Paralichthys olivaceus (Japanese flounder): 109628036
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Entry
109628036 CDS
T06037
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109628036
Spliceosome [BR:
pov03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109628036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_2
TPR_12
TPR_11
TPR_16
TPR_MalT
Mad3_BUB1_I
HrpB1_HrpK
TPR_21
ARM_TT21_N
Ras_bdg_2
ARM_TT21_4th
GAT
Motif
Other DBs
NCBI-GeneID:
109628036
NCBI-ProteinID:
XP_019940465
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MDDVSETLFIMAAEGGEELSGNGELEESPAMEASEVPAPPPFEMADTSEENGSATVAPEA
PVDLDPSSFSMPLAGEDEEGELPADFERLWKVTQDCPQDFTSWTDLLQYCEQESHITASR
RALVAFLTHYPLCYGYWKKFTDLERRAGYNSKAEEVCIQGLQAIPLSVDLWIHYINLLLG
TLDMNLAESPKRIRSVFEDAIAAAGLDFHSDRLWDLYVEWEKEQGNMKNAAAILDRVLKV
PTQLYNTHYDKFKEHLNSHEPKEVLSPEEYDELRTLCRQSQKAERAEQAQEEEAERPPGE
EEPATPEGTDTEELIQKIREQVLLRRDKVYQDNEGEVRQRWHFEDAIKRPYFHVKSLDRH
QLRAWHSYLDWEIAQLNKDTKDPDQDPNQASTEGSEVTAQPNEVSEEASVAQDDHRVRIL
SERCLIACALYEEFWMRYIQYLEPQSVDEARAVFKRACEIHLTHKPNIHMQWATFEERHG
DLTEARRVLEALENNLPGLAVVCLRRAALERRAGNLDQSEALLQEAVAGSKEKPTLHAFY
SIKLARLLLKLGRNPSKARRVLQEALEISPDNDKLHLNLLELEVSGDPWASAEAVQECVT
RALAAPLATHTKILFSQRGLQFAEDYSNSIESVLSVYEEHQKLMKELGGTKRGAENGDED
SEKLDKGEDDSTVAVSAQVPPTVPHVPITTPPPPVMGTDMSAQAGYGGYGNWYQQSQYSS
YGYQNTWNYNQGYYPPS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtcagcgagacgttgttcatcatggcggcggaaggcggcgaagagctgagc
ggcaacggggagctcgaggagtctccagccatggaggcctctgaggttcccgcgccgcct
ccatttgagatggctgatacgtcagaagagaacggcagtgccactgtggcccctgaggct
cctgtggacctcgacccttcttccttctccatgcctctggctggggaggatgaggagggg
gaactgcctgctgacttcgagcgtctgtggaaggtcacccaagactgtcctcaagacttc
accagctggaccgacctgctgcaatactgtgagcaagagagtcacatcacagcgtcacgc
agagcgctggtggcattcctcactcactacccgctctgttacggctactggaagaaattt
actgatctggagcgccgtgcaggctacaacagcaaagcagaggaggtgtgtattcagggt
cttcaggcaatccctctaagtgtagatctgtggatccactacatcaatctgttgctggga
acactggacatgaacctggccgagtcaccaaagcggattcgcagtgtttttgaggatgcg
atcgcggcagcaggtctggacttccactcagaccggctttgggatctgtatgttgagtgg
gagaaggagcaggggaacatgaagaatgcagcagccatcctggacagagtcctcaaagtc
cccacccaactctacaacacacactacgacaagttcaaggagcacctgaacagccatgag
cccaaagaggtgctttccccggaggagtacgatgagctgaggacgttgtgccgtcagagt
cagaaggcagagcgcgctgagcaagcccaggaggaggaggcggagaggccgccgggggag
gaagagccggccacacctgagggcacagacactgaggaactgatacagaagatcagggaa
caagtgctgcttcgcagggacaaagtgtaccaggacaacgaaggagaggttcgccaaaga
tggcactttgaagatgctatcaagcggccgtacttccacgtcaagtcacttgaccgtcat
cagctgcgagcctggcactcatacctggactgggagatcgctcagctgaacaaggacacc
aaagaccccgaccaagatccaaatcaggcatccacagaggggtcagaggtcacggctcag
cctaatgaagtgtcagaggaagcttcagtcgcccaagatgaccacagggttcgcatcctg
tctgagcgatgtctcatcgcttgtgctctgtatgaagagttctggatgaggtacattcag
tacctggagcctcagagtgttgatgaagctcgagctgtcttcaaacgagcctgtgagatt
cacctgacgcacaaacccaacatccacatgcagtgggccacctttgaggagaggcacggt
gatttaaccgaggctcggcgagtgctggaggccctggagaacaatctgccggggttggcg
gtggtctgtctccgccgggctgctctggagagacgagcaggcaacctggaccaatcagag
gccttgttacaggaggcggtggctggatccaaagagaagcccacgttgcacgctttctac
tccatcaagctggctcgtctgctactgaaactgggcaggaaccccagcaaagcccgcaga
gttttacaggaggcgctggagattagtccggataatgataaactgcacttgaacctgttg
gagctggaggtgtccggggacccctgggcctcagcggaggcggtgcaggagtgtgtgaca
agagctcttgcagctcctctcgccacacacaccaagatcctcttctcacagagaggtctg
cagtttgcagaggactacagcaactctattgagagtgtgttgtctgtctatgaggagcat
cagaaactgatgaaggagctcggtggaacaaagagaggagcagaaaatggggatgaggat
tcagagaaacttgacaaaggcgaggacgactccactgttgccgtgtccgcacaagtcccg
cctactgtgccgcacgtccccatcaccacaccccctcctcctgtgatgggcaccgacatg
agcgcacaggccggctatggaggatacggcaactggtaccagcaatcgcagtacagcagc
tacggttatcagaacacctggaactacaaccagggctactatcctcccagctaa
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