Paralichthys olivaceus (Japanese flounder): 109627682
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Entry
109627682 CDS
T06037
Name
(RefSeq) rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109627682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109627682
Membrane trafficking [BR:
pov04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109627682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
C2_GRDP
Motif
Other DBs
NCBI-GeneID:
109627682
NCBI-ProteinID:
XP_019939973
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAEM
PEWSEECCFELLPGILEEGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQTIIPLDQIFQE
AMCPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRFAALSGNLGQPFGEEGGGVVVRESRDVAEEKRSKVKDFFKGK
LRKSSDTRSCSSLASDSSLSSMASDNPGPPPSLDLLSDPPSSPIYTSKVRVDAHYGEADL
AKKVLTSQHTTKVLTHKRALSDEASKITTAFSRSNLAMESLRGQTMTQSKSSLCINGSHV
YDSEPSTPKSTGALPSKLVLLEKCSPLSRSLQNLTKRSEDKGSFADGRRWSFDKTRKEEE
KEARASFLPTQQAQSDGRTTQAATPVVSSASGSPEKGRKLRKTLFSGGRSESLPAKSDLN
QAASSSEGRLRGWFGSSDSQNKPRLEVSPKVESSSDVPPPLSPHSPARPQCSSPSDHVSP
DDRTHSRPLTPSTSPSSAPISPSNPFLSHMQRNPFFEELLAEESQRSPPLAPSSGLSPFH
YTTLPCTPSPAHDAHVTKMASIKRERPRPVGRQISLPALLPKAAAPNSHNHSASRSMSES
TGEWDDFFDALASSRLNSPKGSLPQKRLRTSPSSDSCSYAVNNHAQGLQMCEEQPPPLPP
RRFLRTSLSEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQRGREGECKRNGSSPDPQTS
SETSDSPSVNSQQRTDATSPGCVPEEKLKKFKYEPLEDDADCWGGMLFEQDLYGRMCRGN
YGKLTVNNHRLSLNAEERDGTDITFKISAPETILDGEISVKDVTNLSTTTSPDPDVKMDG
PSAPVEEAAESYANETSINNNVSFLLTSGDLNMNVNNSDFTFIDSDGSSQSEVLDTLKGV
SSLGAISPQPTEDSLTVYHEETTPEDLFTLKDTYIPEMNSSFEIIAPSKRCRVSPVRQDC
HWELNHLAPCGQSRVNDSRETSALSSQNQTSSDLHVESRDDKKRNNGNFEKTQKDADDNG
NPQAQLASHKQTEVFSGVVSARFRPKGLSRQSSCGSPSSHSQSGDREFEQLLSLVQNISQ
AGDRPSSYQPSKSSTDLPVNSTSRPKTSKVNKMSLLTKYCVTGIPSEISFEDLHAKVAPS
SRSPSEPDPSSLSIPSATPLSNAITTADDTQAKLHPSPVCYPPIHSSSTGPGAGASTTLV
VAPYTSTSSFSTTYATDRPLVDARHSLFPEETQPANNLPRQESRPHPVKPLTSSQSEKKE
GRSVLEKLKSTIHPGRGAAHQVAAEAERSQEVTVDNSAQYQHLTNMELISLLLQQEMDMQ
KQQAASERQEAQLGKCEAELKKVKLQVRDLEDYIDNLLLRIMEQTPTLLQVRTRHK
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactgatcgatctggacgacgatcagcgctgggtcccgactcacgtgaatgtc
accgtgctccgggcgagaggactgcgcaccaagggcaagcacggcagccgctacctgtac
accatcatccaggtggggaaggagaagtacaccaccgggctggtggagaaggcggagatg
cccgagtggagcgaggagtgctgcttcgagctgctgcccgggatcctggaggagggcggc
cgcagcgcgtacccgccgggcagcggggacctggtgctcaccgtcatgcaccgggtgctg
atcggactggacgtgttcctcggtcaaaccatcatcccgctggaccagatcttccaggag
gccatgtgtcccagagacgaatggttcaagctcaactctaaagcaggaaggaaggagaag
gaacgtggtgaacttcaggtgacggtgcagttcacccgcaacaacatgacagccagtatg
ttcgacctcaccatgaaggacaaacctcgctctgcttttgggaagctgaaggatcgcgtc
acggggaggaagaggggggatgtggagtcctcctcggccatcgtgccgggccgcttcgcc
gcgctgtccggaaacttggggcagcccttcggagaggagggcggaggagtggtggtgagg
gagtctcgagatgtagcagaggagaagaggagcaaggtgaaagatttcttcaaagggaag
ctgcgcaagtcgtccgacaccaggtcgtgctcatcgctggcttcagatagcagtttgtct
tccatggccagtgacaaccccggccccccacccagtctggatctgctgtcggaccccccc
agctcgcccatctacacgagcaaagtgagagtggacgcccactatggagaggcagactta
gctaaaaaagtgctcaccagtcagcacaccacaaaggttctcacacacaagcgagccttg
agcgacgaagccagcaaaatcacaacggccttctctcgatcaaatctagcgatggagtct
ctcaggggtcagaccatgactcagtccaagtcgtccttgtgtataaacggaagtcacgtc
tacgactccgagccgtcgactccaaagagcacgggagcgctgccgtccaaactggtgctg
ctggagaagtgctccccgctgtctcgctccctgcagaacctcaccaagaggagcgaggac
aagggctcctttgccgatggccgccgctggtccttcgacaagacgcggaaagaggaagaa
aaggaggctcgggcgtcatttcttccaactcagcaagctcagtccgacggtcgcaccacg
caggcggcgacaccggttgtctcatctgcgtccggttcacctgaaaaagggaggaagctg
aggaagacgttgttctctggagggaggagtgagtctcttccggctaagtcggacctgaac
caggctgcttcatcatcggaggggaggctcagaggctggtttggctccagtgactcccag
aacaagccgaggctggaagtttctcctaaggtagaaagcagctcagacgtaccccctccc
ctctctcctcactcccctgcccgcccgcagtgctcctctccctctgatcacgtctcaccc
gacgatcgcactcactctcgcccgctcactccctccacctcaccctcctctgctcccatc
tccccctccaaccctttcctctcccatatgcagcgcaaccccttctttgaggagctccta
gccgaggagtcgcagaggtcccctcctcttgcaccttcctccggtttgtcccccttccat
tacaccactctgccctgcacacccagccccgctcacgatgctcatgttaccaagatggct
tccattaagcgggagcgacccaggccggtgggcagacagatatctctccctgcgttgtta
ccaaaagcagctgcaccgaactcccataaccactcagcctctcgctccatgtccgagagc
acaggagagtgggatgacttttttgatgctcttgcctcgagcaggctgaactcgcctaaa
ggaagtcttcctcagaaacggctgagaaccagcccatcatctgattcatgtagctatgca
gttaataatcatgcacaagggctgcagatgtgtgaagagcagcctccgcctttgcctccg
aggaggtttttaagaacttcactcagtgagatttactctgacggctggctgcacagaggt
caggagctggccgtccacaaagaagcctacctcctctcacagaccggcgtggcctcgctt
cagcgtggacgagagggcgagtgcaagagaaacggttcatctccggaccctcagacaagc
agcgagacctccgactcccccagcgttaactcccagcagcgcacagacgccacgtcaccg
ggatgcgtccccgaagagaagctgaaaaagttcaaatacgagcctttggaagacgacgct
gactgctggggagggatgctgttcgagcaagatctgtacggacgcatgtgcagagggaac
tacggaaaactcacagtgaacaatcatcgtttgtcattgaacgctgaggaacgtgatggg
actgacatcacatttaagatctctgcacctgaaacgatccttgacggtgaaatatctgtg
aaagacgtcacgaacttgtcaactacaacttcccctgacccagacgtaaagatggatggt
ccctctgctccagtagaggaagcagcagagtcttatgcaaatgaaacgagcatcaacaac
aatgtgtctttcttgttaacgtcaggagacctgaacatgaatgtgaacaactcagacttt
acttttattgactctgacggctcctctcaatctgaggtgctggatactctcaaaggtgtc
agtagtttaggagccatttccccacaaccgacagaagattcactgactgtttaccacgag
gagacgacacctgaggatttattcactttaaaggacacctacatacctgagatgaactct
tcgtttgaaataatcgctcccagtaaacgatgcagagtgtctccagttcgccaggactgt
cactgggagctgaatcacttggcaccatgtggtcagtccagggtgaacgacagcagagag
acgtctgcgctgtcgtcacaaaatcaaacatcatccgatcttcacgtggaatccagagac
gacaaaaaaagaaataacggtaattttgaaaagactcaaaaggacgctgatgataatggt
aacccgcaggctcagctggcctcacataagcagaccgaggtgttttcaggagtggtcagc
gcacgtttcagaccgaaaggtttgtcccgccagagcagctgcggcagcccgagcagccac
agccaaagtggagacagagagtttgaacagttgttgtctctcgttcaaaacatctcacaa
gcaggtgacagaccttcgtcgtatcaacccagtaaatcttccacagatttgcctgtaaat
agcaccagtcggccgaaaacatcaaaagtcaacaaaatgtccctcctcacaaaatactgt
gtcacaggtattccctctgagatcagtttcgaagacctccacgcaaaagtagcaccgagc
tcaagatccccttctgagccggatccctcttctctctccatcccctccgcaacgcccctg
tccaacgccattaccactgccgatgacacacaggctaagctccacccctcccctgtctgt
tacccccccatacattcctcaagcacggggcccggtgctggagccagcactactctggtt
gtggccccctacacctccacttcctccttctctaccacctacgccactgaccggcccctg
gtcgatgcacgccactcactttttcctgaggagacacagccagctaacaacctgccccgt
caggagagcagacctcacccagtgaaaccattaacctccagccaatcagagaagaaggag
gggcgttcggttctggagaagctcaagtccacaatccaccctggacgcggcgccgcccac
caggtcgcagccgaagctgagcggagtcaggaggtgaccgtggacaactcagctcagtac
cagcacctgaccaacatggagctgatctccctgctgctgcagcaggagatggacatgcag
aagcagcaggcggcctccgagcggcaggaggcgcagctggggaaatgtgaggccgagctg
aaaaaggtcaagttacaggtgcgagacctggaggactacatcgataatcttttactgcgg
atcatggagcaaacgcccacgttgctccaagtgcgaaccagacacaagtga
DBGET
integrated database retrieval system
