Paralichthys olivaceus (Japanese flounder): 109628061
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Entry
109628061 CDS
T06037
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04137
Mitophagy - animal
pov04140
Autophagy - animal
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109628061 (hif1a)
04137 Mitophagy - animal
109628061 (hif1a)
04148 Efferocytosis
109628061 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109628061 (hif1a)
Transcription factors [BR:
pov03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109628061 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
109628061
NCBI-ProteinID:
XP_019940496
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSSLDKASIMR
LTISYLRMRKLLTSDEPVAEEETELDIQLNSSYLKALDGFLIVLSEDGDIIYLSENVNKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLIHRTGSKKTKESNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHVRVYDPHTEQTTNGLKEPPVPYLVLICDPVPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFVKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKLILSLEQTEDV
KLVKKEQKQQQQQEEEEMVVVESSSPDMSPTLLKEEEEEEEEEAAKEEEEAAEKGPEPDV
IKLFTQAVEARPLASLYDQLKEKPEALTLLAPAAGDTIISLDFSCPGTVSEMQLLKDVPL
YNDVMLPSSSEKLALPLSPLPPSEPLNTRGGFKSEESKAESYAPAPSTTITCHSSSEGDS
PMDFCFPMDSDMSSDFKLDLVERLFAIDTEPKTPFNTQAMEDLDLEMLAPYIPMDDDFQL
RSLTPEEPLTCGQVKSLKSSPVQVTPEVDSYPSSPFSEVGSSTASPAPLERVSAAHLATI
IAKRTPQLDQEVSLRTLAAQNAQRKRKLGDIREMIGQGNLLEEPLVQGKKRKASGKTTTT
TIFLLPSDLTTCLLGSTSEDTSSLISLPQLTRYDCEVNAPLQGRQYLLQGEELLRALDHV
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagagtgagctcggagaggaggaaggagaag
tcgagggatgcggcgcgatgccggcgtgggaaggagtcggaggtgttctacgagctggcc
cagcaactgcccctgccccacagcgtcagctccagcctggacaaggcctccatcatgagg
ctcaccatcagctatctccgcatgaggaagctgctcacctctgatgagccagtggcagaa
gaggaaactgagctggatatccagctgaacagctcctaccttaaagctctggatggcttc
ctcatagtgctgtctgaagatggagatatcatttatctctctgagaatgtcaacaaatgc
ctcgggctggcacagtttgacctgactggacacagcgtgtttgactttacacatccctgt
gaccaggaggagctgcgggagatgctcatccacagaacaggctctaaaaagaccaaggag
tcaaacacagagcgcagcttcttcctccgaatgaaatgcactctgacgagcaggggccgc
actgtcaatgtcaagtcagcaacatggaaggttctccactgctcaggtcatgttcgtgtt
tatgaccctcacactgaacagactactaatggactgaaggagccacctgtcccctacctg
gttttgatctgtgaccccgtcccccacccctccaacatcgaggtccctctggacaccaag
acctttctcagccgccacacgatggacatgaagttcacgtattgtgatgagaggatcact
gagctcatgggttatgatccagaagaccttttgaatcgttctgtgtacgagtactatcac
gctctggactctgaccatctcaccaagactcaccataacttgtttgtaaagggccaggtc
agcacaggacaataccggatgttggctaagagaggaggctttgtgtgggtggaaacccaa
gccactgtcatctacaacaacaagaactcccaaccacagtgtgttgtctgtgtcaacttt
gtgctcagtggtatccaggaggagaagctgatcttgtctctggagcagactgaggatgtg
aagctggtgaagaaagagcagaagcagcagcagcagcaggaggaggaagaaatggttgta
gtcgagagcagctcgcctgacatgtcaccaactctgctgaaggaggaagaggaggaggaa
gaggaggaggctgcgaaggaggaggaggaggcagcggaaaaaggcccagagcctgatgtg
atcaaactcttcacccaggcggtcgaggcccggccactggcgagcctctacgaccagctg
aaggaaaagcctgaggccctcaccctgctggccccggctgcaggagacacaattatctcc
ctggactttagctgcccaggtacagtttcagagatgcagctgctgaaggacgtccctctc
tacaatgatgtaatgcttccctcctcgagtgagaagctggctctgcctctctcccccctg
ccgcccagcgagcctctcaacaccagaggaggattcaaaagtgaggaatctaaagctgag
agctatgctccagctccgtccactacaataacctgccacagctcctcagagggtgacagt
ccaatggacttctgtttccccatggactcagatatgagctcagacttcaaactagatttg
gtggagaggctatttgccattgacacagagcccaagacccccttcaacacacaggcgatg
gaagacttggatctggagatgttagcgccctacatccccatggatgatgacttccagctg
cgcagtctgaccccagaagagcctctgacctgtggacaagtcaagtccctcaagagttct
ccagtccaagtcacaccggaagtcgacagctaccctagctccccattcagcgaagtagga
agtagcacagcttccccggcaccacttgagcgtgtaagcgctgctcatctcgccaccatc
atcgctaagaggactccacagttggaccaagaagtctcactcagaactctggcggctcag
aacgcacagcgcaaaagaaaactgggagacataagggagatgattggacaaggaaatttg
ctggaggaaccattggtgcaaggaaagaagcggaaagcctccggaaaaacaaccaccacc
accattttcctgctgccttcagacttgacaacttgtctgctgggcagcacgtcagaggac
accagttctcttatcagcctgccgcagctcacccgctacgactgcgaggtcaacgccccc
ctgcagggccgtcagtacctgctgcagggggaggagctgttgcgcgcactggaccacgta
aactga
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