Paralichthys olivaceus (Japanese flounder): 109628092
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Entry
109628092 CDS
T06037
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109628092 (srrm1)
03015 mRNA surveillance pathway
109628092 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109628092 (srrm1)
03041 Spliceosome [BR:
pov03041
]
109628092 (srrm1)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109628092 (srrm1)
Spliceosome [BR:
pov03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109628092 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109628092
NCBI-ProteinID:
XP_019940546
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVVKPWITQRVTEIL
GFEDDVVIEFIFNQLDEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQDNIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDEDKKEKEKENRERAQSKSPRRRKTRSPSPRRR
SPVKRDRKPSPSRSPRRKSSPVGATSPPPPLMQLPTKPLEQLVEPDTSGRSMPEPVVQEA
SSTCDTVLDMVKADSVVEVKEPSPEKIQKKEERPRSREREKESRRERPHHRSRSHSRSRR
RRSRSRSFSPRRRPSPRRRMSPRRRSPPRRGPTGSRHKHRRSPVRRRRSRSASSSGSSSA
HSGSPKKAMKRISSTPPRKQLQHRDTSISPAGKDRRSPSPRGRRGRGSASPPRSSGLKRK
PGGRGDSPPDNAKARHSDGSESEEDKNDKGATADSVQQRRQYRRQNRQSSSDTGSSSSED
EAPKRPTAGPGARNGEVRRRRSRTPSPRRRHRDPSPRKRRSPSPARRRRSPSPPRRRRSP
SPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSSSPAKRPSPGGRRRPSR
SPKRRSSPPQRRRTPPSSSSPSRHRRSPMLPSGWQSRDTRSPPAAANRLSPSPVKRGRAV
RDSTSPQGRFETSSSSPSNQRRQQSPSHSGKPIRRVSRTPEPRSNQRPSPSPQPMRRASS
RSRSVSPQPAAQKRPAPASASPSPSRSASGSPPPAKKASSGSGSQSPSKNSDIDGSGKKK
KKKKEKKHKKEKKHKKHKKHKKEKSGAPGAGEGQENQGVEEDGDSRKESESEVDDSLDDL
EKHLREKALRSMREKGKTQISPSQMS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggcacaagtgcggagcaagacaaccggttcagcaacaag
cacaagaaactgctgaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaggtcgtcaaaccctggatcacccaacgagtgacggagattctg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgatgaaaagcaccca
gatagtaagatgatgcagatcaacctgacaggcttcctgaatgggaagaacgcccgggaa
ttcatgagggacctgtggcccctgctgttgagtgcccaggacaacatcgctggcatcccc
tctgcttttctggaacagaagaaagaggaaattaaacagagacagattgaacaggagaag
ttggcttctcttaagaaggtggacgaggataagaaggaaaaggagaaagaaaacagagag
agggctcagtcaaagagtccaagaagaaggaagacaaggtcaccatcaccacgacgaagg
tcgccagtgaagcgtgacaggaaacctagcccgtcacgctccccacgccgcaaatccagc
ccagttggtgccacttcaccccctccacccttgatgcagctgcccacgaaacctttggag
cagcttgtggagccagatacatcaggaaggtcaatgccagaaccagtcgtccaagaagca
tcttccacctgtgacaccgttttggacatggtgaaagcagactcagtggtggaagtcaag
gaaccctcccctgagaaaattcagaagaaagaggagaggccgcggtctcgggaaagggag
aaggaaagcagacgggaaaggcctcatcaccgctcccgctctcattcccgctcacgcaga
cgacgctcccgttccagatctttttcccctcgccgaaggccgagtcctaggaggagaatg
tctcctcgtcgaaggagtcccccccgacgtggtcccaccggctccagacacaaacacaga
cgctccccagtccgtaggaggcgctctcgctctgcttcatcctccggcagcagctctgca
cattctggctcgcccaaaaaagccatgaaaagaatatctagcacaccacctcgaaaacag
ctgcaacatcgggacacatccattagccctgcagggaaggacagacgctcaccatctccc
agggggagaagaggacggggttcagcttctccacccagatcatctggtttaaagcgaaaa
ccaggaggaaggggggattctccgcctgataatgccaaggccagacattctgatggttct
gagtccgaagaggataaaaatgacaaaggggcaacagcagattcggtgcagcagcgacgt
cagtatcgcaggcagaatcgacagtcttcctcagatactgggtcttcctcctcagaagat
gaagcgccaaaaaggccaacagcagggccaggtgccaggaacggtgaagtcaggaggaga
cgaagccgtacaccttctccaaggaggcgacacagggatccatctccaaggaaaagacgt
tctccatctcctgcgcggagacgtcgctccccttctcccccacgacgccgcagatctccc
tctcctccaagacgcaggtctccttctccaccacctcgccgacgatctccatcccctcga
cgttattctccccctatccagcgtcgctacagcccctcacctttgcctccacagaagagg
aagatgtctagctctcctgcaaagcgcccttccccagggggcaggcgacgtccctccaga
tctcccaagcgcagaagttctcctcctcaaaggagacgcacacctccatcctcctcatca
ccatccagacacaggaggagcccgatgttgccttctggctggcaaagcagggatacacga
tcccctcctgcagcagcaaaccgcctttccccatccccagtaaagcgcggtcgcgctgtc
agagattccactagcccccagggacgtttcgaaacctccagctcatctccatctaaccag
cggagacaacagtccccttcacacagcggcaaaccaatccgcagagtgtcccgcacccca
gagccacgcagcaatcagagaccctctccaagcccccagcctatgaggagagcatcttcc
agatcgagatctgtttcccctcaaccagcagctcagaaacgtccagccccagcatcagcc
tccccctcaccgtcacgctctgccagtggctcccctccaccagccaaaaaggccagcagt
ggatccggcagtcagtccccaagcaagaactctgacattgatggcagtggaaagaaaaag
aagaagaagaaggagaagaaacacaaaaaagagaagaaacataagaaacacaagaagcac
aagaaggagaagagtggtgcccctggtgctggtgaaggtcaagaaaaccagggtgtggag
gaggatggagattcaaggaaggaatcggagagtgaagtagacgacagcctggacgacctg
gagaagcacctaagagagaaggccttgcgctccatgagggagaaggggaagacccagata
tctccatcacaaatgtcctga
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