggcccagcacagaaaactctgcagtctttttttaattcttctgtaaaaccttctgcttcc
agcccaagtgtgaaatctcctttgactctcactgaatgctccccagtgggaaaatctgca
ctagatggattcagatacagacagatatcgtgtggtgacgcagaccacgacagagacagt
gctgtgtccagttttgtttccactacggcagctccggacagtctgtgttctggcctggag
gtcagttctcctgaaccggtgatcgacaggctcagagtaaaactggaagaatcagaagag
acatcaaacaatcatccgactgttcctgaagccccagcgtcacaaactgagccgtgcgct
tcagaagaggatggtgctgtgagcccggatgccaagcgggccaggaaggagaatacagaa
gtcaaacccaacactttctcaaactgttctgtgggatcctcttccactgcagtggatgct
ccagtctgtgtacggaggaggacggtgcctctgcagttctctctacaagagctcgaaggg
aagataaagaggatacaggagcggcagaagcaaaacgttggtgaggagctacgctacaga
cgcttccgggccaagatcaaccctggagaaaaccagtgtgcagaggacgagctgaggaag
gagatcagtaaagacatgtttaaagagatggagatcatcgggcagtttaacctgggcttc
attatcgctaaactcaactcggacatcttcatggttgaccaacacgccacagatgagaag
tacaactttgagatgctgcagcagcacacggtgctccaaggacagaaactcatcgcccct
cagaaacttcacctcactgcggtcagtgagaacgtactcttggagaacattgagattttc
agaaagaacggctttgagtttctggttgaggaggatgctcaggtgatggagagggtgaag
ctggtgtctctacccacaagtaagaactggacattcggtccagctgacattgaggagctg
atcttcatgttgagtgacagcccaggtgtcatgtgtcgaccatccagggtcagacagatg
tttgcctccagagcttgtcgcaaatctatcatgatcggcactgctctgagtgtcagcgag
atgaagaagctgttggttcacatgggggagatcgagcatccgtggaactgtcctcacggc
agacccacgatgagacacctcgtcaacctggacatcatctcaccagactga
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