Paralichthys olivaceus (Japanese flounder): 109627173
Help
Entry
109627173 CDS
T06037
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03420
Nucleotide excision repair
pov03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109627173 (ercc4)
03460 Fanconi anemia pathway
109627173 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pov03032
]
109627173 (ercc4)
03400 DNA repair and recombination proteins [BR:
pov03400
]
109627173 (ercc4)
DNA replication proteins [BR:
pov03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109627173 (ercc4)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
109627173 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
109627173
NCBI-ProteinID:
XP_019939176
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGCDGLLVAAEGMGMDRILLQFMRVHSERDSLVLLLNTTTPEQE
YFTEQLRVEGLTHLPRTVTSDVQSTERYTVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALERHKPEVVELHVSLTPAMRAIQSSILDIMSACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKIFGSNSGWLFLDSSTSMFVNARGRVYRMSESKKKLKVGAEAEKVKLSSTSEV
KRDLVLEKSPKWEALTEVLQEIERENKSSQHEPGRVLICASDDRTCAQLQQYIRRGSDWL
LNRLYARTIGKRDPAAAAALELDSHKKSKGWPKRGTKGKEPAQKKNSKSTKSKSRPSLTL
TQMVGKEETAEAAAMGSSGDEEELMDDEEGEEGRLKLDLSSDAYYGVLKEPLTVIHPLKG
CTDPHSLTRVLHEVDPSFVVLYDAEVSFVRQLEIYKATRPGKALRVYFLIYGGSTEEQKY
LTALSREKKAFEHLIREKATMVIPEEREGREDTNLDLARNLEPANATTNTRKAGGQEQSK
EPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSISDLIGSLQSG
RLYTQCLSMTRYYKKPVLLIEFDPAKPFSLMARSDFRHEISSNDISSKLTLLTLHFPRLR
ILWCPSPHVTADLFLELKQGRLEPDAAAAQAVTAESDIVAESAGLYNPGPYDFLLKMPGV
NTKNYRALIRNADSLADLAKLSKDKLAEILGNANNGKLLYEFLHNVADVPAPVQRAKKTS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcccgctgctggagttcgagacggagatgttcctgagtctgttcggctgtgac
gggctgctggtggcggcggaggggatggggatggaccgcatcctgctgcagttcatgcgg
gttcactcggagcgggacagcctggtcctcctgctcaacacgaccacaccggagcaggag
tatttcacggagcagctgcgggttgagggcttgacccacctgcccaggacggtgaccagc
gatgtccagagcacagagcgttacactgtttacaccgagggaggagtgctgtttgtcacc
agtagaatcctggtggttgacttcctcaccgaccgcatccctgctcatctcatatccggc
atcctggtgtaccgtgcccataaaatcatcgagtcttgtcaggaggccttcatccttcgt
ctgttcagacagaagaacaagacaggattcatcaaggccttcactgataaggccacagcg
ttctcctcgggcttctgccaggtggagcgtgtgatgaggaacctcttcgtcaagaagctc
tatctgtggcccaggttccaggcatcagtaaacacagcactggaaaggcataaaccagag
gtggtggagctccatgtgtcactgacaccggctatgagggccattcagagctccatcctt
gacataatgagcgcctgtctgaaggagctgaaacgctacaaccctacactggaggctgag
gacctctcactggagaacacacttggaaatgcgtttgaaaagaccattcgacattacctg
gaccccctgtggcaccaactgggagccaagaccaaggccctggtccaagacctgaaggtg
ttgagagttcttttgctctacctcacacagtacgactgtgtcaccttcctcaatctgctt
gagtcgcttcgctccagccaaaagatctttggctccaattcagggtggctgttcctcgac
tcgagcacttccatgtttgtgaatgccaggggtcgtgtataccgcatgagtgagagcaag
aagaaactcaaggtgggggcagaggctgagaaagtgaagttatcctcgacctcagaggtg
aaaagagacctggtgctggagaagagcccaaagtgggaggctctaactgaggtgctgcag
gagattgagagagagaacaagagctctcaacatgaaccaggtcgcgtactgatctgtgcc
agtgatgaccgaacttgtgcccagctgcagcagtacatcaggcgcggctctgattggctg
ctcaacagactatatgctcgcacaatcggtaaacgggaccctgctgctgccgctgccctg
gagctcgactctcacaaaaagagcaaaggctggcccaaaagaggaaccaaggggaaagag
cctgctcagaaaaaaaactcaaagtccacgaagagtaaaagccgaccatctctgaccctg
acccagatggtcgggaaggaggagacggcggaggcagcagcaatgggcagcagcggagat
gaggaggaattgatggatgacgaagaaggcgaggaagggcgactgaagttggatttgtca
tctgacgcttactatggtgtcctgaaggagccgctgactgtcatccacccacttaaaggc
tgcactgacccccacagcttgacgcgggtgctgcacgaggtggatcccagttttgtggtg
ctctacgatgctgaagtgagttttgtgcgacaacttgagatctacaaagccactcggcct
ggaaaagcactcagggtgtatttcctcatctatggagggtcgacagaagaacagaagtac
ctcacagcgctgtctcgggaaaagaaagcatttgaacacctcatcagggaaaaagctacc
atggtcataccagaggagagggagggacgagaagacaccaacctagatcttgccagaaat
ttagagcctgccaacgccaccaccaacacccgcaaagcaggaggccaggagcagtccaaa
gagccctcacgagtaattgtggacatgcgtgagttccgcagtgaactcccttccttgctg
caccgccgtgggctggacattgagcctgtcaccctagaagtcggggactacatccttacc
ccggacacatgcgtggagcgcaagagcatcagtgatctgattggctctttgcagagcggc
cgtctctacacccagtgtctctccatgacccgttattacaaaaagccagtgctgctcatt
gagtttgacccagctaaaccgttttccttaatggctcgatcagatttccgccatgagatc
tcatctaatgacatttcgtcaaagctcaccttactcactttgcatttcccccgcctgcga
atactatggtgtccctccccacatgtcacagctgacctcttcctggagctgaagcaaggc
cgcctggaacccgatgctgcagcagctcaggcagtcacggccgagtcggacatagtggct
gaatcagcagggctctacaacccaggaccttatgacttcctgttgaaaatgcctggggtc
aatacaaaaaactatagggccctgataagaaatgcagacagcctggcagatttagccaaa
ctcagcaaggacaagctcgcggaaatactgggaaatgcgaacaatggtaagttactgtat
gagtttctgcataatgttgctgatgttcctgctcccgtgcagagggcaaaaaagacatca
tag
DBGET
integrated database retrieval system
