Paralichthys olivaceus (Japanese flounder): 109626992
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Entry
109626992 CDS
T06037
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109626992 (rnf40)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109626992 (rnf40)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
109626992 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
ADIP
zf-RING_UBOX
zf-RING_2
OVT1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
109626992
NCBI-ProteinID:
XP_019938848
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MSGVGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVIQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVHVLRKRIVPDAPV
ASTPAPPSAPLSDPTPMEEDGVNLASPTTAVPPPPLPEVQNEGEQTEKQQEECPEERQEE
QQQPPPPTGSEESMTTTELSQNSTTDASPPPPPLSDNAKGFLTTLEHSSEEELTLHLQDR
MQFSKEAIACLVCVFDRLHSRIDSMCKHVQASACEDSSQSDIINVSHTLLDENSRLRDLA
TLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAM
EQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQAELQEAV
RESEKLKMDLRNIPEEVVKETLEYKCLQSQFSVLYNESLGVKTQLDEARALLLTAKNAHL
RQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMR
HLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTAVLILEETTSDSIDVKKEE
DDDQEEEEEERRKELERQRAREREREAERERERERERERQRSDELKRKDSDTLKMLRVEL
KKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESK
KLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQL
REKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLRFKTQVDAQLLVVQKLEEKEGVLQ
STLATLEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARE
RESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETV
LTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgttgggggaggaaagcgtccctcagggggggacagcccccctggcccacct
gagaagaaaagcaaaaaggaggagaagaccaccactacactcatcgagcccattcgaata
gctggggtctcttcaacggaggaaatggacatgaaggtgatccagttcaagaataagaaa
ctatgtgagcggctggagcagagacagaccatggaggatgagttacgagagaaaattgag
aagctggagaagagacaagccactgatgacaccacccttctgattgtcaaccgctactgg
tcacagttggaagagaacgtgcatgttctacgcaaacgcattgtgccagatgctccagtg
gcatctaccccggccccgccctctgcccctctctctgatcccacaccaatggaggaagat
ggcgtcaatctggcttcaccaaccacagcagttcctccacctccccttccagaagtccag
aatgagggcgagcagacagagaaacagcaggaggagtgtccagaagagcgtcaggaggag
cagcagcagccacctcctcctacggggtcagaagagtcaatgacaacgacagagctgtca
cagaactcaacaacagatgcttcgccgcctcctcctcctttaagtgataatgccaagggt
ttcctgaccacgctggagcacagcagcgaggaagagctcaccctgcacctccaggaccgc
atgcagttcagcaaggaagcaattgcctgcttggtctgtgtctttgacaggctgcacagt
cgtatcgacagtatgtgcaagcatgtccaagcttcagcatgtgaggacagtagccagtct
gacatcatcaatgttagccacactctgctggatgagaacagtcgactgagggacctggcc
actctcctgcagggtcgtcaccacaagatgtctatggagtacaacgagttggtggacaag
gtgaccagctccgagaccaaggtgtctgagatggagacaacagttgaggacctgcagtgg
gacattgagaaactccgcaacagggaacagaagcttaacaaacatctggcagaggccatg
gaacagctgaagtctggatacagcagcactggtagctcaggcgggctacctggaggtcag
attacactgaatattcagaagtttgagagtctcaatgcagagttggagcacaaccaggag
ttagcaaacagccgcatggcagagttagagaaactgcaggcggagctccaggaggctgtg
agagagagcgagaagctcaagatggatttgcgcaacattccagaagaggttgtgaaggag
actctagagtataaatgtctgcagtctcagttctcagtgctgtacaatgagtctcttggg
gtcaaaacccagctggatgaggcacgggcgctcctgcttactgcaaagaacgcccacctc
cgacagattgagcacatggagagtgatgagctgtcccttcaaaagaagctgcgcactgag
gtcatccagctggaggataccctggctcaggttcgcaaagagtatgagatgctgcgcatt
gagttcgagcagaacctggcagccaacgagcaagcaggaccaatcaacagggagatgcga
cacttaatcagtagccttcagaaccacaacctgcagttgaaaggtgacgtgcagcgttac
aagaggaagttgcgggaaacacagatggagatcaataagttgcgttgtcagagtggcgac
acagcggttctgattctggaggagacgacgagtgacagcatcgacgtgaagaaagaggag
gatgacgaccaggaggaggaagaggaggagaggaggaaggagcttgagagacagcgggcc
agggagagggagcgagaggctgagcgggaacgagagagggagcgtgagagagagagacag
cgcagcgacgagctgaagagaaaagactcggacacactgaagatgctcagagtagaactc
aaaaaagcccaggagtcccagaaagagatgaagctcttgttggacatgtacaagtcagct
ccaaaggagcagagggacaaagtgcagctaatggcagctgagcgcaaatctaaagctgag
gtggatgagctgaggatgagagtacgagagctggaggagagagagaggaaggaaagcaag
aagctggctgatgaagatgccctcaggaagatccgagtagcagaagagaccattgaacat
ctgcagaagaaacttgctgcaactaagcaggaggaggaagccctgctgagtgagatggac
gtcacgggccaggcctttgaagacatgcaggagcagaacagccgactgttgcagcagtta
agggagaaggacgacgccaatttcaagctgatgagcgagcgaatcaaatcgaaccagatc
tacaagctgctgaaagaagagaaggaggagctggccgaccaagtcctccgattcaaaacc
caggtggatgctcagctgctggttgttcagaagctagaagagaaagagggcgtcctccag
agcacgctggccactctggaaaaagagctggccgtccggacgcaagcactagagctcaac
aagaggaaggcagtggaggctgcccagctggcagaagacctgaaggtgcagctggagcac
acgcaggccaagcttaaggagatccaggtctctgtggcagagaatcgcacggcccgggag
agggagagcagcaacctgaaacgagcacaggaggatctgtcccggctgaggcgaaagctg
gagaaacagaagaaggtggaggtttactctgatgctgatgagatcctgcaggaggagatc
aaccagtacaaggccaagctgcgctgcccctgctgcaacacgcgagacaaggagacggtg
ctcaccaagtgtttccacgtattctgctacgaatgtctgaagatgcgttacgacacccga
cagaggaagtgccccaagtgcaactgtgccttcggagctaacgactttcaccgcatctac
attacctaa
DBGET
integrated database retrieval system
