Paralichthys olivaceus (Japanese flounder): 109628186
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Entry
109628186 CDS
T06037
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109628186 (pnn)
03015 mRNA surveillance pathway
109628186 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109628186 (pnn)
03041 Spliceosome [BR:
pov03041
]
109628186 (pnn)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109628186 (pnn)
Spliceosome [BR:
pov03041
]
Complex C
Other components
EJC/TREX
109628186 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
109628186
NCBI-ProteinID:
XP_019940721
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDDNIRKLTGRDPNESRPGQIRRLGGPMAGVGGGRGRGI
NLLRRSLSEIGSGGPPAKQRDIEGALLRLAGDQRARRDMRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRSEIEQK
LEVQAEAEKKKVENAKKELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYSPGKMCSATQKLLDDSTKKLNVVFEERREAFAEHLIKMESRPRRQPNRDQDGN
TAATGTDHPAEGKPAGQVVKVTGNKGDAEMEEEEEDEEEEEDRGKVREKNEGEEREEEEM
DGLKKAAEEGERMEVSEEGSKEKEDEEEGVNGSGEQGEMGIKEKSPGSEEMEVEGEQGHR
SKEEEGKTDIKQEPTVSKNEKTLDTQFFEPTVASQEAPDTSQQPQPSPSAEEPAEQSSET
TEASHAPKPQTASTIVQQDKITPGLEVQASAAQNQAAEVKAPQGLPDSQEAPSTTSPAPS
KEKDNSGRGRKKEKEQKKGRSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSS
NSSSRSRSRDSGKRKRRPSERGGDRKKGEDRSHRKRGGSSGGGRDSKGSKERRKRREEGR
GRSSRSDREHKDRDRKEKRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggagcttgcaggaccagctcgaaaaagcaaaggaaagcttgaaa
agcgtggacgataatattcgcaaactaaccggacgtgatcccaatgaatcgaggccgggt
cagatccgtcggctcggcggccccatggcaggcgtcgggggaggtagaggcagaggaatc
aacctgctcaggcgcagtctctcagaaattggaagcggcggccctcctgccaagcagagg
gacatcgaaggagccctgctgaggctggcgggggaccagagggccaggagagatatgcgc
cacgacagcgacgctgaggatgacgatgatgtcaaaaagccggcgttgcagtcgtctgtt
gtagctacctccaaggagcgaacacgccgagacctcattcaagatcagaccatggatgag
aggggcaaacagaggaatcggcgtatgtttggcctgttgatggggaccttacaaaagttc
aaacaggagtctaacgtctctacagagaagcaaaagaggcgctcagagatcgagcagaag
ctcgaggttcaggctgaagcagagaaaaaaaaggtggagaatgcaaagaaggagctgttt
gaagagaggagagccaaacagactgagctgagactattggagcagaaggtcgaactagct
cagctgcaagaggagtggaccagccacaacaatcgtctggtgaagtacattcgcactaag
acgaagcctcacattttctattcgcctggaaaaatgtgctccgcaacccagaaactcctc
gatgactccaccaagaaactaaacgttgtgtttgaggagaggcgtgaggcttttgccgaa
cacctcattaagatggaatcccgcccccggcgacagccaaaccgcgaccaggacggcaac
actgcggcaacaggaacggaccacccagcggagggtaagccagcaggtcaggtagtcaag
gttacaggtaacaagggagatgcagagatggaggaggaagaggaagatgaggaggaggag
gaggataggggaaaggtgagggagaagaatgagggggaggagagagaggaagaggagatg
gatgggttgaaaaaggcagctgaagagggagagaggatggaggtaagtgaggagggtagc
aaggagaaggaggacgaagaggagggagttaatggtagtggggagcagggggaaatggga
atcaaggagaaaagtccagggtcagaggagatggaggttgagggggagcaggggcacagg
agtaaggaagaggagggaaaaacagacattaaacaagagcccacagtctccaagaatgaa
aagaccctagacacccagttctttgaaccaactgtcgccagccaagaggcaccagacacc
agtcagcaaccccagcccagtccctctgcagaggagccagcagaacagtcctctgagacc
actgaggcctcacatgccccaaaaccccaaacagcctccaccatagttcagcaggataag
atcacccctggcttagaggtccaggcctcagcagcacagaaccaggctgcagaagtgaaa
gccccacaaggactgcccgattcccaggaggctcccagcaccaccagccctgcaccctcc
aaggagaaagacaacagcgggagagggaggaagaaggaaaaggagcagaagaagggccgc
agtcacagcaacagctcctcctcttcctcctctggctcgtcctccagtggaagctcctcg
tcttcctctggatccagccgctcctcgtcctcctcctcatcatcctcgtcctcatcgtcc
aacagcagcagtcgaagtcgcagccgagacagcggtaagcgcaagaggaggccatctgag
agaggcggggacaggaagaaaggagaagacagaagtcaccgtaagcgaggagggagcagc
ggaggtggaagagactcgaagggatcgaaagagaggaggaagaggagagaggagggcaga
ggcaggtcgtcccggagtgatagggagcataaagatagagacaggaaggaaaagagacgc
taa
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integrated database retrieval system
