Paralichthys olivaceus (Japanese flounder): 109627542
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Entry
109627542 CDS
T06037
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03410
Base excision repair
pov03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109627542 (poll)
03450 Non-homologous end-joining
109627542 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109627542 (poll)
Enzymes [BR:
pov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109627542 (poll)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109627542 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109627542 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT_2
BRCT
LIG3_BRCT
NTP_transf_2
Ribosomal_S21
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
109627542
NCBI-ProteinID:
XP_019939659
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MEARHGIMKAFPKVKRAKVLQGKDAPPLKKKADECNVTGDTFNGVTVYILPAGIGSARCQ
IFQRQIQQNGGQTESSLCPAVTHVVVDDNMDSDRALRLLKVDCMPSGVQLVKCTWLSMCI
NEKQLLDVANYSLLSSKRDPETQLENVKEELPSVNPSAIVEPMSHQTKQEETINMTGPET
KDELQAEEDGVSHSDMEALITGQHPKEEMPGPSLDPGPDSVAQKAASGKWVCAQSSQSKS
NNFNKHITDKLEVLAKAYTHQGDKWRALGYSKAVNALKSYHKPITSYQEACQIPGIGKRM
ADKIDEIMESGHLRKIDHIGEAVPVLELFTNIWGAGAKTAQLWYQQGFRTLEDISTKAHL
SNTQKIGLKHYDDFLDRMPREEAGAIEKVVRDAAHAIDPGLVAMACGSYRRGKATCGDVD
VLITHPDGRSHKGIFSKVLQSLHDSGFLTDDLVSHEENGEQKKYMGVCRLPGHGHRHRRL
DIIVVPYSEFACALMYFTGSAHFNRSMRAMAKTKNMSLCEHSLNEAVVRQGTLKLYGGTP
LPTPTEKDVFNLLGIPYREPNERDW
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcgtcatgggatcatgaaggctttccccaaagttaaaagggccaaagtacta
cagggaaaggatgcaccaccgctgaagaagaaggcggatgaatgcaatgttacaggagac
acttttaatggagtcacagtgtacatcctgcctgctggaattggaagtgccagatgtcag
atttttcaaagacaaattcagcagaatggaggacagacggagagttcactgtgtcccgct
gtcactcatgttgttgtagatgacaacatggacagtgacagggctctgcgcctactgaaa
gtggattgtatgccctctggagtccaactggtgaaatgcacttggttgagcatgtgcatc
aatgagaaacaactcttggatgtagccaactacagtcttctttcatccaagagggatcct
gaaactcaacttgaaaatgttaaagaagagttgccgagtgtcaacccttcagctattgtt
gaaccaatgtctcatcaaaccaagcaagaggagactataaacatgactggaccagaaacc
aaagatgaattgcaagcagaagaagatggcgtctctcacagtgacatggaagcgctcatc
actggccagcaccccaaagaggagatgcctggccccagcctcgaccccggtccggactct
gtggctcagaaggcagcctcaggaaagtgggtctgtgcccagtcctctcaatccaaaagt
aataacttcaacaagcacatcacagacaaactagaagtgctggccaaggcctacacacac
cagggggacaagtggagggcgctgggctactccaaggctgtcaacgcactgaagagttac
cacaagcctattacatcatatcaggaggcttgtcaaattcccggaatcggaaaacgaatg
gcggacaaaatcgatgagattatggagagtggacatctccggaagattgatcacattggg
gaggctgtgccagtactggagcttttcactaacatttggggtgcgggagctaaaactgca
caactgtggtaccaacagggatttcgcactttggaggacatcagcacaaaagcccacctg
agcaacactcagaaaataggactcaagcactacgatgactttctggaccgtatgccccga
gaagaagcaggagccatagagaaagtggtgagagatgccgcccatgctatagacccagga
ctggtggcgatggcctgtggctcctaccgtcggggaaaagccacatgtggagatgtagac
gtactcattactcacccagatggcaggtcacacaaggggattttcagcaaagtgttacag
agcctccatgacagtgggtttttgacagacgacctggtgagccacgaggagaatggagag
cagaagaaatacatgggtgtgtgccgtttgccaggacatggccaccgccatcgcaggctg
gacatcatcgtcgtgccctacagcgagttcgcctgtgctctcatgtatttcaccgggtcg
gcacacttcaaccgctcaatgagagccatggcaaagacgaaaaacatgagtttatgtgag
cactcgctgaacgaagctgtggtgcgtcagggaactttaaagttgtatggcggcactccg
cttcctacaccgacagagaaggatgttttcaatcttttaggcataccgtacagggagccc
aatgaaagggactggtga
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integrated database retrieval system
