Paralichthys olivaceus (Japanese flounder): 109627531
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Entry
109627531 CDS
T06037
Symbol
abca1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov02010
ABC transporters
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109627531 (abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109627531 (abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pov02000
]
109627531 (abca1)
Transporters [BR:
pov02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109627531 (abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
109627531
NCBI-ProteinID:
XP_019939644
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MAVFTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMHYPPFEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPAVVGNFNDSIISRLFTDAKKILLYSQNDK
SYEGYKGLLRALRKLQKNTASFKLKDFLKDNETLSHFLHHNASLPRHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTQLEEFVHIADRNVSHMTQEIICKSSSDWLNKAQSHFLSNLDF
LKPIRKDVKSDPKVVQEVSAATDHLLESLGALAVELAGMNSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSEPLSSYDNSSTPYC
NSMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMRPKIWSFMENSEEMDLVRTLLQNNASAAFFNSQLSDTEWRVSDVFDFLSKSSEDHR
PAGSAFTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDITHSNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEHGIIRAITGSKERTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KVVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYFEAVFPGQYGIPRAWYFPFTRTYWCGEKQNRHISTPLSKKGNTEAVCIEEEPSH
IDPGVYIENLVKVYSHGNKLAVDELSLRFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYGRLKGLPEEKVKAEMEQ
IVNDVGLPHKRQSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLTLQSCRNSASTVCYTKKTEKEDSVSDSSSDAGLGSEPESETTTIDVSLISNVIFKHVA
EARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDSVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFEFNDSEGDPESRETDWLSGT
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALDPSMYGEQFTFISNDMPENAHTNKLLEALMEKPGFGTRCMEGEPATNISCTA
VEDEWSIPQVSQGVKDMFDNGNWTMENPSPLCECSCEGRKRMLPECPAGAGGLPPPHMKI
SDNDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGAPGSQFLSNRDEI
DDAIAHLRRRFRLERGAAADRFFHSLSSFVQGLDTKNNVKIWFNNKGWHSIGSFLNVMNN
GILRASLPAGKDPSKFGISAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHLQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGVIFFCITVLIQYRFCIKARSSTSHLKPIGEEDEDVARERQRILGGGGQTDI
LELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTGGEAY
LAGKSVTSEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNTILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMEFIEQELPGSTLKEKHRNMLQYQLSSSLTSLARIFSLLSKNKEALSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDIHLSKRDAVVVDFSQLNSFLTDNKTRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttcactcaactgggtttactgctttggaaaaacttcacctaccgacggaga
cagactatccagctgctgattgaaataatctggcccttgttcatcttcttcatcctgatc
tcagtgcggatgcactatccgcccttcgagcaacatgaatgccattttccaaacaaggcc
atgccctctgcgggtaccctgccctgggtacaaggcatcatctgtaacgccaacaacccc
tgtttccgcaatcctactcctggagagagtcctgcagtcgtgggaaacttcaatgactct
ataatctctcgtctgttcaccgatgccaaaaagatcctgctgtactctcagaacgataaa
agctacgagggctacaaggggctgctgagggccctcaggaagctgcagaagaacactgcc
agtttcaagttgaaggactttttgaaagacaatgagaccctttcccacttcctgcaccac
aatgcctcacttcctcgtcatgctttgaagcaaatagtggaggctgacgtcaatctggag
aaggtgctgactaaaggatttggcttccacctcagagacctctgtaacacaacgcagctg
gaggagtttgtccacattgctgaccgcaatgtgtcgcatatgactcaagaaattatctgc
aagtcctccagcgactggctcaacaaggcccagagccacttcctgtctaacctggacttt
ctcaaacccattcggaaggacgtgaagtcggaccctaaagtcgttcaggaggtctcagct
gcaaccgaccatcttctggagagcctgggagcactggctgtggagctcgctggtatgaac
agttggaaggacatgcgaaaggagatcctgtatctgactgcaaatgccacaggctctcca
aaccagatgtaccaggctgtgtcacgtatcgtctgcggacacccagagggaggtggcctc
aaaattaagtctctcaactggtacgaggacaacaactacaaggccctgtttggaaaccat
ggcaacgacagcgacagcgagcctctctcttcttacgataactcttccacaccttattgt
aacagcatgatgcggagcctggagtccagccccatttccaggatgatctggagagctctg
aagccactgcttatggggaagatcctgtacaccccggatacaccagcaacacagagaatc
atccatgaggttaataagaccttccaggagctcggagtcctgagagatcttggagggatg
tgggaggagatgagacccaaaatttggagcttcatggagaatagcgaagaaatggactta
gttaggaccctgctgcagaataacgccagcgctgcattcttcaacagccagctcagtgat
actgagtggcgcgtgtcagatgtgttcgatttcctgtccaagtcctcagaggaccacaga
cctgcaggatccgctttcacctggagagaggtcttcaacgagactgaccaggccatacag
accatctcacgcttcatggagtgtgtgaacctggacaagctggagcctgttgctaatgag
gagagactggtcaacaagtccatgggtctcctgaacaaccagaaattctgggcaggaatc
gtgtttcctgatatcacccatagcaacagcaccgacctgcctcccaatgtcaactacaag
atccgcatggacatcgataatgtggagaggacgaataaaattaaagacgggtattgggac
cctggtcccagagcagaccccttcgaggatctgcggtacatctggggcggattttcctac
ctgcaagatgttattgagcatggaatcatcagagctatcacaggctcaaaggagaggaca
ggcgtctacattcagcagatgccttacccctgttatgtcgatgacattttccttcgggtg
atgagtcggtcgatgcctctgttcatgaccttggcttggatgtactccgtggccatcatc
atcaagggcgttgtgtacgagaaggaggcacggctcaaggagaccatgaggatcatggga
ctgaataacggcactctgtggctcagctggttcatcagcagtttaatcccgctgctgatc
agcgccggcctgttggtcatgttgttgaagatgggcaacctgctgccgtacagtgatcca
ggtgtcgtgtttctgttcctgggatcgttcggcgtggtaaccatcatgcagtgcttcctc
atcagcaccctgttctctcgtgccaacctggctgcggcctgcgggggcatcatctacttc
actctctacctgccctatgtgctgtgtgttgcctggcaagactacgtcggctttggagcc
aaagttgttgtgagtttgctgtctcctgttgcttttgggttcggctgtgaatactttgcc
ctgtttgaggagcaaggcgtcggtatccagtggtcaaatctgctggccagccctctggag
gaagacagctacaacctgaccacctccatctgcctcatgctgtttgatgccgttctgtac
ggaataatgacctggtacttcgaagctgtgtttcctggtcagtatggtatccccagggct
tggtacttccctttcactaggacttactggtgtggagagaaacagaacagacacatctcc
acccctctgtcaaagaagggcaacactgaagcggtgtgtattgaggaggagccgagccac
atcgacccaggtgtttacattgagaatttggtaaaggtctacagccatgggaacaagctg
gccgtagatgaactgtccctgaggttctacgaaggacagatcacctccttcctgggacac
aacggagctggcaagaccacaactatgtcaatcctgacggggttgttcccgcccacttcc
ggtactgcctacatcctcggcaaggacatccgcactgagctcagcaccatccgacagaat
ctgggcgtctgtccacagcacaacgtacttttcagcatgctgacggttgaggaacacatc
tggttctacggccgtctgaaggggctcccggaggagaaggtgaaggctgagatggagcag
attgtgaacgatgttgggctgccgcacaagcgacagtcccgcaccagcaccttgtccggt
gggatgcagaggaagctgtcagtggccctggcttttgttggaggctcaaaggttgtgatt
ctggatgaaccgactgctggggttgatccttatgcacgtaggggcatctgggacttgctg
cttaaatacagacagggtcgcaccatcattctgtccacacatcacatggatgaggccgat
atcttgggcgaccgcatcgctatcatctcccatggcaaactgtgctgcgtaggctcctca
cttttcctgaagactcagctggggacaggctactacctgaccctggtcaagagagactac
gacctgacacttcagtcctgcaggaattctgccagcactgtctgctacaccaagaaaaca
gagaaagaggacagcgtatcagacagcagttctgatgctggtttgggcagcgaaccggag
agtgaaaccaccaccattgatgtatcccttatctcaaatgtgatattcaagcacgtcgca
gaggctcgcctggtggaggatctcggccatgaactcacatatgtcttgccctaccagtct
gctaaagacggagcctttgtggagctcttccatgagcttgacgaccgactgacagacctg
ggaatatccagctatggaatatctgacaccaccctggaagagattttcctgaaagtggct
gaggacagtggagtggactctgtcgagctttcagatggagtcgtaccaactaggactcgt
cgccatcacgccttcggagaccaccagagctgcctgaagcccttcactgaggacgacttt
gaattcaacgactctgaaggtgacccagagtcccgtgagaccgactggctcagtggaaca
gatggtaaaggttcataccaggtgaaaggctggagtctgaagagacagcagtttgttgca
ctgctctggaaacgattcctctatgctcgacgctccagaaaaggattctttgctcagatt
gttctgcctgcagtgtttgtgtgtatcgctctggtgttcagcctgatcgttcctccgttt
ggaaagtaccccagtctggctctggatcccagcatgtacggagaacagtttaccttcatc
agtaatgacatgcctgagaatgctcacaccaacaaactactggaagctctgatggaaaaa
ccaggatttggaacacgctgcatggaaggagaacccgcaacgaacatctcatgcactgca
gtagaggatgagtggtcaatcccacaagtctctcaaggtgtgaaggacatgttcgacaac
ggaaactggaccatggagaatccgtctccactgtgcgagtgcagctgcgaaggccgcaag
agaatgctgcccgagtgtccggctggtgctggcggacttccaccaccacatatgaagatc
agtgacaatgacacacttcagaatttgactggcagaaacatctcagactatctggttaaa
acctacgctcaaattattggaaagagcctgaagaacaagatttgggtcaacgagttcaga
tacggtggattctcactgggtgcccccggttctcagtttttgtccaacagagacgaaatc
gatgatgcgatcgctcatctgaggagacgcttccgcctggagaggggagcggcagctgat
cgtttctttcacagtctctccagttttgtccaaggattggacaccaagaataatgtcaag
atctggtttaacaacaagggctggcacagcatcggctccttcctcaacgtgatgaacaac
ggcatcctgcgagcaagtctgccagccggcaaagacccctcaaagtttggcatctccgcc
tacaatcacccactcaacctcaccaaggagcagctctcacaggtcgcattgatgacaacg
tcagtggacgtgttggtgtccatctgcgtcatctttgccatgtcctttgtcccggccagt
tttgtggttttcctcattcaggagagagtgaacaaggcaaaacacttgcagttcatcagt
ggagtgcagcctctcctctactggctggccaactttgtctgggatatgtgtaactacatc
gtcccagctacactggtcatcattatttttgtgtgtttccaacaagacgcctacgtctcc
tccactaatctgcctgtgctggctctgctgctgctgctctatgggtggtcgatcacccct
ctgatgtacccagcctcatttttctttaagatccccagcacagcctacgtggttctgacc
agcgtcaacatactgataggaatcaatggcagtgtctccacatttgtgctggagctgttc
ggcagcaatgagatcggtggcatcaacgacatcttgaagaacgtgtttctcatcttccca
cacttctgtctgggcagaggactgattgacatggtgaagaatcaggcaatggctgatgct
ttggagagatttggtgaaaaccggttccgttcacctctggcttgggacatggtgggaaag
aatctgtttgcgatggccatagagggcgtcatcttcttctgcattaccgtcctcattcag
tatcgcttctgcattaaggccagatcgtccaccagtcatctgaagcctattggagaagaa
gatgaggacgtggccagagagcgacagaggatcctgggtggaggaggacagaccgacatc
ctggagctcagacagctaaccaagatttacaaacggaaacagaagccagcagtggaccgg
ctgtgcgtcggcatcccccctggagagtgcttcggtttgctgggggtgaatggagcagga
aaaaccagcacctttaaaatgctgacaggagactctgtagtgaccggtggagaggcatac
ctggctggcaaaagtgtaacatcagagatcgatgaagtgcatcagaacatgggctactgt
ccccagtttgatgctatcaacgacctgctgactggcagagagcatctggagttttatgcc
atcctgagaggagtgcctgagaaggaagtctgcgaggtggcagagtggggcatccggaag
ctgggcctggtgaaatatgtggacaagtcagcaggcagctacagtggaggaaacatgagg
aaactgtcgactgccatcgctctaataggaggaccacctgtcgtgtttctggatgaacca
actacaggcatggaccctaaggcgcgtcgggccttatggaacaccatcctgagcatcatc
aaagagggacgatctgtagtcctcacctctcatagtatggaggagtgtgaggccctttgc
accaggatggccatcatggtcaacggcaggttccgctgtctgggcagcgtacagcacctc
aagaacagatttggcgatggctacaccatcatcctgcgggtggccgggccggacccagat
cttcggccagtgatggagttcatagagcaggagctcccaggcagcacgctgaaggagaag
caccgcaacatgctgcagtaccagctgtcctcatccctcacttccctcgcccgcattttc
tccctgctctccaagaacaaggaggcgctcagcatagaggactactcagtctctcagacc
actctagaccaagtgtttgtaaattttgccaaggaccaaagcgacgaggaccatttgaaa
gacatccatctgagcaagcgggacgctgtggtagtggacttttcccagctaaactccttt
ctcacggacaacaagactcgggagagctgcgtctga
DBGET
integrated database retrieval system
