Paralichthys olivaceus (Japanese flounder): 109628318
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Entry
109628318 CDS
T06037
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109628318 (zc3h12b)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109628318 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
109628318
NCBI-ProteinID:
XP_019940931
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MTAWSMVEKLKMEKRPCREENIDSSEALHATDESEDGSSSESESEERQRQRAQVNNSSCK
KREPLAVTKPHRQLCRSPCLDRPSFSQSSTAQDFREDETSAGSGIKAASNREYQTKMDFA
LKLGYSGEQVETVLNKLGSAALINDVLAELVRLGNKVEPEIQPCISTATLISRSPGVKEI
ASPEVSVEEESVDTSDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFREKGHKDITV
FVPAWRKEQSRPDAVITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSD
GIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPV
VPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALVKC
GTGPAAAKGDSNTEAKRVAPKRQSDPSIRSVACEPLEALSVIRKSETNSVPSLVSALSVP
TMQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTYGEQF
PKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSD
SFSSYGDLYPSSVDSSLEESMKGQQQSPAQGRMHSFSHGFRHEALTRVQSYGPEEPKQGP
RKQSGSHLAPHLQHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYD
SNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWETPSAAEHQDRYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVT
KLRSCH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcaagcgaggctctgcatgccactgacgagtctgaggatggaagcagctcg
gaaagtgagtcggaagagcggcagcgtcagagggctcaggtgaacaacagcagctgtaaa
aagcgtgaacctttggctgtcacaaaaccccatcgacagctctgtcgatctccatgccta
gacaggcccagtttttcccagagtagcaccgcacaagattttcgtgaggatgagaccagc
gctggatcagggattaaggctgccagcaacagggaataccagacgaagatggattttgct
ctgaagttgggatattcgggagagcaggtggagactgtgctcaacaagttggggtctgca
gctttaattaacgatgttcttgctgagttagttaggctgggaaacaaagtagagcctgag
attcaaccttgcatcagtacagccacactgatatcacggtcccccggtgttaaagagatc
gctagtccagaagtgtcagtggaagaggaatctgtggatacctccgataacctcaggccc
atcgtcattgatggctcaaacgtggcaatgagccatggaaacaaagaggtattctcttgt
cgtggtatccaacttgctgttgagtggtttcgggagaaaggacacaaagacatcactgtg
tttgtcccagcctggaggaaggaacagtcacggcccgatgctgtcatcacagatcaagaa
atattacgcaagctggaaaaagagaagatcttggtttttactccatctcggagagttcaa
ggcagaagggtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgat
ggaattattgtgtcgaatgacaactacagagacttgcaaaatgagaagccagagtggaag
aagttcatagaagagcgtctcctaatgtactcatttgtcaatgacaagtttatgccacct
gatgatccactgggaagacatggtccaagccttgaaaatttcctccgcaaacgtcctgtt
gttccagagcacaaaaaacaaccgtgcccatatggaaaaaagtgcacatatggacataag
tgcaagtactatcatcctgaacgtgtcaaccagccacagcggtcagttgctgatgaacta
cgggcctttgccaaattgtctgcagtgaagacgatgagtgagggggctttagttaaatgc
ggtactggtccggcagctgcaaagggggacagcaacactgaggccaaacgtgtggcccct
aaacgtcagtctgaccccagtattcgttcagtggcctgtgaacctctagaggcactgtcc
gtcattaggaagtctgagacaaattcagtgccttccctcgtgtctgccctcagtgttccc
accatgcagcctgccaagagccacgcagctggggccttgaacacacgatcagccagcagc
ccagtgccgggttctttgcagttcgcacacagttctctggagcacatgtctagtgtacag
taccctcctattttagttactaacagccatggcgcctctgtaacatacggtgaacagttc
cccaagtatgactcagttagcgaccatggatattattcactgcacagtgatttctcaaac
atgagcatgagcagcatgcacaatgttgacagtttctgtagcatggagcacgagcatggt
gtatatcagagaaatcccagccactgccccgaatcctgcctcagccattcaaacagcgac
tcattctcctcctacggggacctgtacccaagctctgtggacagtagcttagaggagagc
atgaaggggcagcagcagtctcctgcacagggtcgcatgcattctttctcccatggtttt
cgccatgaggcgctgaccagggtgcagagttatggaccagaggaacctaagcagggcccc
cgtaagcagtctggatctcatctagcgccacatctccagcatgctgcagtcggagccagg
tccagctgccctggagactatcccctcactcagaatgtcctaccacctctgtcctcacag
cccacacggtctctaggtatgactcgtatggatagtatatcagattcaaggctgtatgat
agtaacccaatgagacagcggcgacctccactgtgtcgtgagcagcatgcaagctgggac
cctctgccttgtggtaatgagtcctatggatatcattcatatccactgagtaacagcctg
atgccgtgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatctgg
aactcgccatgggagaccccatctgcagctgaacaccaagatcggtatgtgatcccagac
caccagtatcaaacatatcggaacctttgtaacatctttcctgcttatgtagttcactca
gtaatggagaagaaccctcatttaacagacccacaacaacttgctgctgttattgttacg
aaactgaggtcatgccactga
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