Paralichthys olivaceus (Japanese flounder): 109628539
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Entry
109628539 CDS
T06037
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04142
Lysosome
pov04144
Endocytosis
pov05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109628539 (cltc)
04142 Lysosome
109628539 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109628539 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109628539 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109628539 (cltc)
Membrane trafficking [BR:
pov04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109628539 (cltc)
Exosome [BR:
pov04147
]
Exosomal proteins
Proteins found in most exosomes
109628539 (cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
109628539
NCBI-ProteinID:
XP_019941213
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQSQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDSAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNSEESTLFCFAVRGQAGGKLHIIEVGTPPTA
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRPHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRASIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLM
ENKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESV
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYTQPPAQPGFGYSM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccagccaacatcggcttcagcacactcaccatggagtcagacaagtttatctgtgtg
cgggagaaggtgggcgagcagtctcaggtggtgatcattgacatggccgacccaaataca
cctatccgcaggcccatctcagctgacagcgccatcatgaatccagccagcaaggtcatt
gcgctcaaagacgccgccaaaaccctgcagattttcaacattgagatgaagagcaagatg
aaggcacacaccatgactgacgatgttaccttctggaagtggatctcccttaacacagtt
gcacttgtgactgacagtgctgtctaccactggagcatggagggtgactcacagcctgtg
aaagtttttgaccgccactccagccttgcaggttgccagatcatcaactaccgcactgac
gctaagcagaaatggctcctgctcatcggcatctcagcccagcaaaatcgggtagtggga
gccatgcagctctactcggttgacagaaaagtttctcagcccatcgaaggccatgctgcc
agctttgctcagttcaagatggagggaaattccgaggagtcaactttgttctgctttgct
gtcagaggccaagctggaggaaagttgcatatcatagaagtggggactccaccaactgcc
aaccagccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaatgac
ttccctgtggccatgcagataagctccaagcaggatgtggttttccttattaccaaatat
ggctacatccacttgtatgacttggagacaggcacctgcatctacatgaaccgcatcagt
ggagagaccatctttgtcaccgctccacatgaggccacctcgggtatcattggggtcaac
aggaaaggacaggtgctgtctgtgtgtgtggaagaggaaaacatcatcccctacatcacc
aacgtcctgcagaatccagacctggctctccgcttagctgtccgcaacaacctcgccggc
gctgaagagctctttgcgcgcaagttcaacaacctttttgctgctggcaactactctgag
gctgccaaagtagctgccaatgcaccaaagggtatccttcgtaccccagacaccatccgt
cgcttccagagtgtgccgactcagccaggccagacctcccccttgctccagtactttggt
atcctgttggaccagggccagctcaacaagttcgagtccctggagctttgcaggcccgtt
ctgcagcaggggcgaaagcaacttctggagaagtggctgaaggaagacaagttggagtgt
tcagaggaacttggtgacctggtgaaggcagtggatcctaccttggctctcagtgtctac
ctgagggccaacgtcccaaacaaagtcattcagtgttttgcagagactggtcagttcccc
aagatcgtcctgtatgccaagaaggtgggctacactccagactggatctttctgctgagg
aatgtgatgcgaatcaacccagaacaaggcctgcagtttgcccagatgcttgttcaggat
gaagagccgctggctgacatcacacagatcgtggatgtgttcatggagtacaacctgatc
cagcagtgcacgtcattcctcctggacgctttgaagaacaacagaccctcagaaggacca
ctgcagactcggctgttggagatgaacctcatgcatgctccacaggttgctgatgctatc
ctaggcaaccaaatgttcaccaactacgatcgtccccacatcgcccagctgtgtgagaag
gctggactcctgcaaagggcgctggagcactacactgacctgtacgacatcaagcgcgct
gttgtgcacacacacctgctcaacccagagtggctggtgaacttctttggctcgctgtca
gtcgaagactctctggagtgcctcagggccatgttgtcagccaacatccgccagaacctg
cagatctgtgtccaggtggcttccaagtaccacgagcagctcagcacacagtccctcact
gagctctttgagtcattcaagagctttgaaggtctgttctacttcctgggctctattgtg
aacttcagtcaggaccctgaagttcacttcaaatacatccaggccgcttgcaagacaggc
cagataaaagaggtggagaggatctgtcgtgagagcaactgctacgaccctgagcgtgtc
aaaaacttccttaaggaagccaaactcaccgaccagctgccgctcatcatcgtctgtgac
cgtttcgactttgtccatgacctggtcctctacctgtatcgcaacaacctgcagaagtac
attgagatctatgttcagaaggtgaaccctagccgtctacctgttgtggttggtggtctg
ttagacgtggactgctcagaggatgtcatcaagagtctgatcctggtcgtcaggggacag
ttttccactgatgaactagttgctgaggttgaaaagagaaacagactgaagctgctgctg
ccatggctggagtctcgtatccatgaaggctgcgaagagccagccacccacaatgccctc
gccaagatctacatcgacagcaacaacaacccagaacgcttcctgcgagaaaacccgttc
tatgacagccgtgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtg
gcctacgagagaggacagtgtgaccaggagctgatcaatgtctgcaatgagaactccctg
ttcaagagcctgtctcgctacttggtccgtcgcaaagatcccgagctgtgggctagcgtg
ctgctcgagagcaacccctacagaagaccactcattgaccaggtggtgcaaacagcactg
tcagaaacccaggacccagaggaggtgtcagtcacagtcaaggccttcatgaccgcagat
ttaccgaatgagctcatcgagctgctggagaagattgtattggacaactccgtcttcagt
gaacacagaaatctgcagaatctgctgatcctcacagcgatcaaagctgaccgcactcgt
gtgatggagtacatcagcaggcttgacaactatgacgctcctgatatcgcaaacatcgcc
atcagcaatgagctctttgaggaggcctttgccatttttaagaagtttgacgtcaacacc
tctgctgtgcaggtgctgatcgagcatattggcaacctggaccgggcctatgagtttgca
gaacgctgcaatgagccagctgtgtggagccagctggctaaggctcagctacagaaaggc
cttgttaaggaggccatcgactcctacatcaaagctgatgacccctctgcgtacatggag
gtggtgcaggctgctgataaaagtggtaactgggaggacctggtcaaatttcttcagatg
gctcgtaagaaggcccgtgagtcctacgttgaaacagagctcatctttgccttggccaaa
accaatcgcctggcagaactggaagagtttattaatggacccaacaatgctcacatccag
caggtcggtgatcgctgctatgatgagaaaatgtacgatgctgctaagctgctgtacaac
aacgtctccaactttggccgtttggcttcgactctcgtgcacctcggggagtaccaggct
gcagtggacggtgcccgtaaggccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggaaaggagttcagactggcccagatgtgtggtctccacattgtagttcac
gctgatgagctggaggagctgatcaactactaccaagaccgcggttactttgaggagctg
atcacaatgctggaagccgccctgggcctggagcgcgctcacatgggaatgttcacggag
ctggccattctttactccaagttcaagccccagaagatgagagagcatctggagctcttt
tggtccagagttaacattccaaaggtgctgagagcagcggagcaggcgcacctgtgggcc
gagctggtcttcctctacgacaagtatgaggagttcgacaacgctatcatcaccatgatg
aaccacccgacggacgcctggaaagagggacagttcaaagacatcatcacaaaggtggcc
aacgtggagctgtactacaaagccacccagttctatctggagtttaagcccttgttactg
aatgatttgctcatagtgctttctcccagactggaccactcccgtgctgtcaacttcttc
agcaaggtgaaacagctgcctctggtcaaaccatacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaatctcttcatcacagaggaggactatcaggca
ctgagagcatcaatagatgcctacgacaactttgacaacatctcgctggcccagcgcttg
gagaagcacgagctgattgagttcaggagaattgccgcctacctcttcaagggcaacaac
cgttggaaacagagtgtggaactttgcaagaaggataagctctataaggatgccatgcag
tatgcatcagagtccaaggacacagagctggcagaggagctgctgtcctggttcctaatg
gagaacaagaaggagtgtttcgccgcctgcctgtttacctgctatgacctgctgcggcct
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggaatacctcagcaaggtagataaactagaaacctcagagtctgta
aggaaagaggaggagcaagcaacagagacgcaacccatcgtctatggcacaccacagctg
atgctgacagccggccccagcgtacccgtggcccctcagcaggcctatggttacggctac
caggcacctgcaggatacactcagccaccagctcagccgggcttcggctacagcatgtaa
DBGET
integrated database retrieval system
