Paralichthys olivaceus (Japanese flounder): 109628049
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Entry
109628049 CDS
T06037
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03022
Basal transcription factors
pov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109628049 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
109628049 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109628049 (mnat1)
03400 DNA repair and recombination proteins [BR:
pov03400
]
109628049 (mnat1)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109628049 (mnat1)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109628049 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
Xol-1_N
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
109628049
NCBI-ProteinID:
XP_019940480
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MKMDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNF
RVQLFEDPTVDKEVEIRKKVLKIYNKREFDFPGLREYNDYLEQLEDIVYNLTNNIDVEDT
KLRMEQYQRENRDLIQKNKATLTREQEELEELLLLEQQGNEQRRLDVLQEEQRQLNAKRK
NKQALLDELEQSQLPATILLAQHKVRAAQLETQIEHQKQTVKPTNLFSTGIHMRQTVSLL
AVPKIEEVLYHYQPVQLETYGPPVPELEQLGRVGYLNHVRAAMPQDTAGGYSSALACHRA
VQDAFSGLFPSKG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacgaccagggctgtcccaggtgtaaaaccaccaaatacaggaacccgtct
ctgaagctgatggtgaacgtgtgcggacacacactatgcgagaactgtgtggagatgctg
tttgtgcgtggctcgggtaactgtgtgcagtgtgacacgcccctgaggaagagcaacttc
cgcgtgcagctcttcgaagaccccactgtagataaggaggtggagatccgaaagaaggtg
ctgaagatatacaacaagagagagtttgacttccctggcctgagagagtataatgactac
ctggagcaactggaggacatagtgtataacctgacaaacaacatcgatgtggaagacacc
aagctaaggatggagcagtaccagagggagaacagagatctcatacagaagaataaggcc
acacttactcgagagcaggaggagctggaggagctgctgttgctggagcagcagggcaac
gagcagcggagactggatgtgctgcaggaggagcagaggcagctgaatgccaagaggaaa
aacaagcaggcactgctggatgaactggagcagtctcaacttcctgctaccatcttgctt
gcgcaacacaaggtccgcgctgcccagctggagacccagatagagcaccagaaacagacg
gtcaaacctacaaatctattttcaactggaatccatatgcgtcagactgtgtctctactg
gctgtgccaaagatagaggaagtcctgtaccactaccagcctgttcaactagaaacctac
ggacccccggttcctgaactggagcagctgggcagagtcgggtatctgaaccacgtgcgg
gctgccatgcctcaggacacagctggaggatacagctcagctctggcgtgtcatcgagcc
gtccaggatgcgttcagcgggctgttcccttcaaaaggatga
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