Paralichthys olivaceus (Japanese flounder): 109628034
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Entry
109628034 CDS
T06037
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04136
Autophagy - other
pov04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109628034 (atg2b)
04136 Autophagy - other
109628034 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109628034 (atg2b)
03029 Mitochondrial biogenesis [BR:
pov03029
]
109628034 (atg2b)
Membrane trafficking [BR:
pov04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109628034 (atg2b)
Mitochondrial biogenesis [BR:
pov03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109628034 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
109628034
NCBI-ProteinID:
XP_019940450
LinkDB
All DBs
Position
Unknown
AA seq
2072 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGTLAQVPLDKWSLNELL
ETADAPVEVMAGFIQTISLTVPWAALLQENCALEVKGLEMVLRPRPRVASGTEPMYWSSF
MTSSMQLAKECLSQKLTDDMGESFQPFEGLEKFAETIETVLRRVKVTFLDTVLRVEHIPE
NSKTGIALEIRINKIVYCDETGEESSSVNVHQPTTFAHKNLQMEGITIFWDEFSDASRAG
CKSSPTPTETEPKLSPSWNPRIICEPHPQFTEPVSSTTPFEPVQVGSLDGRIELSLTLKN
NLAMPGAKLDVVGHIDTLIFLLSPRQVHLLLDLFGAFSGGSAQEWAKDRKSRPIQQEDEY
RLHMELNRCLKKDNVVPGADPDLIESQTTRTVSSRDDVFFSMADMDMSHSLSSLPPLGEP
PTVDLDLSLNSNYSASPGESPSGNATALWDDYMDVPRQREKQANETLHQSRDSQLAQKLL
RLASHPSKPHGDESRPELVLRLTLSSLAVSVLHIDPLPPPDAAPRALGPMAAHFFSMVGQ
LSPASFLQSRTALNQACPHDHLRFVGQDLKINYEHSQGSNLRTFSTDVSLNQMELLECLF
PSEAVIGGSQRGIQYTELLTFDTTASADASLTTCLHLLYKQAERRGPQGGQVRFSTIPRK
AEIQVELGPVRSELDISIVDRLNSLLQPQKLATTEMMASHMYTSYNKHVSLHKAFTEVFL
DDSHTPTNCQVSLTVNAPVLGLAVRFPIPDLRSDQERGPWFKKSLQKEVLYLEFEDLEVK
TEFMGGSCPDQTKMELTFRELVGKFQEEPDQPAARFLRVSHTMDGNMTSSESVKFDWPRV
VLKMNPTAVHSILERVTTEDDEGAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFSSRRV
MYENEEMVIPGDVGEMTEFQEKTMNNSRFILELCLPNVQLVLPSKTFYEKLHNRINNDLL
LWEPTAPSPVETVESMPYGVGLSVASQLINTYSKDSFSQFRSTGPEEDTSGSEEENMHYY
SPASDVGLRSRKKKKPKAQSKTSQSLFSVILSVNHGLVSLQTNAKRENKTVLKNKHGEFW
LEVKNAVLFSVTQYEGYKDQHYICFHTSSICMYHQGLMDGGAVVSDIKLPCRTHPHWLEP
TIYQSETSPERSSTPSESIGLEARSMVSVAVKISSQSAERNVKEFLVAVGVRGATLQHRV
VPLSLGWYDQIVDFLNISDEPVLGYAPPTSVTTLHLHLWSCSLDYRPLYLPLRSLLIVET
FSISSSLSLDHSSSTLRIILDEAALFLSDKSNAVSVNLARDYVQVVDMGTLELRITAVKP
GADGKLVEPRFELRCSSDVIHIRTCSDSCAALMNLIQYVASYGDLLPPAEPEAKHSSSTQ
RSKAEFPSRPTSQTPLLAETEQQMLQDLMSEAMEETDGQHTPGIQQNGAHEERNHDHDPP
HSDLFLFPDESGNFNQNPSPTYPMLHSPLITPVPNLTQETDDFCILETPGSRGEDRDQEP
VVKRLTSNPVEIKQDHFSQPLYGNDSSRGAVNFPIPEVRYLIKEISVIWHLYGGKDFGSL
TFSASPARSRGSTPHCSPSQTPVRQASASGRAGGGKGRNHDVLMEIQLSKVRFQHEVYPQ
AQVASGSAADQPVSRQVFVVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNMLTVKAL
HMCPESGQAPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLATEVEFFSPPAQEAFCVST
KKAAAPEISCSFSKLAGSSQDPAPIISVPAQRRLSHNGFSTSGREEASDSDTLSFKDQPI
FFREFRFTSEVPIRLDYHGKHVSMEQGTFAGIIIGLTQLNCSELKLRQLCYRQGLLGVDK
LFSYAINEWLNDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKDGRIVRGFQ
RGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERDSKRIKRFSHYGLAHQP
VDLREGVAKAYTVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVVKPLIMA
TEATSNVLGGMRNQIHPDARQEESQKWRQGEE
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgccttggcccttctcagagtccatcaagaagcgagcgtgcaggtacctcctgcaccgg
tatcttggcaactttctgcaggagaagctgagcttggatcaacttagtttggacctctat
caaggcactggaacacttgcccaagtgccattggataaatggtctctcaatgagctgcta
gagacggcagacgcccctgttgaagtgatggccgggttcatccagacaatttccctaacg
gttccatgggctgccctgctacaggaaaactgtgcgctagaggtcaagggtttggagatg
gtgctcagacccaggccgagagtggcatctggcactgagcccatgtactggtccagtttc
atgacgagcagcatgcagctcgccaaggaatgtcttagccagaaactcactgatgatatg
ggagagagcttccagccttttgagggattggagaagtttgcagaaacgatagagacagtc
ctgagaagggtcaaagtgacatttttggacactgtcctcagagtcgaacacattccggag
aattctaaaactggaattgctcttgagatacgaattaacaagattgtttactgtgatgaa
acgggcgaggagagttcgagtgtgaatgtgcatcagccaaccacatttgcgcataagaac
ctgcagatggaaggcatcaccatattttgggatgaattttcagacgcttctcgagctgga
tgtaaatcatcaccaactccaacggaaactgagccaaagctctcccccagctggaatccc
agaataatatgtgagcctcacccccagttcacggagcctgtatcctctacaacaccattt
gaacctgtgcaggttgggagccttgacggcagaatcgagttgtccctcaccctgaaaaac
aacctagcaatgcctggagcaaagctggatgttgtcggacatatagatacattaattttc
ctattgtccccacggcaagttcatctcctcctggacttgtttggagcgttctctggtgga
agtgcacaggaatgggctaaggacagaaagagtcgaccaatacagcaggaagatgagtat
cggctccatatggagctgaaccgctgtctgaagaaggacaatgttgtgccaggagcagac
cccgacctcattgaaagtcagacaaccagaactgtgtcaagtcgagatgatgtgttcttc
tccatggccgacatggacatgtctcacagtttgtcatccctccctcctctgggagaacca
cccactgttgacttggatttgtcacttaacagcaactactctgcctccccaggagagtct
ccctctggaaacgcaacagctctgtgggatgattacatggatgtaccaagacaaagagag
aagcaggctaatgaaacacttcaccagtcacgggattcacaactcgctcaaaagttgcta
agactggcctcccatccatctaaacctcatggtgatgagtccaggccagagctggtgctg
aggctgacactgagcagcctggctgtctctgtcctccacatcgacccgctgccaccacca
gatgctgcccctcgggcactcggccccatggctgcacacttcttcagcatggtgggccag
ctctctcctgcttctttcctccagtcccggacagcattgaatcaggcttgtcctcatgac
cacctcaggtttgtgggccaggatctgaagataaactatgagcacagtcagggatccaac
ttacggactttcagcactgacgtctctctcaaccagatggaactcctggagtgtctgttc
ccatctgaggctgtcattggaggctcccaaagaggcattcagtacactgagctcctgaca
tttgacaccacagccagtgctgatgcatcgctaaccacctgccttcacctgctttacaaa
caggctgagcgcaggggccctcagggcggccaggttcgcttcagcaccattccccggaaa
gctgagatccaggtcgagctgggacctgtgcgatccgagctggacatcagcatcgtcgac
cgtctcaactcactgctacaacctcagaagctggccactacagagatgatggcttcccat
atgtatacatcttataataaacatgtcagcttgcacaaggcttttacagaagttttcctc
gatgacagccacaccccaaccaactgtcaggtatcactgactgtaaatgccccagtgctc
ggccttgcagtccgatttcccatccccgacctgcgctcagatcaggagaggggcccctgg
ttcaagaagtccctgcagaaggaagtactttacctggagtttgaagacctggaagttaaa
acagagttcatgggtggcagctgtcctgaccaaacaaagatggagctcacttttagagaa
cttgtagggaagttccaggaggagccagatcaaccagccgcccgattcctcagggtgtcc
cacaccatggacggaaacatgacatcatccgaaagcgttaagtttgactggccgagggtt
gtgctgaagatgaaccctacggcggtccactcaatccttgagcgtgtgacaactgaggat
gacgagggggctgaggatcattctcttgaggaggaagaggaggaaggggctgctcattca
ctgaaggatgtgtgtgactttgggaaaccagagccatcaccattttcttcacgtagggtc
atgtatgagaatgaggagatggtcattccgggtgatgttggtgagatgacagagtttcag
gaaaaaaccatgaacaactctcgcttcatccttgagttgtgtctccctaatgtgcagttg
gtgctgcccagcaagacgttttatgaaaaactacacaacaggataaataatgacctgctt
ctctgggagcccactgctccatctccagtggagactgttgagagcatgccatatggagtt
ggcctctctgtcgccagtcaattgatcaacacttactccaaggacagcttcagccagttc
cgctctactggacctgaggaggacaccagcggctcagaggaagagaacatgcactattac
tctcctgcctctgacgtgggcctcaggtctcgtaagaagaaaaagcccaaagctcagagc
aagacgtcgcagagtttgttttctgtcatcctcagtgtcaatcatggcttggtgtctcta
caaactaatgctaagagagaaaataaaactgttctgaaaaacaaacatggcgagttctgg
ctggaggtgaagaacgctgtgctgttcagtgtcacgcagtatgagggatataaagaccaa
cactatatttgcttccacaccagtagcatttgcatgtatcaccaaggactcatggatggc
ggagccgttgtctcagacatcaagttgccgtgcaggacacatccccattggttagagcca
actatctaccaatcagagacctctcctgagaggtcctcaacaccctcagagagtattggt
ctggaggcccgcagcatggtgtctgtcgctgtcaaaatctcttcacagagtgcagaacgc
aacgtcaaggagtttctggttgctgtcggagtgagaggagcaacacttcagcacagagtt
gtccctctcagtctgggctggtacgaccagattgttgacttcttgaatatttctgatgag
cctgtgttgggttacgctcctccaacgtctgtcaccaccctacatctacatctatggagc
tgctctttagattacagacccctttacctgccgctcaggtccctgctgattgtcgagact
ttcagcatctccagcagcctctctttagaccactcctcttcaacactcaggatcattctg
gacgaagctgctctgttcctctcagacaagagcaatgcagtctctgttaatctagcacgt
gactacgtccaagtggtcgacatgggaacactggagctgaggattacagctgtcaaacct
ggagcggatggaaaattggtggagccgagatttgagctgcgctgctccagtgacgtcatt
cacatcagaacctgttcagattcctgcgccgccctcatgaacctcatccagtacgtcgcc
agctatggagacttgctgccgcctgcagaaccagaggcaaagcatagcagcagtactcaa
agatccaaggcggagtttcccagccggcccacatctcagacccctctgcttgctgagacc
gagcagcagatgttgcaggatctgatgagtgaggcgatggaggagacagatgggcagcat
acacctgggatacagcagaacggtgcacacgaggagagaaatcatgaccacgacccgcct
cactcagacttgttcctgttcccagatgagagtgggaattttaatcagaatcccagcccc
acttaccccatgcttcactctcctctcatcactcctgtcccgaacctgacccaagagacg
gatgacttttgtatcctggaaacacctggttccagaggagaggatcgtgatcaggagcca
gtggtaaagcggcttacttcaaacccagtggaaattaaacaggatcacttcagtcagcct
ctgtatgggaacgattccagtcgcggagctgtgaactttcccatcccagaggtgcgttac
ctcatcaaggagatctctgttatctggcacctttatggtgggaaagactttgggagtctg
actttctcagcgtctcctgctagaagccgcgggtctacacctcattgctccccctctcaa
actccagtcagacaggccagtgcttcaggacgggcaggaggtggaaaagggaggaaccat
gatgtcctgatggagatccagctcagcaaggtgagatttcaacatgaggtgtacccacag
gcccaggtggcttctgggtcggcagcggatcagccagtctctcggcaggtgtttgtcgtg
caggacttggagattcgagaccgacttgcaacttcacagatgaataagttcctctacttg
tactcaagcaaagaaatgccccgcaaggcccattctaacatgttgacagttaaagcactg
cacatgtgtccggagtcggggcaggctcctcaggagtgctgtctgcgtgtttccctgatg
cctcttcgtctcaatattgatcaggacgcactattcttcttgaaggacttctttacaagt
cttgctactgaagttgagtttttctcaccacctgctcaagaagcgttctgtgtttccaca
aagaaagccgctgcccctgagatctcctgcagcttctccaagctcgctggcagcagccag
gacccggcaccgatcatttcagtgcctgcacagagacgtttgagccacaatgggttttct
acatctgggagggaagaggccagtgacagtgacactctttctttcaaagaccagccaatc
ttctttcgggagttccgatttacgtctgaggttccaattcgcttggattaccatgggaaa
catgtttcaatggaacagggaacatttgctggaatcattatcgggttgacacaactgaac
tgttcagagctgaaactgagacagttgtgctacagacaaggactgttaggtgtggataag
ctgttttcctatgcaataaacgagtggctgaatgacataaagaagaatcagcttccaggt
ctgctgggtggtgtcggaccaattcactcactggtacagttggttcaaggattcagggac
ttggtctggctcccgatcgagcagtacaggaaagacggccggatagtccgcgggtttcag
cgcggcacagcctcctttggaacctccactgctatggctgctctggagctcaccaacagg
atggtgcggactattcaggcagcagcagagacggcctacgacatggtttctccagtgcct
gatgagagagactcaaagaggataaaacggttctctcattacggactggcccatcagcct
gtggacctgagagaaggtgtagccaaagcctacacggtggtaaaagaggggatcacagac
actgcactgaccatctacgacacggccacccgggagcacgagcagcgcgggatgacgggg
gcggtgggtggagttctccgacagctgccgccagctgtagtcaagcctctcattatggcc
accgaggccacctccaacgttttgggtgggatgaggaaccagattcaccctgacgctcgc
caggaggaatcgcagaagtggaggcagggcgaggagtga
DBGET
integrated database retrieval system
