Paralichthys olivaceus (Japanese flounder): 109627025
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Entry
109627025 CDS
T06037
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109627025 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109627025 (gspt1)
03012 Translation factors [BR:
pov03012
]
109627025 (gspt1)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109627025 (gspt1)
Translation factors [BR:
pov03012
]
Eukaryotic type
Release factors
109627025 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109627025
NCBI-ProteinID:
XP_019938906
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MDPRDTAPDSWELEEDAEAPAAAAAAELPGAFAALNVNAKPFVPNVNAPVFVPSFLQSSA
VEMPVADGAPDPVASMEVAETAAPVENGGTEADMTTEEETWEQKEEPGGGGGGPDDLGTE
GACEEGATRKEDEEMMEEEEEEMPIPKMAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIVLVNKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGSNLKDPVP
ECPWYTGLPFIPHLDSLPNFTRSSDGAVRLPIVDKYKXXXXXXXXXLESGTISKAQQLVM
MPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCI
ARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctagaggaggatgccgaggccccg
gctgctgccgcggcggcggagctcccgggcgccttcgccgccctcaacgtcaacgccaag
ccgttcgtccccaacgtgaacgccccggtgttcgtgccgagcttcctccaaagcagcgcc
gtggaaatgccagtcgcagacggtgcccctgatccagtggccagcatggaggtggcggag
acagccgctccggtggagaatggaggcacggaggcagacatgaccacggaggaagagacg
tgggagcagaaggaggagccgggaggaggtggcggaggaccggacgacctggggacggaa
ggagcgtgcgaggaaggcgccacaaggaaagaggacgaggagatgatggaagaagaagag
gaggagatgcccatacccaaaatggctccggctccaccagatgcccccaagaaagagcat
gttaatgtggtcttcattggtcacgtagatgccggcaaatcaactattggaggacagata
atgtacttaactggaatggtggagaagcgaaccctggaaaaatatgaaagagaagcgaaa
gagaagaacagggagacatggtacctgtcgtgggctctggacacaaaccaggaggagaga
gacaaagggaagacggtggaggttggcagagcttattttgagactgagaaaaaacatttc
accatcctcgatgcccccggacacaaaagctttgtccccaacatgatcgggggagcgtcg
caagctgaccttgcagtcctggtcatttctgcgaggaagggggagtttgagaccggtttt
gagaagggtggacagacacgggaacatgccatgctggctaaaacggcaggagtcaaacat
ctcattgtcctggttaacaagatggatgaccccactgtcaactggagcctggaaaggtat
gaggagtgtaaggagaagctggtgccatttctgaagaaggtgggcttcaaccccaagaag
gacatccactttatgccttgttctggactcacaggttccaacctcaaggaccctgtacct
gaatgcccctggtacacgggtttgccatttattccccacctggacagtttgccaaacttc
accagatccagtgatggagcagtcagactaccaatcgttgacaagtacaagnnnnnnnnn
nnnnnnnnnnnnnnnnnnctggagtctggaaccatcagtaaagcccagcagctggtcatg
atgccaaacaggcatacagtggaggtactgagcctgctaagcgatgatgtggagacggac
gatgcaactccaggggagaatctgaagttgaggctgaaaggcatcgaggaggaagaaatc
ctgcctgggtttattctctgtagtcccgacaacctctgccactctggtcgcaccttcgat
gcacagattgtcatcattgaacacaaatcaatcatttgtcctggttacaatgcagtactt
cacatccacacctgcattgaagaagtgcaaatcacagccttaatctgcctggtggataag
aaaactggagagaaaagcaaaacacgaccacgcttcgtaaagcaggaccaggtttgtatc
gccaggctccgggcagcaggggtcatctgcttagaaaccttcaaagacttccctcaaatg
ggacgattcacgctgagagatgaaggcaaaactatcgccatcggcaaagtgctgaaactg
gtgccagaaaaggactaa
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